Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29346543

Identifier: 29346543

GI number: 29346543

Start: 1419376

End: 1419936

Strand: Reverse

Name: 29346543

Synonym: BT_1133

Alternate gene names: NA

Gene position: 1419936-1419376 (Counterclockwise)

Preceding gene: 29346544

Following gene: 29346537

Centisome position: 22.68

GC content: 51.16

Gene sequence:

>561_bases
ATGGCAGACAAGAGCGCAGAAAAGGAAAGACTGTTCAACGAGTGGTTCACTGCATCCTATGACAGGTTGAGAGGGACGTT
ACGCCGGTACGGAATGCTGGACGAGGACAATTTCCATGACACCTACCTTTTTGTAAGAAGGCAGGTGCTGGTTCCCGGAA
AGGACATAACGGACTATGACGCGTATTTCATCGGATGCTACAAAAAGGCGGCCCTGGTAAAGATTAAAAGGGAGAATCGG
TATGCACACCCTGAAGATGATTTCTTCCTCCGATGTGGCGAAGAGGCAAAATTCCTTTCCGAGGACGACCTGAACGGGTG
CGAGCGGCTGGTAAGAGACATACTGCGTTTCGTAAGGCAGAAGTTCTCCTACGAGGAGTACCGGATGTTCATGCTCAGGT
TCTATGAGGCGCAGTTCTCGTTCAAGGCACTGGCGGAATGCATGGGTATCTCGGCATCGGCCATATCGCAGAAAGTATGC
AGGATAGTGGACGCGGTACGTACCCACAGCGGTTTCGCATGGAGAAGTCAGATGCTGGCGGTGGAAAGCTTCATGTATTG
A

Upstream 100 bases:

>100_bases
AAGCCTTGCCGGAGACCGCCGAAAAACAAACTGGAGGAAGCACAAGAAATAAGAATGCCTACCCGTGTAGGCCATGTATA
ACTCAAAAAAATATAAAGCT

Downstream 100 bases:

>100_bases
AAAAATTGTTTAACGGAAAAGTAAGAAAGTTATGGCACTGATAGTATACAACAGGGAAAACTCCCGTCCGCAGGAAGTCA
CATACAAGGGAAAGCGGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MADKSAEKERLFNEWFTASYDRLRGTLRRYGMLDEDNFHDTYLFVRRQVLVPGKDITDYDAYFIGCYKKAALVKIKRENR
YAHPEDDFFLRCGEEAKFLSEDDLNGCERLVRDILRFVRQKFSYEEYRMFMLRFYEAQFSFKALAECMGISASAISQKVC
RIVDAVRTHSGFAWRSQMLAVESFMY

Sequences:

>Translated_186_residues
MADKSAEKERLFNEWFTASYDRLRGTLRRYGMLDEDNFHDTYLFVRRQVLVPGKDITDYDAYFIGCYKKAALVKIKRENR
YAHPEDDFFLRCGEEAKFLSEDDLNGCERLVRDILRFVRQKFSYEEYRMFMLRFYEAQFSFKALAECMGISASAISQKVC
RIVDAVRTHSGFAWRSQMLAVESFMY
>Mature_185_residues
ADKSAEKERLFNEWFTASYDRLRGTLRRYGMLDEDNFHDTYLFVRRQVLVPGKDITDYDAYFIGCYKKAALVKIKRENRY
AHPEDDFFLRCGEEAKFLSEDDLNGCERLVRDILRFVRQKFSYEEYRMFMLRFYEAQFSFKALAECMGISASAISQKVCR
IVDAVRTHSGFAWRSQMLAVESFMY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22141; Mature: 22009

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADKSAEKERLFNEWFTASYDRLRGTLRRYGMLDEDNFHDTYLFVRRQVLVPGKDITDYD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHH
AYFIGCYKKAALVKIKRENRYAHPEDDFFLRCGEEAKFLSEDDLNGCERLVRDILRFVRQ
HHHHHHHHHHHHHEECCCCCCCCCCCCCEEECCCHHCCCCCCCCHHHHHHHHHHHHHHHH
KFSYEEYRMFMLRFYEAQFSFKALAECMGISASAISQKVCRIVDAVRTHSGFAWRSQMLA
HHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VESFMY
HHHHCC
>Mature Secondary Structure 
ADKSAEKERLFNEWFTASYDRLRGTLRRYGMLDEDNFHDTYLFVRRQVLVPGKDITDYD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHH
AYFIGCYKKAALVKIKRENRYAHPEDDFFLRCGEEAKFLSEDDLNGCERLVRDILRFVRQ
HHHHHHHHHHHHHEECCCCCCCCCCCCCEEECCCHHCCCCCCCCHHHHHHHHHHHHHHHH
KFSYEEYRMFMLRFYEAQFSFKALAECMGISASAISQKVCRIVDAVRTHSGFAWRSQMLA
HHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VESFMY
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA