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The map label for this gene is trkA [H]

Identifier: 29349506

GI number: 29349506

Start: 5354691

End: 5356031

Strand: Reverse

Name: trkA [H]

Synonym: BT_4098

Alternate gene names: 29349506

Gene position: 5356031-5354691 (Counterclockwise)

Preceding gene: 29349507

Following gene: 29349505

Centisome position: 85.55

GC content: 47.95

Gene sequence:

>1341_bases
ATGAAGATAATTATCGCAGGTGCCGGAAACGTAGGCACCCACCTGGCTAAATTATTGTCCCGGGAAAAACAGGACATTAT
CCTGATGGACGATGACGAAGAAAAACTAAGTGCCCTCAGCGCCAACTTCGATTTGTTGACTGTCACGGCTTCTCCTTCTT
CCATCTCGGGACTGAAAGAGGTAGGCGTGAAAGAAGCGGACTTGTTCATCGCAGTCACCCCCGACGAAAGCAGGAATATG
ACTGCCTGTATGCTAGCCACCAATCTGGGTGCCAAAAAGACTGTCGCCCGCATCGACAACTACGAATATCTTCTGCCCAA
AAACAAGGAATTCTTCCGGAAACTGGGTGTAGACTCATTGATCTATCCGGAAATGCTTGCTGCCAAAGAAATCGTATCTT
CCATGCGTATGAGCTGGGTACGTCAATGGTGGGAATTCTGCGGAGGCGCCTTGATACTGATCGGTACCAAGATGCGCGAA
AAAGCGGAAATACTGAATATTCCCCTCCATCAACTGGGTGCACCGGACATCCCTTACCACGTGGTAGCCATCAAACGCGG
AACGGAAACCATCATTCCGCGCGGAGACGATGTTATCAAACTGCACGATATTGTTTATTTCACCACTACACGCAAATATA
TTCCTTATATCCGGAAAATAGCCGGCAAGGAGGATTATGCCGATGTACGCAACGTCATGATCATGGGCGGAAGCCGTATC
GCCGTCCGTACCGCTCAGTACGTGCCGGATTATATGCAGGTAAAAATTGTAGATAACGACATCAACCGTTGCAACCGGCT
GACTGAATTATTGGACGACAAAACCATGATCATCAACGGCGATGGTCGTGATATGGACCTGCTCATCGAAGAAGGTTTAA
AGAATACCGAAGCATTTGTCGCCTTGACGGACAATTCGGAAACGAACATCCTCGCCTGTCTCGCCGCCAAACGTATGGGA
GTGGAAAAGACGGTGGCGGAAGTAGAGAATATCGACTATATCGGCATGGCGGAAAGTCTTGATATCGGCACGGTCATCAA
TAAGAAAATGATTGCCGCCAGCCACATTTATCAGATGATGCTGGATGCCGATGTATCCAATGTCAAATGCCTGACGTTTG
CCAACGCCGATGTGGCTGAGTTTACCGTACCCGCCGGAGCAAAGATTACTAAAAATTTAATCAAGGATCTGGGATTGCCC
AAAGGAACAACCATCGGAGGTATGATTCGCAATGGCGAAGGAGTGCTCGTAACCGGAGATACGCTGATTCGTCCTGGAGA
CCATGTCGTTGTATTCTGCCTGAGTATGATGATCAAGAAGATTGAGAAGTTCTTTAATTAA

Upstream 100 bases:

>100_bases
AGCTCTGCGGAATGGATGAAGACAGCCTGACAAAAGAATTGCTGAAGCAATGTGAACTTCTGCCCGACATGAGCAAAATA
AAAGAATTAACTAACTGAAG

Downstream 100 bases:

>100_bases
GTAATAGGTATTAAGTAATAAGTATTAGGTAATAGGTAATAACCGTAGCTGCTTGTACTTGACATTATATCTGATACTTG
GCGCATAATACTTAATACTT

Product: potassium transporter peripheral membrane component

Products: NA

Alternate protein names: K(+)-uptake protein trkA [H]

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MKIIIAGAGNVGTHLAKLLSREKQDIILMDDDEEKLSALSANFDLLTVTASPSSISGLKEVGVKEADLFIAVTPDESRNM
TACMLATNLGAKKTVARIDNYEYLLPKNKEFFRKLGVDSLIYPEMLAAKEIVSSMRMSWVRQWWEFCGGALILIGTKMRE
KAEILNIPLHQLGAPDIPYHVVAIKRGTETIIPRGDDVIKLHDIVYFTTTRKYIPYIRKIAGKEDYADVRNVMIMGGSRI
AVRTAQYVPDYMQVKIVDNDINRCNRLTELLDDKTMIINGDGRDMDLLIEEGLKNTEAFVALTDNSETNILACLAAKRMG
VEKTVAEVENIDYIGMAESLDIGTVINKKMIAASHIYQMMLDADVSNVKCLTFANADVAEFTVPAGAKITKNLIKDLGLP
KGTTIGGMIRNGEGVLVTGDTLIRPGDHVVVFCLSMMIKKIEKFFN

Sequences:

>Translated_446_residues
MKIIIAGAGNVGTHLAKLLSREKQDIILMDDDEEKLSALSANFDLLTVTASPSSISGLKEVGVKEADLFIAVTPDESRNM
TACMLATNLGAKKTVARIDNYEYLLPKNKEFFRKLGVDSLIYPEMLAAKEIVSSMRMSWVRQWWEFCGGALILIGTKMRE
KAEILNIPLHQLGAPDIPYHVVAIKRGTETIIPRGDDVIKLHDIVYFTTTRKYIPYIRKIAGKEDYADVRNVMIMGGSRI
AVRTAQYVPDYMQVKIVDNDINRCNRLTELLDDKTMIINGDGRDMDLLIEEGLKNTEAFVALTDNSETNILACLAAKRMG
VEKTVAEVENIDYIGMAESLDIGTVINKKMIAASHIYQMMLDADVSNVKCLTFANADVAEFTVPAGAKITKNLIKDLGLP
KGTTIGGMIRNGEGVLVTGDTLIRPGDHVVVFCLSMMIKKIEKFFN
>Mature_446_residues
MKIIIAGAGNVGTHLAKLLSREKQDIILMDDDEEKLSALSANFDLLTVTASPSSISGLKEVGVKEADLFIAVTPDESRNM
TACMLATNLGAKKTVARIDNYEYLLPKNKEFFRKLGVDSLIYPEMLAAKEIVSSMRMSWVRQWWEFCGGALILIGTKMRE
KAEILNIPLHQLGAPDIPYHVVAIKRGTETIIPRGDDVIKLHDIVYFTTTRKYIPYIRKIAGKEDYADVRNVMIMGGSRI
AVRTAQYVPDYMQVKIVDNDINRCNRLTELLDDKTMIINGDGRDMDLLIEEGLKNTEAFVALTDNSETNILACLAAKRMG
VEKTVAEVENIDYIGMAESLDIGTVINKKMIAASHIYQMMLDADVSNVKCLTFANADVAEFTVPAGAKITKNLIKDLGLP
KGTTIGGMIRNGEGVLVTGDTLIRPGDHVVVFCLSMMIKKIEKFFN

Specific function: Part of a potassium transport system [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Peripherally Bound To The Inner Side Of The Inner Membrane Via The Trkg And Trkh Proteins [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK N-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1789685, Length=455, Percent_Identity=29.2307692307692, Blast_Score=181, Evalue=1e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006036
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 49377; Mature: 49377

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIIAGAGNVGTHLAKLLSREKQDIILMDDDEEKLSALSANFDLLTVTASPSSISGLKE
CEEEEEECCCHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCCCEEEEEEECCCHHHHHHH
VGVKEADLFIAVTPDESRNMTACMLATNLGAKKTVARIDNYEYLLPKNKEFFRKLGVDSL
CCCCCCCEEEEECCCCCCCCEEEEEEECCCCHHHHHHHCCCEEECCCCHHHHHHCCCCHH
IYPEMLAAKEIVSSMRMSWVRQWWEFCGGALILIGTKMREKAEILNIPLHQLGAPDIPYH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHCCCHHHCCCCCCCEE
VVAIKRGTETIIPRGDDVIKLHDIVYFTTTRKYIPYIRKIAGKEDYADVRNVMIMGGSRI
EEEEECCCCEECCCCCCEEEEEEEEEEEECHHHHHHHHHHCCCCHHHHHCEEEEECCCEE
AVRTAQYVPDYMQVKIVDNDINRCNRLTELLDDKTMIINGDGRDMDLLIEEGLKNTEAFV
EEEEHHHCCCEEEEEEECCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCCCCEEEE
ALTDNSETNILACLAAKRMGVEKTVAEVENIDYIGMAESLDIGTVINKKMIAASHIYQMM
EEECCCCCCEEEEEHHHHCCHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHH
LDADVSNVKCLTFANADVAEFTVPAGAKITKNLIKDLGLPKGTTIGGMIRNGEGVLVTGD
HCCCCCCEEEEEECCCCHHEEECCCCCHHHHHHHHHCCCCCCCEECCEEECCCEEEEECC
TLIRPGDHVVVFCLSMMIKKIEKFFN
EEECCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIIIAGAGNVGTHLAKLLSREKQDIILMDDDEEKLSALSANFDLLTVTASPSSISGLKE
CEEEEEECCCHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCCCEEEEEEECCCHHHHHHH
VGVKEADLFIAVTPDESRNMTACMLATNLGAKKTVARIDNYEYLLPKNKEFFRKLGVDSL
CCCCCCCEEEEECCCCCCCCEEEEEEECCCCHHHHHHHCCCEEECCCCHHHHHHCCCCHH
IYPEMLAAKEIVSSMRMSWVRQWWEFCGGALILIGTKMREKAEILNIPLHQLGAPDIPYH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHCCCHHHCCCCCCCEE
VVAIKRGTETIIPRGDDVIKLHDIVYFTTTRKYIPYIRKIAGKEDYADVRNVMIMGGSRI
EEEEECCCCEECCCCCCEEEEEEEEEEEECHHHHHHHHHHCCCCHHHHHCEEEEECCCEE
AVRTAQYVPDYMQVKIVDNDINRCNRLTELLDDKTMIINGDGRDMDLLIEEGLKNTEAFV
EEEEHHHCCCEEEEEEECCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCCCCEEEE
ALTDNSETNILACLAAKRMGVEKTVAEVENIDYIGMAESLDIGTVINKKMIAASHIYQMM
EEECCCCCCEEEEEHHHHCCHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHH
LDADVSNVKCLTFANADVAEFTVPAGAKITKNLIKDLGLPKGTTIGGMIRNGEGVLVTGD
HCCCCCCEEEEEECCCCHHEEECCCCCHHHHHHHHHCCCCCCCEECCEEECCCEEEEECC
TLIRPGDHVVVFCLSMMIKKIEKFFN
EEECCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]