| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349735
Identifier: 29349735
GI number: 29349735
Start: 5699823
End: 5701370
Strand: Reverse
Name: 29349735
Synonym: BT_4327
Alternate gene names: NA
Gene position: 5701370-5699823 (Counterclockwise)
Preceding gene: 29349736
Following gene: 29349734
Centisome position: 91.07
GC content: 45.09
Gene sequence:
>1548_bases ATGGCAAAGAAAATGATCTCACGGCTCTCGGTACTGGCAGTACTGATTGTGTTTCTGGCAGCATGTTCCAAACAAACGGA ATATACGAACGTAATACCGGCAGACGCTACGGCTGTTGCCTCTATTGATTTGAAATCACTGGCCAACAAAGCCGGAATGA ACGACAAAGAAAATGAAGCTGCTAAACAGAAACTGCTGGAAGCAATGAAAAGCGGGATGAATGCTGCCACTTTCCAACAG TTGGAGAAGGTGATCAACAATCCGGGAGCATCCGGTCTGGATCCGGAAGCACCGATCTATATCTTTAGCTCTCCCCAAAT TTCCGGTGGTGCATTCGTTGCCAAAGTCAGCAATGAAGACGATTTGCACGCTTCCCTCGATGTGATGGCAAAAGAACAAA TCTGCCAGCCGGTCAGCGAAGCGGACGGATATAGCTTCACTACCCTGAACGGAAACTTGCTTGCTTTCAATGAAACCACT GCAATCATTATCTCTGCCAGCAGAACTTCTCAGACAGAAGCAGCCAAAGAAGCCATCACCAAACTAATGAAACAGACTGC CGACAACAGCATTGCGAAATCCGGAGCCTTCCAGAAAATAGCCAAGCAAAAGAGTGATATCAACTTCTTCGCCTCCATGT CAGCAATCCCTTCTACTTACAGAAGCCAGATCAGCATGGGACTTCCTTCTGAAATCAAACCGGAAGACATTACCATCCTA GGCGGACTGAACTTCGAAAAAGGCAAGATCGCCCTTAAAACAGAAAACTACACGGAGAACGACGCCGTCAAAGCGCTTCT GAAAAAACAAATGGAATCATTTGGAAAGACAAACGGCACATTCGTGAAATACTTTCCGGCATCTACGCTGATGTTCATCA ATATGGGCGTAAAAGGAGACGGACTTTACAATCTGTTGAGTGAGAATAAAGAATTCCGCAGCACTGTGTCTATCGCCAAA GCGGATGAAGTAAAAGAACTGTTCAGTTCATTCAACGGCGATATCTCTGCCGGGCTGATCAATGTAACCATGAACAGTGC CCCTACTTTTCTTGCTTATGCTGATGTAAAGAATGGGAATGCTCTTGAAGCTCTTTACAAGAACAAGCAGTCACTGGGCA TGAGAAAAGGAGAAGACATCATGGAACTGGGCAAAGACGAGTATGTCTACAAAACAAGAGGCATGAATATATTTTTCGGC ATCAAGGACAAACAGATGTATGCTACCAATGACGAACTGCTCTACAAGAGCATTGGCAAAACGGTTGACAAATCGATCAA AGACGCTCCTTACGCAGCAGACATGAAAGGCAAGACCGTATTTATGGCCATCAATGCAGAAGCCATACTGGATTTACCGG TCGTAAAGATGCTGGTAGGCTTCGGAGGCAAGGAGTTCAAGACTTATTCTGATCTCGCTTCCAAAGTTTCTTATTTATCC GTTAGTTCGGAAGGAGAAACAAGCGAAACAGACCTTTGCCTGAAAGACAAAGATGTCAATGCCCTCAAACAAATCGTAGA TTTTGCCAAGCAATTCGCCGGCATGTAA
Upstream 100 bases:
>100_bases CAGCTTGGGTAAATCACGGCTTCGGACAGAGACAGCGGCACTCGTGGCTTGCCACACAATGAACTTATTGAACCAATAAT AACTTTTAAATAGTATGAGT
Downstream 100 bases:
>100_bases TTCGTCAATGAACGGCATGAATAGTATTCACTTACAGCAAACACTTCCCCAAGTGTTTGCTGACCGTAATTCGGTGACCT CTGATGTATGGCATCAGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 515; Mature: 514
Protein sequence:
>515_residues MAKKMISRLSVLAVLIVFLAACSKQTEYTNVIPADATAVASIDLKSLANKAGMNDKENEAAKQKLLEAMKSGMNAATFQQ LEKVINNPGASGLDPEAPIYIFSSPQISGGAFVAKVSNEDDLHASLDVMAKEQICQPVSEADGYSFTTLNGNLLAFNETT AIIISASRTSQTEAAKEAITKLMKQTADNSIAKSGAFQKIAKQKSDINFFASMSAIPSTYRSQISMGLPSEIKPEDITIL GGLNFEKGKIALKTENYTENDAVKALLKKQMESFGKTNGTFVKYFPASTLMFINMGVKGDGLYNLLSENKEFRSTVSIAK ADEVKELFSSFNGDISAGLINVTMNSAPTFLAYADVKNGNALEALYKNKQSLGMRKGEDIMELGKDEYVYKTRGMNIFFG IKDKQMYATNDELLYKSIGKTVDKSIKDAPYAADMKGKTVFMAINAEAILDLPVVKMLVGFGGKEFKTYSDLASKVSYLS VSSEGETSETDLCLKDKDVNALKQIVDFAKQFAGM
Sequences:
>Translated_515_residues MAKKMISRLSVLAVLIVFLAACSKQTEYTNVIPADATAVASIDLKSLANKAGMNDKENEAAKQKLLEAMKSGMNAATFQQ LEKVINNPGASGLDPEAPIYIFSSPQISGGAFVAKVSNEDDLHASLDVMAKEQICQPVSEADGYSFTTLNGNLLAFNETT AIIISASRTSQTEAAKEAITKLMKQTADNSIAKSGAFQKIAKQKSDINFFASMSAIPSTYRSQISMGLPSEIKPEDITIL GGLNFEKGKIALKTENYTENDAVKALLKKQMESFGKTNGTFVKYFPASTLMFINMGVKGDGLYNLLSENKEFRSTVSIAK ADEVKELFSSFNGDISAGLINVTMNSAPTFLAYADVKNGNALEALYKNKQSLGMRKGEDIMELGKDEYVYKTRGMNIFFG IKDKQMYATNDELLYKSIGKTVDKSIKDAPYAADMKGKTVFMAINAEAILDLPVVKMLVGFGGKEFKTYSDLASKVSYLS VSSEGETSETDLCLKDKDVNALKQIVDFAKQFAGM >Mature_514_residues AKKMISRLSVLAVLIVFLAACSKQTEYTNVIPADATAVASIDLKSLANKAGMNDKENEAAKQKLLEAMKSGMNAATFQQL EKVINNPGASGLDPEAPIYIFSSPQISGGAFVAKVSNEDDLHASLDVMAKEQICQPVSEADGYSFTTLNGNLLAFNETTA IIISASRTSQTEAAKEAITKLMKQTADNSIAKSGAFQKIAKQKSDINFFASMSAIPSTYRSQISMGLPSEIKPEDITILG GLNFEKGKIALKTENYTENDAVKALLKKQMESFGKTNGTFVKYFPASTLMFINMGVKGDGLYNLLSENKEFRSTVSIAKA DEVKELFSSFNGDISAGLINVTMNSAPTFLAYADVKNGNALEALYKNKQSLGMRKGEDIMELGKDEYVYKTRGMNIFFGI KDKQMYATNDELLYKSIGKTVDKSIKDAPYAADMKGKTVFMAINAEAILDLPVVKMLVGFGGKEFKTYSDLASKVSYLSV SSEGETSETDLCLKDKDVNALKQIVDFAKQFAGM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55877; Mature: 55745
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKMISRLSVLAVLIVFLAACSKQTEYTNVIPADATAVASIDLKSLANKAGMNDKENEA CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEHHHHHHHHHHCCCCCCHHHH AKQKLLEAMKSGMNAATFQQLEKVINNPGASGLDPEAPIYIFSSPQISGGAFVAKVSNED HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCC DLHASLDVMAKEQICQPVSEADGYSFTTLNGNLLAFNETTAIIISASRTSQTEAAKEAIT CHHHHHHHHHHHHHHCCHHHCCCCEEEEECCCEEEECCCEEEEEEECCCCHHHHHHHHHH KLMKQTADNSIAKSGAFQKIAKQKSDINFFASMSAIPSTYRSQISMGLPSEIKPEDITIL HHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE GGLNFEKGKIALKTENYTENDAVKALLKKQMESFGKTNGTFVKYFPASTLMFINMGVKGD ECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEECCCCCC GLYNLLSENKEFRSTVSIAKADEVKELFSSFNGDISAGLINVTMNSAPTFLAYADVKNGN HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEECEEEEEEECCCCCEEEEEECCCCC ALEALYKNKQSLGMRKGEDIMELGKDEYVYKTRGMNIFFGIKDKQMYATNDELLYKSIGK HHHHHHHCHHHCCCCCCCHHHHCCCCCEEEEECCCEEEEEECCCEEEECCHHHHHHHHHH TVDKSIKDAPYAADMKGKTVFMAINAEAILDLPVVKMLVGFGGKEFKTYSDLASKVSYLS HHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEE VSSEGETSETDLCLKDKDVNALKQIVDFAKQFAGM ECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure AKKMISRLSVLAVLIVFLAACSKQTEYTNVIPADATAVASIDLKSLANKAGMNDKENEA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEHHHHHHHHHHCCCCCCHHHH AKQKLLEAMKSGMNAATFQQLEKVINNPGASGLDPEAPIYIFSSPQISGGAFVAKVSNED HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCC DLHASLDVMAKEQICQPVSEADGYSFTTLNGNLLAFNETTAIIISASRTSQTEAAKEAIT CHHHHHHHHHHHHHHCCHHHCCCCEEEEECCCEEEECCCEEEEEEECCCCHHHHHHHHHH KLMKQTADNSIAKSGAFQKIAKQKSDINFFASMSAIPSTYRSQISMGLPSEIKPEDITIL HHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE GGLNFEKGKIALKTENYTENDAVKALLKKQMESFGKTNGTFVKYFPASTLMFINMGVKGD ECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEECCCCCC GLYNLLSENKEFRSTVSIAKADEVKELFSSFNGDISAGLINVTMNSAPTFLAYADVKNGN HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEECEEEEEEECCCCCEEEEEECCCCC ALEALYKNKQSLGMRKGEDIMELGKDEYVYKTRGMNIFFGIKDKQMYATNDELLYKSIGK HHHHHHHCHHHCCCCCCCHHHHCCCCCEEEEECCCEEEEEECCCEEEECCHHHHHHHHHH TVDKSIKDAPYAADMKGKTVFMAINAEAILDLPVVKMLVGFGGKEFKTYSDLASKVSYLS HHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEE VSSEGETSETDLCLKDKDVNALKQIVDFAKQFAGM ECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA