Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
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Accession | NC_004663 |
Length | 6,260,361 |
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The map label for this gene is yvyE [H]
Identifier: 29346560
GI number: 29346560
Start: 1434742
End: 1435350
Strand: Reverse
Name: yvyE [H]
Synonym: BT_1150
Alternate gene names: 29346560
Gene position: 1435350-1434742 (Counterclockwise)
Preceding gene: 29346561
Following gene: 29346559
Centisome position: 22.93
GC content: 42.86
Gene sequence:
>609_bases ATGACTGCTGAAGATACTTATAAAACTATCGTCGAACCTTCCGAAGGTATTTATACAGAAAAGCGAAGCAAGTTTATTGC CATCGCCTTGCCTGTGCGTACCCTTGATGAGATAAAAGCGCATCTTGAAACGTATCAGAAGAAGTATTATGATGCACGGC ACGTGTGCTATGCTTATATGTTAGGTGCAGCGCGAAAGGATTTTCGAGCCAATGATAACGGTGAACCTTCGGGAACGGCG GGAAAGCCCATTCTCGGGCAAATTAACTCTAATGAACTGACTGATATTCTGATTATTGTAGTCCGTTATTTCGGTGGAAT CAAGTTAGGAACGAGCGGACTGATTGTAGCTTATAAAGCAGCTGCTGCCGAAGCAATATCTGCCGCTACCATTATAGAAA AAACGGTAGATGAAGAAGTGACCGTAATGTTTGAATATCCTTTTATGAACGATATCATGCGTATTGTAAAGGAGGAAGAA CCGGAAATTCTCAGTCAATCGTACGATATGGATTGCAGCATGACGTTGTGTATTCGTCGTTCCATGATGCCCAAACTGCG TGCACGATTGGAGAAAGTGGAGACCGCAAGGATTCTTGATGAAGAGTAA
Upstream 100 bases:
>100_bases ACCGTTTGACTGCATGAAATGAAGCGCTCGTTTCAATGAGAAGCTTTAATATTTTCGAACAGCAGATGGAATTTCGTCAA GAAAGCCGTATCTTTGCGGC
Downstream 100 bases:
>100_bases AATAAAGAAAAATAAGAATATATGGCATTTGAAGCAACAAAAAGAGAATGGTGTGAACTGTATACTTTCTTCCGTCTGCT GACAGAAGGAAAAGTAACGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MTAEDTYKTIVEPSEGIYTEKRSKFIAIALPVRTLDEIKAHLETYQKKYYDARHVCYAYMLGAARKDFRANDNGEPSGTA GKPILGQINSNELTDILIIVVRYFGGIKLGTSGLIVAYKAAAAEAISAATIIEKTVDEEVTVMFEYPFMNDIMRIVKEEE PEILSQSYDMDCSMTLCIRRSMMPKLRARLEKVETARILDEE
Sequences:
>Translated_202_residues MTAEDTYKTIVEPSEGIYTEKRSKFIAIALPVRTLDEIKAHLETYQKKYYDARHVCYAYMLGAARKDFRANDNGEPSGTA GKPILGQINSNELTDILIIVVRYFGGIKLGTSGLIVAYKAAAAEAISAATIIEKTVDEEVTVMFEYPFMNDIMRIVKEEE PEILSQSYDMDCSMTLCIRRSMMPKLRARLEKVETARILDEE >Mature_201_residues TAEDTYKTIVEPSEGIYTEKRSKFIAIALPVRTLDEIKAHLETYQKKYYDARHVCYAYMLGAARKDFRANDNGEPSGTAG KPILGQINSNELTDILIIVVRYFGGIKLGTSGLIVAYKAAAAEAISAATIIEKTVDEEVTVMFEYPFMNDIMRIVKEEEP EILSQSYDMDCSMTLCIRRSMMPKLRARLEKVETARILDEE
Specific function: Unknown
COG id: COG1739
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IMPACT family [H]
Homologues:
Organism=Escherichia coli, GI87082338, Length=172, Percent_Identity=31.9767441860465, Blast_Score=80, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR020568 - InterPro: IPR000640 - InterPro: IPR015796 - InterPro: IPR015269 - InterPro: IPR020569 - InterPro: IPR001498 [H]
Pfam domain/function: PF09186 DUF1949; PF01205 UPF0029 [H]
EC number: NA
Molecular weight: Translated: 22811; Mature: 22679
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS00910 UPF0029
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAEDTYKTIVEPSEGIYTEKRSKFIAIALPVRTLDEIKAHLETYQKKYYDARHVCYAYM CCCCHHHHHHCCCCCCCCHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGAARKDFRANDNGEPSGTAGKPILGQINSNELTDILIIVVRYFGGIKLGTSGLIVAYKA HHHHHHHCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCEEECCCCEEEEEHH AAAEAISAATIIEKTVDEEVTVMFEYPFMNDIMRIVKEEEPEILSQSYDMDCSMTLCIRR HHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHH SMMPKLRARLEKVETARILDEE HHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TAEDTYKTIVEPSEGIYTEKRSKFIAIALPVRTLDEIKAHLETYQKKYYDARHVCYAYM CCCHHHHHHCCCCCCCCHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGAARKDFRANDNGEPSGTAGKPILGQINSNELTDILIIVVRYFGGIKLGTSGLIVAYKA HHHHHHHCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCEEECCCCEEEEEHH AAAEAISAATIIEKTVDEEVTVMFEYPFMNDIMRIVKEEEPEILSQSYDMDCSMTLCIRR HHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHH SMMPKLRARLEKVETARILDEE HHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 3141378; 8313894 [H]