| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349702
Identifier: 29349702
GI number: 29349702
Start: 5656890
End: 5657591
Strand: Reverse
Name: 29349702
Synonym: BT_4294
Alternate gene names: NA
Gene position: 5657591-5656890 (Counterclockwise)
Preceding gene: 29349703
Following gene: 29349701
Centisome position: 90.37
GC content: 40.6
Gene sequence:
>702_bases ATGAAACCCAAGAAATTAAGCCTCTTATTAACTATCTTGCCAATGATTATTGCAGCTACAGGTTGCCATTCCCAGCAAGA GTCTAAAGTAGACATCACTCCTCATTGTATCAATCTTCAGGCAGACAGCCTCTACCGGCAAGCAATGACATTAATGGAAT CTTCTTGCGATGTAGACTCCACCCGAAAATGCATCCGCTTTCTGGACAAAGCTTTGGCAATCGACAGTTTAAATCCCGAC TATTACGGCATGAAAGCCAAACTTTTATCTGAAATGGGAGAACTGGACTCCGCCCTATACATACAAACACTTGCTATGGA GAAAAACGCAATTACCGGTGAGTATCTGTTCCAACTGGGACTACTTCAAGCTGCCAAAGATATGCACGCTGAAGCTCACG AAAGTTTTGGAAAAAGCAAGGTCTTCCTTCAAGCAGTACTAAAACAATATCCCGACAGCTTGGGAGCTTTTATTCTGGCA GAAGCTGCCAATTCTCTCTACGAAAATAAAGATTCACTTTTCATGAGAAATATAGATGAAATCCGTAAACGCTTTCCCGA AAGGTTGCTGGAAATAGAGATGACCCGAAGGGTGAAACCGCATTCATTGGTCAATCAAATAAGAAGGATTAAAATAGAAA AGGATTATAATATTGATTTTGATATGGATAGTCTGGTTGAGGCGACTGTGAATAAAGACTAA
Upstream 100 bases:
>100_bases ACTGACGAAGAACAAAATAAGATCAGATTAGACACATTTTCTTATCGAGTTCTTCGCCAGTCTTACTTTTTTATAAAATT GGATGATAAGAATTATGAAT
Downstream 100 bases:
>100_bases GTTCCAACTTTCCTCCCCTTTTCTTTGTTCTTTCAGCCGGAATAGATTACTTTTGTCTTATTCCGTGAGCAATGAACTAA AATAACAGGAAATATGATAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MKPKKLSLLLTILPMIIAATGCHSQQESKVDITPHCINLQADSLYRQAMTLMESSCDVDSTRKCIRFLDKALAIDSLNPD YYGMKAKLLSEMGELDSALYIQTLAMEKNAITGEYLFQLGLLQAAKDMHAEAHESFGKSKVFLQAVLKQYPDSLGAFILA EAANSLYENKDSLFMRNIDEIRKRFPERLLEIEMTRRVKPHSLVNQIRRIKIEKDYNIDFDMDSLVEATVNKD
Sequences:
>Translated_233_residues MKPKKLSLLLTILPMIIAATGCHSQQESKVDITPHCINLQADSLYRQAMTLMESSCDVDSTRKCIRFLDKALAIDSLNPD YYGMKAKLLSEMGELDSALYIQTLAMEKNAITGEYLFQLGLLQAAKDMHAEAHESFGKSKVFLQAVLKQYPDSLGAFILA EAANSLYENKDSLFMRNIDEIRKRFPERLLEIEMTRRVKPHSLVNQIRRIKIEKDYNIDFDMDSLVEATVNKD >Mature_233_residues MKPKKLSLLLTILPMIIAATGCHSQQESKVDITPHCINLQADSLYRQAMTLMESSCDVDSTRKCIRFLDKALAIDSLNPD YYGMKAKLLSEMGELDSALYIQTLAMEKNAITGEYLFQLGLLQAAKDMHAEAHESFGKSKVFLQAVLKQYPDSLGAFILA EAANSLYENKDSLFMRNIDEIRKRFPERLLEIEMTRRVKPHSLVNQIRRIKIEKDYNIDFDMDSLVEATVNKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26529; Mature: 26529
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPKKLSLLLTILPMIIAATGCHSQQESKVDITPHCINLQADSLYRQAMTLMESSCDVDS CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCHH TRKCIRFLDKALAIDSLNPDYYGMKAKLLSEMGELDSALYIQTLAMEKNAITGEYLFQLG HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LLQAAKDMHAEAHESFGKSKVFLQAVLKQYPDSLGAFILAEAANSLYENKDSLFMRNIDE HHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH IRKRFPERLLEIEMTRRVKPHSLVNQIRRIKIEKDYNIDFDMDSLVEATVNKD HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure MKPKKLSLLLTILPMIIAATGCHSQQESKVDITPHCINLQADSLYRQAMTLMESSCDVDS CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCHH TRKCIRFLDKALAIDSLNPDYYGMKAKLLSEMGELDSALYIQTLAMEKNAITGEYLFQLG HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LLQAAKDMHAEAHESFGKSKVFLQAVLKQYPDSLGAFILAEAANSLYENKDSLFMRNIDE HHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH IRKRFPERLLEIEMTRRVKPHSLVNQIRRIKIEKDYNIDFDMDSLVEATVNKD HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA