Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349703

Identifier: 29349703

GI number: 29349703

Start: 5657707

End: 5659551

Strand: Reverse

Name: 29349703

Synonym: BT_4295

Alternate gene names: NA

Gene position: 5659551-5657707 (Counterclockwise)

Preceding gene: 29349704

Following gene: 29349702

Centisome position: 90.4

GC content: 42.33

Gene sequence:

>1845_bases
ATGAGTATGAAAAAAAATATATTAATCATCGGGCTCGCAAGCATATTCGGAATTGCTTCCGGACTTATCTCTTGTTCGCC
CGATTACGAAACCGAGTTTAAAGTAGAAACGCTCGTAGTTCCTGATAAAAGTCAGGCACCTATCACTTTCCCACTTCTGG
GAGGAGAACATGAAATTGAAGTGCAGACCAATGTACCACTCGACAGATGGAGTGCCCAGTCCAATGCAGAATGGTGCAAG
GTAGTACAACACGAGGGCAAAGTAGTCGTATCTGCCAGTGCAAACAATATATACAAACAACGCCGGGCAGAAATCACTGT
AGCCTATGGTCATCAAAGCTATTCCATCACTGTCTCGCAGTTTGGTAAAGAACCGGCCATCCTTATAGGTGACAAGCTAC
AACAGGAAGGATATGTAGAAATAATAGATGCAGAAAGAGAAACATTGACAATTCCTGTAGCGACCAACCTGAATCTGGAT
AATATCATTATACCAGACACTTGCAACTGGATACGTCTGGCAGAGCAACCTGCCACATTTGATGCAAAGACGCGTGCAGC
GGAAGACGTAAACAAACAGGAACTGAAATTTACGCTGGATAAAAGCACCGAGACTGACGTACGTTATTGTACGATTATCC
TCCAGTCTTCCCAGAATTACAGCTATACAGCTTCTTTCCTGATAAAGCAACAACCCAGAGGTTATATAGTCGAAATCGAT
GAAGACAAGAAGATCTATGAAGTGAAAGCAATGGGAGAAACAATCACTATTCCTTTCAAAGTAAATTCTCCTGCCGGTGA
AGTGTCATATACCTATGAAGTCGAAGAATCCGCCCAATCCTGGATCACTCCAGTATCATTACCCGCTTCAAGAGCACTGC
GTGATGTCTCCGAAAGCTTTATCATTAAAGCCAACACTGAAGTTGAGAATCAACCTCGTGAAGGAAAGATAACCTTCAAG
AGTACCAATAGCACCGACAAAGTACCAAGTCAGTTCGTAGTCACAGTAAAACAGGCCGGATTTATCGCGACACCTCCTTT
AAATGTGATCAATGCTACTGCTACTCCGGGAGCCGGAAGTATTCAGCTGCAATGGGAGATACCTGAAGATGTAGACTTCA
ACAAGATAAAGATTACCTATTACGATAAAGTCACGAAAGAAAATAAAGAGATCTTAATAAATGACTATAAGACAACATCC
TATATCATAGATGATACTTACCAATGTGCAGGTGAATACTCATTTACTATCAACACCTATGGTCCGACTGGTATGGAGAC
AGATAGTCCGGTAACAATAACAGGCATTTCCGGCGAAGCTTCCGAAATGGAACGTGTTACTCTTACTATCGATATGCTTT
CCGACAATGCTAATCATGTCGGAGACGGAGGCGGTTTACCGGCATTGATTGACGGGAAGGTGAATACTTATTATCATACC
AAGTGGAATGCTCCTGTTACAACAGAAGCACATTATGTCCAGATCAAACTGAACAAACCATTAAAGGACCTTTGTTTTGA
ATATGATGCACGTCAAAGCGGAGTGAATAACGGAGGTGACGTAAAAGCCGCAACAATATATGGAAGTATGAACGGTGAGT
TCTTTGAAAGTATGGGTAATGAAGAATTCAATCTGCCGACAACAAACGGTGGCCATGCCACAGCTAAAAACAATGTGAGT
GGAAAGCAAGCTTACAACTATATCCGATTTACTCCTACGGCTCGCCGTGACAAAGATCCATTGGATTATACTGTCGCAGG
CAGTGCATGGTGGAATATGTCCGAAATATACCTTTACAGAATAAGACATGATGAAGCCTGGGCAAGAGAACAGCTAGGCA
TTTAA

Upstream 100 bases:

>100_bases
TTATAAATATCGCCTGGAATCCACCGCCCCTTACCGGGAAGTGAAAGCCAAACTACGATATGAATTTAACCCAAGAGTAG
ATAACTTGTAATCAAATCAA

Downstream 100 bases:

>100_bases
GTAAAACAAGAAAAGACTGACGAAGAACAAAATAAGATCAGATTAGACACATTTTCTTATCGAGTTCTTCGCCAGTCTTA
CTTTTTTATAAAATTGGATG

Product: putative chitobiase

Products: NA

Alternate protein names: Lipoprotein

Number of amino acids: Translated: 614; Mature: 613

Protein sequence:

>614_residues
MSMKKNILIIGLASIFGIASGLISCSPDYETEFKVETLVVPDKSQAPITFPLLGGEHEIEVQTNVPLDRWSAQSNAEWCK
VVQHEGKVVVSASANNIYKQRRAEITVAYGHQSYSITVSQFGKEPAILIGDKLQQEGYVEIIDAERETLTIPVATNLNLD
NIIIPDTCNWIRLAEQPATFDAKTRAAEDVNKQELKFTLDKSTETDVRYCTIILQSSQNYSYTASFLIKQQPRGYIVEID
EDKKIYEVKAMGETITIPFKVNSPAGEVSYTYEVEESAQSWITPVSLPASRALRDVSESFIIKANTEVENQPREGKITFK
STNSTDKVPSQFVVTVKQAGFIATPPLNVINATATPGAGSIQLQWEIPEDVDFNKIKITYYDKVTKENKEILINDYKTTS
YIIDDTYQCAGEYSFTINTYGPTGMETDSPVTITGISGEASEMERVTLTIDMLSDNANHVGDGGGLPALIDGKVNTYYHT
KWNAPVTTEAHYVQIKLNKPLKDLCFEYDARQSGVNNGGDVKAATIYGSMNGEFFESMGNEEFNLPTTNGGHATAKNNVS
GKQAYNYIRFTPTARRDKDPLDYTVAGSAWWNMSEIYLYRIRHDEAWAREQLGI

Sequences:

>Translated_614_residues
MSMKKNILIIGLASIFGIASGLISCSPDYETEFKVETLVVPDKSQAPITFPLLGGEHEIEVQTNVPLDRWSAQSNAEWCK
VVQHEGKVVVSASANNIYKQRRAEITVAYGHQSYSITVSQFGKEPAILIGDKLQQEGYVEIIDAERETLTIPVATNLNLD
NIIIPDTCNWIRLAEQPATFDAKTRAAEDVNKQELKFTLDKSTETDVRYCTIILQSSQNYSYTASFLIKQQPRGYIVEID
EDKKIYEVKAMGETITIPFKVNSPAGEVSYTYEVEESAQSWITPVSLPASRALRDVSESFIIKANTEVENQPREGKITFK
STNSTDKVPSQFVVTVKQAGFIATPPLNVINATATPGAGSIQLQWEIPEDVDFNKIKITYYDKVTKENKEILINDYKTTS
YIIDDTYQCAGEYSFTINTYGPTGMETDSPVTITGISGEASEMERVTLTIDMLSDNANHVGDGGGLPALIDGKVNTYYHT
KWNAPVTTEAHYVQIKLNKPLKDLCFEYDARQSGVNNGGDVKAATIYGSMNGEFFESMGNEEFNLPTTNGGHATAKNNVS
GKQAYNYIRFTPTARRDKDPLDYTVAGSAWWNMSEIYLYRIRHDEAWAREQLGI
>Mature_613_residues
SMKKNILIIGLASIFGIASGLISCSPDYETEFKVETLVVPDKSQAPITFPLLGGEHEIEVQTNVPLDRWSAQSNAEWCKV
VQHEGKVVVSASANNIYKQRRAEITVAYGHQSYSITVSQFGKEPAILIGDKLQQEGYVEIIDAERETLTIPVATNLNLDN
IIIPDTCNWIRLAEQPATFDAKTRAAEDVNKQELKFTLDKSTETDVRYCTIILQSSQNYSYTASFLIKQQPRGYIVEIDE
DKKIYEVKAMGETITIPFKVNSPAGEVSYTYEVEESAQSWITPVSLPASRALRDVSESFIIKANTEVENQPREGKITFKS
TNSTDKVPSQFVVTVKQAGFIATPPLNVINATATPGAGSIQLQWEIPEDVDFNKIKITYYDKVTKENKEILINDYKTTSY
IIDDTYQCAGEYSFTINTYGPTGMETDSPVTITGISGEASEMERVTLTIDMLSDNANHVGDGGGLPALIDGKVNTYYHTK
WNAPVTTEAHYVQIKLNKPLKDLCFEYDARQSGVNNGGDVKAATIYGSMNGEFFESMGNEEFNLPTTNGGHATAKNNVSG
KQAYNYIRFTPTARRDKDPLDYTVAGSAWWNMSEIYLYRIRHDEAWAREQLGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68361; Mature: 68230

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50853 FN3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMKKNILIIGLASIFGIASGLISCSPDYETEFKVETLVVPDKSQAPITFPLLGGEHEIE
CCCCCCEEEEEHHHHHHHHHHHEECCCCCCCCEEEEEEEECCCCCCCEEEEEECCCEEEE
VQTNVPLDRWSAQSNAEWCKVVQHEGKVVVSASANNIYKQRRAEITVAYGHQSYSITVSQ
EEECCCHHHCCCCCCCHHHHHHCCCCCEEEEECCCHHHHHCCCEEEEEECCCEEEEEHHH
FGKEPAILIGDKLQQEGYVEIIDAERETLTIPVATNLNLDNIIIPDTCNWIRLAEQPATF
CCCCCEEEECCCCCCCCCEEEEECCCCEEEEEEEECCCCCCEECCCCCCEEEEECCCCCC
DAKTRAAEDVNKQELKFTLDKSTETDVRYCTIILQSSQNYSYTASFLIKQQPRGYIVEID
CCHHHHHHCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCEEEEEEEEEECCCCEEEEEC
EDKKIYEVKAMGETITIPFKVNSPAGEVSYTYEVEESAQSWITPVSLPASRALRDVSESF
CCCEEEEEEECCCEEEEEEEECCCCCCEEEEEEEHHHHHHCCCCCCCCHHHHHHHCCCCE
IIKANTEVENQPREGKITFKSTNSTDKVPSQFVVTVKQAGFIATPPLNVINATATPGAGS
EEEECCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCEEECCCCCEEEECCCCCCCE
IQLQWEIPEDVDFNKIKITYYDKVTKENKEILINDYKTTSYIIDDTYQCAGEYSFTINTY
EEEEEECCCCCCCCEEEEEEEECCCCCCCEEEEECCCEEEEEECCCCCCCCEEEEEEECC
GPTGMETDSPVTITGISGEASEMERVTLTIDMLSDNANHVGDGGGLPALIDGKVNTYYHT
CCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEECCEEEEEEE
KWNAPVTTEAHYVQIKLNKPLKDLCFEYDARQSGVNNGGDVKAATIYGSMNGEFFESMGN
EECCCEECCEEEEEEEECCCHHHHHHHCCHHHCCCCCCCCEEEEEEEECCCCHHHHHCCC
EEFNLPTTNGGHATAKNNVSGKQAYNYIRFTPTARRDKDPLDYTVAGSAWWNMSEIYLYR
CCCCCCCCCCCCCEECCCCCCHHHCEEEEECCCCCCCCCCCCEEEECCCCCCCEEEEEEE
IRHDEAWAREQLGI
EECCCHHHHHHCCC
>Mature Secondary Structure 
SMKKNILIIGLASIFGIASGLISCSPDYETEFKVETLVVPDKSQAPITFPLLGGEHEIE
CCCCCEEEEEHHHHHHHHHHHEECCCCCCCCEEEEEEEECCCCCCCEEEEEECCCEEEE
VQTNVPLDRWSAQSNAEWCKVVQHEGKVVVSASANNIYKQRRAEITVAYGHQSYSITVSQ
EEECCCHHHCCCCCCCHHHHHHCCCCCEEEEECCCHHHHHCCCEEEEEECCCEEEEEHHH
FGKEPAILIGDKLQQEGYVEIIDAERETLTIPVATNLNLDNIIIPDTCNWIRLAEQPATF
CCCCCEEEECCCCCCCCCEEEEECCCCEEEEEEEECCCCCCEECCCCCCEEEEECCCCCC
DAKTRAAEDVNKQELKFTLDKSTETDVRYCTIILQSSQNYSYTASFLIKQQPRGYIVEID
CCHHHHHHCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCEEEEEEEEEECCCCEEEEEC
EDKKIYEVKAMGETITIPFKVNSPAGEVSYTYEVEESAQSWITPVSLPASRALRDVSESF
CCCEEEEEEECCCEEEEEEEECCCCCCEEEEEEEHHHHHHCCCCCCCCHHHHHHHCCCCE
IIKANTEVENQPREGKITFKSTNSTDKVPSQFVVTVKQAGFIATPPLNVINATATPGAGS
EEEECCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCEEECCCCCEEEECCCCCCCE
IQLQWEIPEDVDFNKIKITYYDKVTKENKEILINDYKTTSYIIDDTYQCAGEYSFTINTY
EEEEEECCCCCCCCEEEEEEEECCCCCCCEEEEECCCEEEEEECCCCCCCCEEEEEEECC
GPTGMETDSPVTITGISGEASEMERVTLTIDMLSDNANHVGDGGGLPALIDGKVNTYYHT
CCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEECCEEEEEEE
KWNAPVTTEAHYVQIKLNKPLKDLCFEYDARQSGVNNGGDVKAATIYGSMNGEFFESMGN
EECCCEECCEEEEEEEECCCHHHHHHHCCHHHCCCCCCCCEEEEEEEECCCCHHHHHCCC
EEFNLPTTNGGHATAKNNVSGKQAYNYIRFTPTARRDKDPLDYTVAGSAWWNMSEIYLYR
CCCCCCCCCCCCCEECCCCCCHHHCEEEEECCCCCCCCCCCCEEEECCCCCCCEEEEEEE
IRHDEAWAREQLGI
EECCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA