| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is trkG [H]
Identifier: 29349505
GI number: 29349505
Start: 5353085
End: 5354536
Strand: Reverse
Name: trkG [H]
Synonym: BT_4097
Alternate gene names: 29349505
Gene position: 5354536-5353085 (Counterclockwise)
Preceding gene: 29349506
Following gene: 29349476
Centisome position: 85.53
GC content: 45.45
Gene sequence:
>1452_bases ATGATTAATTCGAGGATGATATATCGCATCATGGGGTTTCTGTTACTGATAGAAACGGCTATGTTAATGTGTTGCGGTGG TGTTTCACTATTTTACAAGGAAGATGATTTAAACAGTTTTCTGCTTTCATCAGCTATCACGGCCTTTGTAGGTGTGATTA TGCTTGCTATTGGAAGAGGGGCCGAAAAGTCACTCAACCGCCGCGATGGATATGTGATTGTCAGTGTAGCCTGGATTGCT TTCTCCTTTTTTGGAATGTTGCCCTATTATATAGGCGGGTATATTCCAAGTGTCACCGATGCCTTCTTCGAGACAATGTC CGGCTTCAGCAGTACCGGTGCCACCATCATGAATAATATAGAATCGATGCCTCACGGAATCCTTTTCTGGCGGGCAATGA CTCAGTGGATCGGCGGTCTGGGAATTGTATTCTTTACGATTGCCGTTCTTCCGATTTTCGGTATGGGAGGTATTCAGGTA TTTGCCGCCGAAGCCAGTGGGCCGACTCATGACAAAGTACATCCCCGTATTGGTGTTACCGCCAAATGGATCTGGGGCAT CTATGCCGGTATGACGGGGACATTGATTATATTACTGGTATTCGGGGGCATGGGACTTTTCGACAGTATCTGCCACGCTT TCACCACGACCAGTACAGGTGGGTTCTCCACCAAGCAGACAAGTATCGAATATTACCACTCGCCTTACATAGACTATGTA ATATCTGTTTTCATGTTCCTCTCGGGAGTCAACTTCACGCTATTATTGCTGATGTTCAATGGGAAAATAAAGAAGTTTAT CCATGATGCCGAGCTGAAGTTTTATTTTATGTCTGTTGCCTTTTTCACGGTTTTCATAGCAGTCTGGCTTTATCAGACCA GTTCGATGGGAGCAGAAGAAGCATTCCGGAAATCTCTGTTCCAAGTAATCTCCCTACAGACTTCAACCGGTTTTGCCACT GCCGACTATATGCTCTGGCCCTCCATTCTCTGGGGCTGTCTTCTTATCGTAATGATAATGGGTGCTTGCGCAGGCAGTAC GACAGGTGGTATCAAATGTATCCGCATGGTTATCCTCTTCAAAGTTGCCAAAAATGAATTTAAACATATTCTGCATCCCA ATGCAGTATTGCCCGTACGGGTGAATAAACAGGTGATCTCCCCCTCTATCCAGTCTACCGTACTGGCATTTACATTTTTG TATGCAATCATCGCCATTATCAGCATTCTTGTCATGATGGGCTTCGGAGTGGGATTTCTCGAATCTATCGGAACGGTCAT ATCAAGTATAGGAAACATGGGACCGGGACTCGGCACGTGTGGCCCTGCCTTCTCGTGGAGTGAATTGCCTGATGCAGCCA AATGGTTGCTCTCCTTTTTGATGCTTCTCGGACGTCTGGAGTTGTTTACGGTATTGCTGCTGTTCAGTTCCGATTTCTGG AAAAGAAATTAA
Upstream 100 bases:
>100_bases GTACTTGACATTATATCTGATACTTGGCGCATAATACTTAATACTTAATACCTATTACTTATTACTTAATACCTATTACT TAATACCTATTACTTAAAAA
Downstream 100 bases:
>100_bases ATCAAATATCATACATAAAAAAGGTGCCGACTATTAGCCGGCACCACCATACACCAATTCAAACCTTTCTTATCTAAAGA AATATTATATTTTTCTCAGA
Product: Trk system K+ uptake protein trkH
Products: Proton [Cytoplasm]; K (I) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 483; Mature: 483
Protein sequence:
>483_residues MINSRMIYRIMGFLLLIETAMLMCCGGVSLFYKEDDLNSFLLSSAITAFVGVIMLAIGRGAEKSLNRRDGYVIVSVAWIA FSFFGMLPYYIGGYIPSVTDAFFETMSGFSSTGATIMNNIESMPHGILFWRAMTQWIGGLGIVFFTIAVLPIFGMGGIQV FAAEASGPTHDKVHPRIGVTAKWIWGIYAGMTGTLIILLVFGGMGLFDSICHAFTTTSTGGFSTKQTSIEYYHSPYIDYV ISVFMFLSGVNFTLLLLMFNGKIKKFIHDAELKFYFMSVAFFTVFIAVWLYQTSSMGAEEAFRKSLFQVISLQTSTGFAT ADYMLWPSILWGCLLIVMIMGACAGSTTGGIKCIRMVILFKVAKNEFKHILHPNAVLPVRVNKQVISPSIQSTVLAFTFL YAIIAIISILVMMGFGVGFLESIGTVISSIGNMGPGLGTCGPAFSWSELPDAAKWLLSFLMLLGRLELFTVLLLFSSDFW KRN
Sequences:
>Translated_483_residues MINSRMIYRIMGFLLLIETAMLMCCGGVSLFYKEDDLNSFLLSSAITAFVGVIMLAIGRGAEKSLNRRDGYVIVSVAWIA FSFFGMLPYYIGGYIPSVTDAFFETMSGFSSTGATIMNNIESMPHGILFWRAMTQWIGGLGIVFFTIAVLPIFGMGGIQV FAAEASGPTHDKVHPRIGVTAKWIWGIYAGMTGTLIILLVFGGMGLFDSICHAFTTTSTGGFSTKQTSIEYYHSPYIDYV ISVFMFLSGVNFTLLLLMFNGKIKKFIHDAELKFYFMSVAFFTVFIAVWLYQTSSMGAEEAFRKSLFQVISLQTSTGFAT ADYMLWPSILWGCLLIVMIMGACAGSTTGGIKCIRMVILFKVAKNEFKHILHPNAVLPVRVNKQVISPSIQSTVLAFTFL YAIIAIISILVMMGFGVGFLESIGTVISSIGNMGPGLGTCGPAFSWSELPDAAKWLLSFLMLLGRLELFTVLLLFSSDFW KRN >Mature_483_residues MINSRMIYRIMGFLLLIETAMLMCCGGVSLFYKEDDLNSFLLSSAITAFVGVIMLAIGRGAEKSLNRRDGYVIVSVAWIA FSFFGMLPYYIGGYIPSVTDAFFETMSGFSSTGATIMNNIESMPHGILFWRAMTQWIGGLGIVFFTIAVLPIFGMGGIQV FAAEASGPTHDKVHPRIGVTAKWIWGIYAGMTGTLIILLVFGGMGLFDSICHAFTTTSTGGFSTKQTSIEYYHSPYIDYV ISVFMFLSGVNFTLLLLMFNGKIKKFIHDAELKFYFMSVAFFTVFIAVWLYQTSSMGAEEAFRKSLFQVISLQTSTGFAT ADYMLWPSILWGCLLIVMIMGACAGSTTGGIKCIRMVILFKVAKNEFKHILHPNAVLPVRVNKQVISPSIQSTVLAFTFL YAIIAIISILVMMGFGVGFLESIGTVISSIGNMGPGLGTCGPAFSWSELPDAAKWLLSFLMLLGRLELFTVLLLFSSDFW KRN
Specific function: Low-affinity potassium transport system. Interacts with trk system potassium uptake protein trkA. TrkE increases the affinity of the system [H]
COG id: COG0168
COG function: function code P; Trk-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trkH potassium transport family [H]
Homologues:
Organism=Escherichia coli, GI1787626, Length=480, Percent_Identity=35.625, Blast_Score=293, Evalue=1e-80, Organism=Escherichia coli, GI48994987, Length=485, Percent_Identity=37.5257731958763, Blast_Score=290, Evalue=2e-79,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003445 - InterPro: IPR004772 [H]
Pfam domain/function: PF02386 TrkH [H]
EC number: NA
Molecular weight: Translated: 53189; Mature: 53189
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINSRMIYRIMGFLLLIETAMLMCCGGVSLFYKEDDLNSFLLSSAITAFVGVIMLAIGRG CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC AEKSLNRRDGYVIVSVAWIAFSFFGMLPYYIGGYIPSVTDAFFETMSGFSSTGATIMNNI CHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHH ESMPHGILFWRAMTQWIGGLGIVFFTIAVLPIFGMGGIQVFAAEASGPTHDKVHPRIGVT HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCH AKWIWGIYAGMTGTLIILLVFGGMGLFDSICHAFTTTSTGGFSTKQTSIEYYHSPYIDYV HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCHHHHH ISVFMFLSGVNFTLLLLMFNGKIKKFIHDAELKFYFMSVAFFTVFIAVWLYQTSSMGAEE HHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH AFRKSLFQVISLQTSTGFATADYMLWPSILWGCLLIVMIMGACAGSTTGGIKCIRMVILF HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH KVAKNEFKHILHPNAVLPVRVNKQVISPSIQSTVLAFTFLYAIIAIISILVMMGFGVGFL HHHHHHHHHHHCCCCEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH ESIGTVISSIGNMGPGLGTCGPAFSWSELPDAAKWLLSFLMLLGRLELFTVLLLFSSDFW HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRN CCC >Mature Secondary Structure MINSRMIYRIMGFLLLIETAMLMCCGGVSLFYKEDDLNSFLLSSAITAFVGVIMLAIGRG CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC AEKSLNRRDGYVIVSVAWIAFSFFGMLPYYIGGYIPSVTDAFFETMSGFSSTGATIMNNI CHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHH ESMPHGILFWRAMTQWIGGLGIVFFTIAVLPIFGMGGIQVFAAEASGPTHDKVHPRIGVT HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCH AKWIWGIYAGMTGTLIILLVFGGMGLFDSICHAFTTTSTGGFSTKQTSIEYYHSPYIDYV HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCHHHHH ISVFMFLSGVNFTLLLLMFNGKIKKFIHDAELKFYFMSVAFFTVFIAVWLYQTSSMGAEE HHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH AFRKSLFQVISLQTSTGFATADYMLWPSILWGCLLIVMIMGACAGSTTGGIKCIRMVILF HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH KVAKNEFKHILHPNAVLPVRVNKQVISPSIQSTVLAFTFLYAIIAIISILVMMGFGVGFL HHHHHHHHHHHCCCCEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH ESIGTVISSIGNMGPGLGTCGPAFSWSELPDAAKWLLSFLMLLGRLELFTVLLLFSSDFW HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRN CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Periplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Periplasm] = Proton [Cytoplasm] + K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2022616; 9097039; 9278503 [H]