Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
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Accession | NC_004663 |
Length | 6,260,361 |
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The map label for this gene is 29346544
Identifier: 29346544
GI number: 29346544
Start: 1420174
End: 1420554
Strand: Reverse
Name: 29346544
Synonym: BT_1134
Alternate gene names: NA
Gene position: 1420554-1420174 (Counterclockwise)
Preceding gene: 29346545
Following gene: 29346543
Centisome position: 22.69
GC content: 42.78
Gene sequence:
>381_bases ATGTCGTTGATATATTCCAAATACTTATCCATGAATAGGCGACTTATAATTTTGTCTCAGGCAAATATCGAGACACACTC CCGAATGAGGTCTTCCATGATTTTAAAAGACTCCGTATTTCGGAAGGAACAACGTACACATACAATTTCTCCGGAACGGC CGACTTTCCTGTCACTTCCCTGTAATCCTCCCCAAAATCAACACCGCCGTATAAACTGCATGAAAGCCCGGGCACGCTTC CTGTTTCCAATCCCATATCTGCTCCTTCCGCAACATCACGTATTGCCGTTCTCATTTCGTATCCTTGAATATTTCTCCAA ACATACCAAAGACAGAAAAGCTGCATGGAATCTAAATTCTCACCGGACAGACAATAGATAG
Upstream 100 bases:
>100_bases GATGTCTTCAAGTTTTCCACACTTGTTTTAGAATAGTCCGCATTATCAGCAGATTGCGAGTTTCAGTCTGCCGTTCCGAT TCTCTTTATTGCATCGTAGC
Downstream 100 bases:
>100_bases AAGGAAGGAATCCATCATCCTCATTTCTTGCGGCAAAAATAGTTGTTTTTCAGGCCGGTCCCGCAAGGCGGCCCTTCGGG CTGGTTGCACGTGAAAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MSLIYSKYLSMNRRLIILSQANIETHSRMRSSMILKDSVFRKEQRTHTISPERPTFLSLPCNPPQNQHRRINCMKARARF LFPIPYLLLPQHHVLPFSFRILEYFSKHTKDRKAAWNLNSHRTDNR
Sequences:
>Translated_126_residues MSLIYSKYLSMNRRLIILSQANIETHSRMRSSMILKDSVFRKEQRTHTISPERPTFLSLPCNPPQNQHRRINCMKARARF LFPIPYLLLPQHHVLPFSFRILEYFSKHTKDRKAAWNLNSHRTDNR >Mature_125_residues SLIYSKYLSMNRRLIILSQANIETHSRMRSSMILKDSVFRKEQRTHTISPERPTFLSLPCNPPQNQHRRINCMKARARFL FPIPYLLLPQHHVLPFSFRILEYFSKHTKDRKAAWNLNSHRTDNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15134; Mature: 15003
Theoretical pI: Translated: 11.67; Mature: 11.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLIYSKYLSMNRRLIILSQANIETHSRMRSSMILKDSVFRKEQRTHTISPERPTFLSLP CCCHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEC CNPPQNQHRRINCMKARARFLFPIPYLLLPQHHVLPFSFRILEYFSKHTKDRKAAWNLNS CCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCHHCCCCCC HRTDNR CCCCCC >Mature Secondary Structure SLIYSKYLSMNRRLIILSQANIETHSRMRSSMILKDSVFRKEQRTHTISPERPTFLSLP CCHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEC CNPPQNQHRRINCMKARARFLFPIPYLLLPQHHVLPFSFRILEYFSKHTKDRKAAWNLNS CCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCHHCCCCCC HRTDNR CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA