| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is yheT [H]
Identifier: 33863433
GI number: 33863433
Start: 1254979
End: 1256091
Strand: Reverse
Name: yheT [H]
Synonym: PMT1163
Alternate gene names: 33863433
Gene position: 1256091-1254979 (Counterclockwise)
Preceding gene: 33863434
Following gene: 33863430
Centisome position: 52.1
GC content: 58.76
Gene sequence:
>1113_bases GTGTTGGCAAGAAGGGGTGAACCCCATCCCGAGCTGCTTCAGCAGCTCGGGATGCCTTCTTTTAGACAGAGATTGCCTTG GCTTGGCGGTGATTTGCAGACCCTCAGGGACACCCTGAGACCGGTGCGCTTGCCGAGTGATCGAGGCGAAGCGATTGAAA TTGCAGTACCTGCCTTGCCGAGCGGTATGGCGGGTTCGGGTCATTTATTGGCTTTGTTTGATCGCCCGCAAAGCACCCGC CAGGCGCGTGGCTTGGTTTTGCTGCTGCATGGATTGGGGGGCTCTAGTCGACGTGAAGGTCTACGACGCATGGCCTGCGC TCTTCAGACGGCTGGTTTCGCTGTGCTGCGTTTGAATTTGCGTGGTGCAGAACCTGGCCGGCATCTCTCAGCAGGGACCT ATGCCGCTGACTGCAACAGCGATCTTGGCCCGGTGTTGTTACGGGCCAGGCAGCTCTGTGATCAGCTGGGGCGCGAGGGT GTTGCTTCGAGAGGGGCAGTCCCTCTGCTTGGGGCCGGTATTTCCCTTGGGGGCACGATGCTTCTCAATGCCTGTCTTGA GCCAAGCCACGCGCGCGCGCCTGGCCAAGCGGTTTTGGATGGATTGGTTTGTACCAGTAGTCCCCTTGATTTAGCGGCTT GCAGTGCCTCAATCGAGCGTCCCCGCAATAGGGTTTATCAGCGTTGGTTGCTGCAGCGATTGATTCGTCAAACCTTGGCG GATCCCTTCGGCGTGACTGTGCAGGAAAGGGGAGTGCTCAATGGGGAGAAGGGTCAGAGCCCGCCAGCAACGATCCGAGA GTTTGATGCTGCCATCACAGCACCGCGCTGGGGTTATGGCGATGTTGATGCTTACTACGCTGGCGCCTCACCTTTGAGCG CCTTGCTTGAGAACCCCAGTCGCCTGCCGCCAACACTGCTCCTGCAAGCGCTAGATGATCCCTGGGTGCCAGCAGAAGCC GCTCAACAGTTGGCAGCGAATATGTCTCCATCCAGTGAGCAGCGAATCCAAGTGTTGTTGACAGCTCACGGCGGCCACAA TGGTTTCCATGCCATCGGAGGCTGCTGGGGGGATCAGGTGGTGGCCCGTTGGCTGTCAAAGTTTGGAGCTTGA
Upstream 100 bases:
>100_bases GGGATTAAGAATGATCTGTTTGAACTTGCCAATACTTCCATGGTGTTTGGTGATGCCAAGAAAGTGTTGGGTGATCTTTT GGTTGAACTAAAGGAGCTTG
Downstream 100 bases:
>100_bases CTAAAAACCCAGTAAAAATTCAGGGATGTCTCTGCTGCTGAGGGGTCCGGCGAATGATCCAGGCTTCGATTGGTTGGCCG CCAAGCACATGCTCTTTCAC
Product: hydrolase of the alpha/beta-hydrolase fold
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MLARRGEPHPELLQQLGMPSFRQRLPWLGGDLQTLRDTLRPVRLPSDRGEAIEIAVPALPSGMAGSGHLLALFDRPQSTR QARGLVLLLHGLGGSSRREGLRRMACALQTAGFAVLRLNLRGAEPGRHLSAGTYAADCNSDLGPVLLRARQLCDQLGREG VASRGAVPLLGAGISLGGTMLLNACLEPSHARAPGQAVLDGLVCTSSPLDLAACSASIERPRNRVYQRWLLQRLIRQTLA DPFGVTVQERGVLNGEKGQSPPATIREFDAAITAPRWGYGDVDAYYAGASPLSALLENPSRLPPTLLLQALDDPWVPAEA AQQLAANMSPSSEQRIQVLLTAHGGHNGFHAIGGCWGDQVVARWLSKFGA
Sequences:
>Translated_370_residues MLARRGEPHPELLQQLGMPSFRQRLPWLGGDLQTLRDTLRPVRLPSDRGEAIEIAVPALPSGMAGSGHLLALFDRPQSTR QARGLVLLLHGLGGSSRREGLRRMACALQTAGFAVLRLNLRGAEPGRHLSAGTYAADCNSDLGPVLLRARQLCDQLGREG VASRGAVPLLGAGISLGGTMLLNACLEPSHARAPGQAVLDGLVCTSSPLDLAACSASIERPRNRVYQRWLLQRLIRQTLA DPFGVTVQERGVLNGEKGQSPPATIREFDAAITAPRWGYGDVDAYYAGASPLSALLENPSRLPPTLLLQALDDPWVPAEA AQQLAANMSPSSEQRIQVLLTAHGGHNGFHAIGGCWGDQVVARWLSKFGA >Mature_370_residues MLARRGEPHPELLQQLGMPSFRQRLPWLGGDLQTLRDTLRPVRLPSDRGEAIEIAVPALPSGMAGSGHLLALFDRPQSTR QARGLVLLLHGLGGSSRREGLRRMACALQTAGFAVLRLNLRGAEPGRHLSAGTYAADCNSDLGPVLLRARQLCDQLGREG VASRGAVPLLGAGISLGGTMLLNACLEPSHARAPGQAVLDGLVCTSSPLDLAACSASIERPRNRVYQRWLLQRLIRQTLA DPFGVTVQERGVLNGEKGQSPPATIREFDAAITAPRWGYGDVDAYYAGASPLSALLENPSRLPPTLLLQALDDPWVPAEA AQQLAANMSPSSEQRIQVLLTAHGGHNGFHAIGGCWGDQVVARWLSKFGA
Specific function: Unknown
COG id: COG0429
COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. AB hydrolase 4 family [H]
Homologues:
Organism=Homo sapiens, GI23397663, Length=294, Percent_Identity=28.2312925170068, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI194578891, Length=289, Percent_Identity=29.757785467128, Blast_Score=75, Evalue=1e-13, Organism=Escherichia coli, GI1789752, Length=301, Percent_Identity=30.5647840531561, Blast_Score=85, Evalue=6e-18, Organism=Saccharomyces cerevisiae, GI6319655, Length=307, Percent_Identity=26.7100977198697, Blast_Score=74, Evalue=3e-14, Organism=Drosophila melanogaster, GI24652003, Length=295, Percent_Identity=30.8474576271186, Blast_Score=88, Evalue=9e-18, Organism=Drosophila melanogaster, GI281398151, Length=295, Percent_Identity=30.8474576271186, Blast_Score=87, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012020 - InterPro: IPR000073 - InterPro: IPR000952 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 39510; Mature: 39510
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLARRGEPHPELLQQLGMPSFRQRLPWLGGDLQTLRDTLRPVRLPSDRGEAIEIAVPALP CCCCCCCCCHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCC SGMAGSGHLLALFDRPQSTRQARGLVLLLHGLGGSSRREGLRRMACALQTAGFAVLRLNL CCCCCCCCEEEEECCCCHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEEEE RGAEPGRHLSAGTYAADCNSDLGPVLLRARQLCDQLGREGVASRGAVPLLGAGISLGGTM CCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHH LLNACLEPSHARAPGQAVLDGLVCTSSPLDLAACSASIERPRNRVYQRWLLQRLIRQTLA HHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DPFGVTVQERGVLNGEKGQSPPATIREFDAAITAPRWGYGDVDAYYAGASPLSALLENPS CCCCCEEHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHCCCC RLPPTLLLQALDDPWVPAEAAQQLAANMSPSSEQRIQVLLTAHGGHNGFHAIGGCWGDQV CCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCHHHCCCHHHHH VARWLSKFGA HHHHHHHHCC >Mature Secondary Structure MLARRGEPHPELLQQLGMPSFRQRLPWLGGDLQTLRDTLRPVRLPSDRGEAIEIAVPALP CCCCCCCCCHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCC SGMAGSGHLLALFDRPQSTRQARGLVLLLHGLGGSSRREGLRRMACALQTAGFAVLRLNL CCCCCCCCEEEEECCCCHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEEEE RGAEPGRHLSAGTYAADCNSDLGPVLLRARQLCDQLGREGVASRGAVPLLGAGISLGGTM CCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHH LLNACLEPSHARAPGQAVLDGLVCTSSPLDLAACSASIERPRNRVYQRWLLQRLIRQTLA HHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DPFGVTVQERGVLNGEKGQSPPATIREFDAAITAPRWGYGDVDAYYAGASPLSALLENPS CCCCCEEHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHCCCC RLPPTLLLQALDDPWVPAEAAQQLAANMSPSSEQRIQVLLTAHGGHNGFHAIGGCWGDQV CCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCHHHCCCHHHHH VARWLSKFGA HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]