Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29346561

Identifier: 29346561

GI number: 29346561

Start: 1435606

End: 1436853

Strand: Reverse

Name: 29346561

Synonym: BT_1151

Alternate gene names: NA

Gene position: 1436853-1435606 (Counterclockwise)

Preceding gene: 29346562

Following gene: 29346560

Centisome position: 22.95

GC content: 43.83

Gene sequence:

>1248_bases
ATGGCTATTATCAAACCTTTTAAAGGCGTTCGCCCTCCACAAGACCTGGTTGAACAGGTTGCTTCCCGTCCTTACGATGT
ATTAAACTCAGAAGAAGCGCGTACAGAAGCAGCTGGAAATGAAAAATCCCTTTATCATATCATTAAGCCCGAGATTGACT
TTCCTGTTGGTACGGATGAACACGATGAACGTGTTTATGAGAAAGCTGCCGAAAACTTCCGGCTGTTTCAGGATAAAGGC
TGGTTAGTGCAGGATGCAAAGGAAAACTATTACATCTATGCCCAGACCATGAACGGGAAAACTCAGTATGGACTGGTAGT
AGGCGCTTATGTTCCTGACTATATGAACGGTATCATCAAGAAGCATGAGCTTACCCGTCGTGATAAGGAAGAAGACCGTA
TGAAGCACGTTCGTGTGAACAATGCGAATATCGAACCTGTATTCTTTGCCTATCCCGATAATGCGAAATTGGATACAATC
ATTCGGAAATACACTGCCGAAAAGCCTGTTTACGACTTTATCGCTCCGGGTGATGGCTTCGGACATACTTTCTGGATTGT
TGACCAGGACGAAGATATCGCTGCAATTACTGCAGAATTTGCTAAAATGCCGGCATTATATATTGCCGACGGGCATCATC
GTTCCGCTGCTGCTGCTCTGGTAGGTGCCGAGAAAGCAAAGCAAAACGCGAACCATCGTGGCGATGAAGAGTATAACTAT
TTCATGGCTGTATGTTTCCCTGCCAATCAATTGACTATCATCGACTATAACCGTGTAGTAAAAGACCTCAACGGGCTGAC
TCCCGAACAATTTCTTGCTGCATTGGATAAGAATTTTGTTGTAGAAGAAAAGGGTACAGATATCTATAAACCGTCCGGTT
TGCACAATTTCTCCCTCTATCTTGGCGACAAGTGGTATAGTCTGACGGCAAAGGCAGGTACATACAATGACAATGATCCT
ATCGGCGTGCTTGACGTTACTATTTCTTCCAATCTGATTTTAGATGAGATTTTAGGAATCAAAGACCTCCGTTCGGATAA
GCGTATTGACTTTGTAGGCGGTATCCGCGGTTTGGGAGAATTGAAGAAGCGTGTTGACAGTGGAGAAATGAAAGTAGCTC
TGGCTCTTTATCCCGTATCCATGAAGCAATTGATGGATATTGCCGATACTGGCAACATTATGCCTCCCAAAACGACTTGG
TTTGAACCGAAACTTCGTTCAGGATTGGTTATCCATAAGTTGGATTAA

Upstream 100 bases:

>100_bases
TGGTCATTAAGCAGTATATTTAGAAATATGTTATCAGATTTCGCCCTCGGCTTTTGCGAGGGCGTATCTGTTCTACTAAT
CTTAAAACATACCATGACTT

Downstream 100 bases:

>100_bases
GACATATTCTATATAGAAAATAGAGCGGTCAATCTCTCACAATCAACAGGACATTTGTGAGAGATTGACCGCTTGTTTTT
GTATAAATGACCGCCCGATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MAIIKPFKGVRPPQDLVEQVASRPYDVLNSEEARTEAAGNEKSLYHIIKPEIDFPVGTDEHDERVYEKAAENFRLFQDKG
WLVQDAKENYYIYAQTMNGKTQYGLVVGAYVPDYMNGIIKKHELTRRDKEEDRMKHVRVNNANIEPVFFAYPDNAKLDTI
IRKYTAEKPVYDFIAPGDGFGHTFWIVDQDEDIAAITAEFAKMPALYIADGHHRSAAAALVGAEKAKQNANHRGDEEYNY
FMAVCFPANQLTIIDYNRVVKDLNGLTPEQFLAALDKNFVVEEKGTDIYKPSGLHNFSLYLGDKWYSLTAKAGTYNDNDP
IGVLDVTISSNLILDEILGIKDLRSDKRIDFVGGIRGLGELKKRVDSGEMKVALALYPVSMKQLMDIADTGNIMPPKTTW
FEPKLRSGLVIHKLD

Sequences:

>Translated_415_residues
MAIIKPFKGVRPPQDLVEQVASRPYDVLNSEEARTEAAGNEKSLYHIIKPEIDFPVGTDEHDERVYEKAAENFRLFQDKG
WLVQDAKENYYIYAQTMNGKTQYGLVVGAYVPDYMNGIIKKHELTRRDKEEDRMKHVRVNNANIEPVFFAYPDNAKLDTI
IRKYTAEKPVYDFIAPGDGFGHTFWIVDQDEDIAAITAEFAKMPALYIADGHHRSAAAALVGAEKAKQNANHRGDEEYNY
FMAVCFPANQLTIIDYNRVVKDLNGLTPEQFLAALDKNFVVEEKGTDIYKPSGLHNFSLYLGDKWYSLTAKAGTYNDNDP
IGVLDVTISSNLILDEILGIKDLRSDKRIDFVGGIRGLGELKKRVDSGEMKVALALYPVSMKQLMDIADTGNIMPPKTTW
FEPKLRSGLVIHKLD
>Mature_414_residues
AIIKPFKGVRPPQDLVEQVASRPYDVLNSEEARTEAAGNEKSLYHIIKPEIDFPVGTDEHDERVYEKAAENFRLFQDKGW
LVQDAKENYYIYAQTMNGKTQYGLVVGAYVPDYMNGIIKKHELTRRDKEEDRMKHVRVNNANIEPVFFAYPDNAKLDTII
RKYTAEKPVYDFIAPGDGFGHTFWIVDQDEDIAAITAEFAKMPALYIADGHHRSAAAALVGAEKAKQNANHRGDEEYNYF
MAVCFPANQLTIIDYNRVVKDLNGLTPEQFLAALDKNFVVEEKGTDIYKPSGLHNFSLYLGDKWYSLTAKAGTYNDNDPI
GVLDVTISSNLILDEILGIKDLRSDKRIDFVGGIRGLGELKKRVDSGEMKVALALYPVSMKQLMDIADTGNIMPPKTTWF
EPKLRSGLVIHKLD

Specific function: Unknown

COG id: COG4198

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46883; Mature: 46752

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIIKPFKGVRPPQDLVEQVASRPYDVLNSEEARTEAAGNEKSLYHIIKPEIDFPVGTDE
CCCCCCCCCCCCHHHHHHHHHCCCHHHCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCH
HDERVYEKAAENFRLFQDKGWLVQDAKENYYIYAQTMNGKTQYGLVVGAYVPDYMNGIIK
HHHHHHHHHHHHCEEEECCCCEEEECCCCEEEEEEEECCCEEEEEEEECCCCHHHHHHHH
KHELTRRDKEEDRMKHVRVNNANIEPVFFAYPDNAKLDTIIRKYTAEKPVYDFIAPGDGF
HHHHHHCCCHHHHHHEEEECCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCC
GHTFWIVDQDEDIAAITAEFAKMPALYIADGHHRSAAAALVGAEKAKQNANHRGDEEYNY
CCEEEEEECCCCHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEE
FMAVCFPANQLTIIDYNRVVKDLNGLTPEQFLAALDKNFVVEEKGTDIYKPSGLHNFSLY
EEEEEECCCCEEEEEHHHHHHHHCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEEE
LGDKWYSLTAKAGTYNDNDPIGVLDVTISSNLILDEILGIKDLRSDKRIDFVGGIRGLGE
ECCEEEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHCHHHCCCCCCEEHHHHHHHHHH
LKKRVDSGEMKVALALYPVSMKQLMDIADTGNIMPPKTTWFEPKLRSGLVIHKLD
HHHHCCCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCEEEEECC
>Mature Secondary Structure 
AIIKPFKGVRPPQDLVEQVASRPYDVLNSEEARTEAAGNEKSLYHIIKPEIDFPVGTDE
CCCCCCCCCCCHHHHHHHHHCCCHHHCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCH
HDERVYEKAAENFRLFQDKGWLVQDAKENYYIYAQTMNGKTQYGLVVGAYVPDYMNGIIK
HHHHHHHHHHHHCEEEECCCCEEEECCCCEEEEEEEECCCEEEEEEEECCCCHHHHHHHH
KHELTRRDKEEDRMKHVRVNNANIEPVFFAYPDNAKLDTIIRKYTAEKPVYDFIAPGDGF
HHHHHHCCCHHHHHHEEEECCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCC
GHTFWIVDQDEDIAAITAEFAKMPALYIADGHHRSAAAALVGAEKAKQNANHRGDEEYNY
CCEEEEEECCCCHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEE
FMAVCFPANQLTIIDYNRVVKDLNGLTPEQFLAALDKNFVVEEKGTDIYKPSGLHNFSLY
EEEEEECCCCEEEEEHHHHHHHHCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEEE
LGDKWYSLTAKAGTYNDNDPIGVLDVTISSNLILDEILGIKDLRSDKRIDFVGGIRGLGE
ECCEEEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHCHHHCCCCCCEEHHHHHHHHHH
LKKRVDSGEMKVALALYPVSMKQLMDIADTGNIMPPKTTWFEPKLRSGLVIHKLD
HHHHCCCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA