| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29349701
Identifier: 29349701
GI number: 29349701
Start: 5655051
End: 5656796
Strand: Reverse
Name: 29349701
Synonym: BT_4293
Alternate gene names: NA
Gene position: 5656796-5655051 (Counterclockwise)
Preceding gene: 29349702
Following gene: 29349699
Centisome position: 90.36
GC content: 43.24
Gene sequence:
>1746_bases ATGATAGAAGATGTGAAAAGAATCCCATATGGAGTTTCCAATTTCGTGGAAGTGGTAGAGCAGAATCAATATTATGTAGA TAAGACCATGTATCTGCCTCTGCTGGAACAGCAGCCCAACAGTCTATTCTTTATCCGCCCCCGGCGTTTCGGCAAAAGTA TCTTCCTGAGCATGCTTCGCACCTATTATGATATTTCGCAAAAAGAAAAGTTTCAGAAACGCTTTGGTAATTTGTGGATA GGCAGTCAGCCAACTCCCCTACAGGGAACTTTTCAGATACTTTTTCTTGATTTCTCACGCATAGGCGGAATCGACGGTAC ATTGGCACAGAACTTTGACGATTATTGCTGCGGTGGATTGGATGACTTCGCATCCATTTATGAACCATACTATTATCCGG GATTTGCATTAGAAATGAAGCAACTGGAAGGTTCCACCAATAAGCTGAATTTTCTGGATCGAAAAGCCCGCAACAATGGT TCCCATCTCTATCTGATTATTGACGAATATGACAACTTCACCAACGTGGTTCTGAACGAACAAGGTAATGAAATCTATCA TGCCCTGACTCACGCCAGCGGATTCTACCGGGAGATTTTCAAAAAGTTTAAAGGAATGTTCGAACGCATCTTCATGACAG GTGTCAGCCCCGTTACATTGGATGATCTCACCAGCGGATTCAATATCGGCTGGAACATCAGCACCGATTTCCAATTCAAT ATGATGCTGGGATTCAGTGAGACAGATGTGCGGACCATGTTTCAGTACTATAAAGACGCCGGACAACTGCCGGCAGATAC AGACATAGATGCACTGATTCGGGAAATAAAACCGTGGTATGACAATTATTGCTTTGCCAAAGAAAGTCTGGAACGTGATC CGAAGATGTTCAACTGCGACATGGTACTTTATTATCTGCGTCATTACATAACGTTGGGGAAATCTCCCGAACAAATGATT GACCCTAATACCCGCACGGATTACAATAAAATGAAAAAACTGATCCGATTGGACAAGCTCGACGGAAATCGTAAAGGTGT GTTGCGCAAAATCACCGAAGAAGGAGAAGTCATCACCAACTTAGTGACAACCTTCCCCGCCAGCGAAATAGCCAATCCGG AAATCTTTCCCAGCCTGCTCTTTTATTATGGCATGCTGACCATTACCGGTACACGAGGAGTCCGCCTGATACTGGGTATT CCCAACAATAATGTACGCAAGCAGTATTACGATTTTCTGTTAGAGGAATATCAAGAGAAACGGCATATTGACTTGAATGG CTTAAGAGATTTATTTGATGACATGGCATTCGACGGTCACTGGCAAAAATCTTTAGAGTTCATCGCTCATGCCTACAAGG AAAACTCCTCAGTACGTAGTGCGATTGAAGGCGAACGGAATATTCAAGGATTCTTTACTGCCTACCTGAGCGTAAATGCT TATTACCTGACTGCCCCGGAAGTGGAACTGAATCACGGTTACTGTGACCTGTTCCTTATGCCGGACCTACTGCATTATGA AGTGAATCATAGCTACATCATAGAGCTAAAATACCTTTCAGAAAAAGATTCCGATGCGAAAGCCGAAATCCAATGGGAAG AAGCCGTTGAGCAGATAAAGGGATATGCAGCCGCACCGAAAGTTCGCCAATTGATACAGAATACAAAGTTACATTGCATT GTGATGCAATTCCGTGGCTGGGAACTCCAACGAATGGAAGAAGTAATTCAACCACATATAAAATGA
Upstream 100 bases:
>100_bases AGACTAAGTTCCAACTTTCCTCCCCTTTTCTTTGTTCTTTCAGCCGGAATAGATTACTTTTGTCTTATTCCGTGAGCAAT GAACTAAAATAACAGGAAAT
Downstream 100 bases:
>100_bases CAGCACTTTTGCCCTCACGCTCTCATTTTCGCCTCAATCCCCCTATTCATCGGAGTTACAGCGATTAGAGATCCAATGGT AGCAGCGTGAGAGCAACCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 581; Mature: 581
Protein sequence:
>581_residues MIEDVKRIPYGVSNFVEVVEQNQYYVDKTMYLPLLEQQPNSLFFIRPRRFGKSIFLSMLRTYYDISQKEKFQKRFGNLWI GSQPTPLQGTFQILFLDFSRIGGIDGTLAQNFDDYCCGGLDDFASIYEPYYYPGFALEMKQLEGSTNKLNFLDRKARNNG SHLYLIIDEYDNFTNVVLNEQGNEIYHALTHASGFYREIFKKFKGMFERIFMTGVSPVTLDDLTSGFNIGWNISTDFQFN MMLGFSETDVRTMFQYYKDAGQLPADTDIDALIREIKPWYDNYCFAKESLERDPKMFNCDMVLYYLRHYITLGKSPEQMI DPNTRTDYNKMKKLIRLDKLDGNRKGVLRKITEEGEVITNLVTTFPASEIANPEIFPSLLFYYGMLTITGTRGVRLILGI PNNNVRKQYYDFLLEEYQEKRHIDLNGLRDLFDDMAFDGHWQKSLEFIAHAYKENSSVRSAIEGERNIQGFFTAYLSVNA YYLTAPEVELNHGYCDLFLMPDLLHYEVNHSYIIELKYLSEKDSDAKAEIQWEEAVEQIKGYAAAPKVRQLIQNTKLHCI VMQFRGWELQRMEEVIQPHIK
Sequences:
>Translated_581_residues MIEDVKRIPYGVSNFVEVVEQNQYYVDKTMYLPLLEQQPNSLFFIRPRRFGKSIFLSMLRTYYDISQKEKFQKRFGNLWI GSQPTPLQGTFQILFLDFSRIGGIDGTLAQNFDDYCCGGLDDFASIYEPYYYPGFALEMKQLEGSTNKLNFLDRKARNNG SHLYLIIDEYDNFTNVVLNEQGNEIYHALTHASGFYREIFKKFKGMFERIFMTGVSPVTLDDLTSGFNIGWNISTDFQFN MMLGFSETDVRTMFQYYKDAGQLPADTDIDALIREIKPWYDNYCFAKESLERDPKMFNCDMVLYYLRHYITLGKSPEQMI DPNTRTDYNKMKKLIRLDKLDGNRKGVLRKITEEGEVITNLVTTFPASEIANPEIFPSLLFYYGMLTITGTRGVRLILGI PNNNVRKQYYDFLLEEYQEKRHIDLNGLRDLFDDMAFDGHWQKSLEFIAHAYKENSSVRSAIEGERNIQGFFTAYLSVNA YYLTAPEVELNHGYCDLFLMPDLLHYEVNHSYIIELKYLSEKDSDAKAEIQWEEAVEQIKGYAAAPKVRQLIQNTKLHCI VMQFRGWELQRMEEVIQPHIK >Mature_581_residues MIEDVKRIPYGVSNFVEVVEQNQYYVDKTMYLPLLEQQPNSLFFIRPRRFGKSIFLSMLRTYYDISQKEKFQKRFGNLWI GSQPTPLQGTFQILFLDFSRIGGIDGTLAQNFDDYCCGGLDDFASIYEPYYYPGFALEMKQLEGSTNKLNFLDRKARNNG SHLYLIIDEYDNFTNVVLNEQGNEIYHALTHASGFYREIFKKFKGMFERIFMTGVSPVTLDDLTSGFNIGWNISTDFQFN MMLGFSETDVRTMFQYYKDAGQLPADTDIDALIREIKPWYDNYCFAKESLERDPKMFNCDMVLYYLRHYITLGKSPEQMI DPNTRTDYNKMKKLIRLDKLDGNRKGVLRKITEEGEVITNLVTTFPASEIANPEIFPSLLFYYGMLTITGTRGVRLILGI PNNNVRKQYYDFLLEEYQEKRHIDLNGLRDLFDDMAFDGHWQKSLEFIAHAYKENSSVRSAIEGERNIQGFFTAYLSVNA YYLTAPEVELNHGYCDLFLMPDLLHYEVNHSYIIELKYLSEKDSDAKAEIQWEEAVEQIKGYAAAPKVRQLIQNTKLHCI VMQFRGWELQRMEEVIQPHIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018631 - InterPro: IPR012547 [H]
Pfam domain/function: PF09820 AAA-ATPase_like; PF08011 DUF1703 [H]
EC number: NA
Molecular weight: Translated: 68016; Mature: 68016
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEDVKRIPYGVSNFVEVVEQNQYYVDKTMYLPLLEQQPNSLFFIRPRRFGKSIFLSMLR CCCCCHHCCCCHHHHHHHHHCCCEEECCEEEEEHHHCCCCCEEEECCHHHHHHHHHHHHH TYYDISQKEKFQKRFGNLWIGSQPTPLQGTFQILFLDFSRIGGIDGTLAQNFDDYCCGGL HHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEEEEEEHHHHCCCCCHHHCCCCHHHCCCH DDFASIYEPYYYPGFALEMKQLEGSTNKLNFLDRKARNNGSHLYLIIDEYDNFTNVVLNE HHHHHHHCCCCCCCCEEEHHHHCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECC QGNEIYHALTHASGFYREIFKKFKGMFERIFMTGVSPVTLDDLTSGFNIGWNISTDFQFN CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEECCCEEEE MMLGFSETDVRTMFQYYKDAGQLPADTDIDALIREIKPWYDNYCFAKESLERDPKMFNCD EEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCEECHH MVLYYLRHYITLGKSPEQMIDPNTRTDYNKMKKLIRLDKLDGNRKGVLRKITEEGEVITN HHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHH LVTTFPASEIANPEIFPSLLFYYGMLTITGTRGVRLILGIPNNNVRKQYYDFLLEEYQEK HHHHCCHHHCCCCHHHHHHHHHHHHHEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHH RHIDLNGLRDLFDDMAFDGHWQKSLEFIAHAYKENSSVRSAIEGERNIQGFFTAYLSVNA CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHEEEEEEEEE YYLTAPEVELNHGYCDLFLMPDLLHYEVNHSYIIELKYLSEKDSDAKAEIQWEEAVEQIK EEEECCCEEECCCEEEEEECCCHHHEECCCEEEEEEEEECCCCCCCCEEEEHHHHHHHHH GYAAAPKVRQLIQNTKLHCIVMQFRGWELQRMEEVIQPHIK CCCCCHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHCCCCC >Mature Secondary Structure MIEDVKRIPYGVSNFVEVVEQNQYYVDKTMYLPLLEQQPNSLFFIRPRRFGKSIFLSMLR CCCCCHHCCCCHHHHHHHHHCCCEEECCEEEEEHHHCCCCCEEEECCHHHHHHHHHHHHH TYYDISQKEKFQKRFGNLWIGSQPTPLQGTFQILFLDFSRIGGIDGTLAQNFDDYCCGGL HHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEEEEEEHHHHCCCCCHHHCCCCHHHCCCH DDFASIYEPYYYPGFALEMKQLEGSTNKLNFLDRKARNNGSHLYLIIDEYDNFTNVVLNE HHHHHHHCCCCCCCCEEEHHHHCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECC QGNEIYHALTHASGFYREIFKKFKGMFERIFMTGVSPVTLDDLTSGFNIGWNISTDFQFN CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEECCCEEEE MMLGFSETDVRTMFQYYKDAGQLPADTDIDALIREIKPWYDNYCFAKESLERDPKMFNCD EEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCEECHH MVLYYLRHYITLGKSPEQMIDPNTRTDYNKMKKLIRLDKLDGNRKGVLRKITEEGEVITN HHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHH LVTTFPASEIANPEIFPSLLFYYGMLTITGTRGVRLILGIPNNNVRKQYYDFLLEEYQEK HHHHCCHHHCCCCHHHHHHHHHHHHHEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHH RHIDLNGLRDLFDDMAFDGHWQKSLEFIAHAYKENSSVRSAIEGERNIQGFFTAYLSVNA CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHEEEEEEEEE YYLTAPEVELNHGYCDLFLMPDLLHYEVNHSYIIELKYLSEKDSDAKAEIQWEEAVEQIK EEEECCCEEECCCEEEEEECCCHHHEECCCEEEEEEEEECCCCCCCCEEEEHHHHHHHHH GYAAAPKVRQLIQNTKLHCIVMQFRGWELQRMEEVIQPHIK CCCCCHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2388847 [H]