Click here to switch to the map view.

The map label for this gene is oadB [H]

Identifier: 29143599

GI number: 29143599

Start: 3357836

End: 3359137

Strand: Reverse

Name: oadB [H]

Synonym: t3266

Alternate gene names: 29143599

Gene position: 3359137-3357836 (Counterclockwise)

Preceding gene: 29143600

Following gene: 29143595

Centisome position: 70.1

GC content: 63.59

Gene sequence:

>1302_bases
ATGGAAAGTCTGAACGCCCTGCTTCAGGGCATGGGGCTGATGCACCTTGGCGCGGGCCAGGCCATCATGCTGCTGGTCAG
CCTGCTGTTGCTGTGGCTGGCGATAGCGAAAAAGTTCGAACCGTTACTGCTGCTGCCGATAGGCTTCGGCGGCCTGCTCT
CCAACATCCCGGAAGCGGGCATGGCGCTGACCGCGCTGGAGAGCCTGCTGGCCCATCACGACGCCGGGCAGCTGGCGGTG
ATTGCCGCGAAGCTCAACTGCGCGCCGGACGTGCACGCCATCAAGGAAGCGCTGGCGCTGGCCCTGCCGTCAGTCCAGAA
CCAGATGGAAAATCTGGCGGTGGACATGGGCTACACGCCGGGGGTGCTGGCGCTGTTCTATAAAGTGGCGATTGGCTCCG
GCGTCGCGCCGCTGGTCATCTTTATGGGCGTCGGCGCGATGACCGACTTCGGCCCGCTGCTGGCCAATCCGCGCACCCTG
CTGCTGGGGGCGGCGGCACAGTTCGGCATCTTCGCCACCGTACTGGGGGCGCTGACGCTGAACTACTTCGGCCTGATTGC
CTTCACCCTGCCGCAGGCGGCGGCCATCGGCATTATCGGCGGCGCGGACGGCCCGACGGCGATTTATCTGTCGGGCAAGC
TGGCACCGGAGCTGCTGGGGGCCATTGCGGTGGCGGCCTACTCGTATATGGCGCTGGTGCCGTTAATCCAGCCGCCGATT
ATGCGCGCGCTGACCAGCGAGAAAGAGCGCAAAATCCGCATGGTGCAGCTGCGCACGGTGAGTAAGCGGGAAAAAATCCT
CTTTCCGGTGGTGCTGTTACTGCTGGTGGCCCTGCTGCTGCCGGACGCCGCGCCGCTGCTGGGGATGTTCTGCTTCGGCA
ATCTGATGCGTGAAAGCGGGGTGGTGGAGCGTCTGAGCGACACGGTGCAGAACGGTCTGATTAATATCGTGACCATTTTC
CTCGGGCTGTCGGTGGGCGCGAAGCTGGTCGCGGATAAGTTCCTGCAGCCGCAGATGCTGGGCATTCTGCTGCTGGGGGT
GATTGCCTTTGGTATCGGGACGGCGGCCGGGGTGCTGATGGCGAAGCTGCTGAACCTGTGCAGTAAGAACAAAATCAACC
CGCTGATAGGTTCAGCCGGGGTGTCGGCAGTGCCGATGGCAGCCAGGGTGTCGAACAAGGTGGGCCTGGAGTCGAACCCG
CAGAACTTCCTGCTGATGCACGCGATGGGGCCGAACGTGGCCGGGGTTATCGGTTCGGCCATTGCGGCGGGCGTGATGCT
GAAGTACGTGCTGGCAATGTAA

Upstream 100 bases:

>100_bases
CGCCGCGCAGGCCGGCACCGTCCGCGGTATCGCGGTGAAGTCCGGGGACGCCGTCTCCGTGGGCGACACCCTGATGACGC
TGGCGTAACGGAGAACTGAA

Downstream 100 bases:

>100_bases
TCCAATTCTAATCGGGAGCAGTGATTATGCTCCCGCAAAATGAGGACACAGTAATGAGTGAAATGGTTGCGTTTCGGCAA
GGTACATCCATGCCATCCAG

Product: oxaloacetate decarboxylase subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MESLNALLQGMGLMHLGAGQAIMLLVSLLLLWLAIAKKFEPLLLLPIGFGGLLSNIPEAGMALTALESLLAHHDAGQLAV
IAAKLNCAPDVHAIKEALALALPSVQNQMENLAVDMGYTPGVLALFYKVAIGSGVAPLVIFMGVGAMTDFGPLLANPRTL
LLGAAAQFGIFATVLGALTLNYFGLIAFTLPQAAAIGIIGGADGPTAIYLSGKLAPELLGAIAVAAYSYMALVPLIQPPI
MRALTSEKERKIRMVQLRTVSKREKILFPVVLLLLVALLLPDAAPLLGMFCFGNLMRESGVVERLSDTVQNGLINIVTIF
LGLSVGAKLVADKFLQPQMLGILLLGVIAFGIGTAAGVLMAKLLNLCSKNKINPLIGSAGVSAVPMAARVSNKVGLESNP
QNFLLMHAMGPNVAGVIGSAIAAGVMLKYVLAM

Sequences:

>Translated_433_residues
MESLNALLQGMGLMHLGAGQAIMLLVSLLLLWLAIAKKFEPLLLLPIGFGGLLSNIPEAGMALTALESLLAHHDAGQLAV
IAAKLNCAPDVHAIKEALALALPSVQNQMENLAVDMGYTPGVLALFYKVAIGSGVAPLVIFMGVGAMTDFGPLLANPRTL
LLGAAAQFGIFATVLGALTLNYFGLIAFTLPQAAAIGIIGGADGPTAIYLSGKLAPELLGAIAVAAYSYMALVPLIQPPI
MRALTSEKERKIRMVQLRTVSKREKILFPVVLLLLVALLLPDAAPLLGMFCFGNLMRESGVVERLSDTVQNGLINIVTIF
LGLSVGAKLVADKFLQPQMLGILLLGVIAFGIGTAAGVLMAKLLNLCSKNKINPLIGSAGVSAVPMAARVSNKVGLESNP
QNFLLMHAMGPNVAGVIGSAIAAGVMLKYVLAM
>Mature_433_residues
MESLNALLQGMGLMHLGAGQAIMLLVSLLLLWLAIAKKFEPLLLLPIGFGGLLSNIPEAGMALTALESLLAHHDAGQLAV
IAAKLNCAPDVHAIKEALALALPSVQNQMENLAVDMGYTPGVLALFYKVAIGSGVAPLVIFMGVGAMTDFGPLLANPRTL
LLGAAAQFGIFATVLGALTLNYFGLIAFTLPQAAAIGIIGGADGPTAIYLSGKLAPELLGAIAVAAYSYMALVPLIQPPI
MRALTSEKERKIRMVQLRTVSKREKILFPVVLLLLVALLLPDAAPLLGMFCFGNLMRESGVVERLSDTVQNGLINIVTIF
LGLSVGAKLVADKFLQPQMLGILLLGVIAFGIGTAAGVLMAKLLNLCSKNKINPLIGSAGVSAVPMAARVSNKVGLESNP
QNFLLMHAMGPNVAGVIGSAIAAGVMLKYVLAM

Specific function: Lyase and sodium transporter [H]

COG id: COG1883

COG function: function code C; Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gcdB/mmdB/oadB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005661 [H]

Pfam domain/function: PF03977 OAD_beta [H]

EC number: =4.1.1.3 [H]

Molecular weight: Translated: 44995; Mature: 44995

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESLNALLQGMGLMHLGAGQAIMLLVSLLLLWLAIAKKFEPLLLLPIGFGGLLSNIPEAG
CCHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCH
MALTALESLLAHHDAGQLAVIAAKLNCAPDVHAIKEALALALPSVQNQMENLAVDMGYTP
HHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GVLALFYKVAIGSGVAPLVIFMGVGAMTDFGPLLANPRTLLLGAAAQFGIFATVLGALTL
HHHHHHHHHHHCCCHHHHHHHHHCCHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
NYFGLIAFTLPQAAAIGIIGGADGPTAIYLSGKLAPELLGAIAVAAYSYMALVPLIQPPI
HHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCHHH
MRALTSEKERKIRMVQLRTVSKREKILFPVVLLLLVALLLPDAAPLLGMFCFGNLMRESG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VVERLSDTVQNGLINIVTIFLGLSVGAKLVADKFLQPQMLGILLLGVIAFGIGTAAGVLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
AKLLNLCSKNKINPLIGSAGVSAVPMAARVSNKVGLESNPQNFLLMHAMGPNVAGVIGSA
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHH
IAAGVMLKYVLAM
HHHHHHHHHHHHC
>Mature Secondary Structure
MESLNALLQGMGLMHLGAGQAIMLLVSLLLLWLAIAKKFEPLLLLPIGFGGLLSNIPEAG
CCHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCH
MALTALESLLAHHDAGQLAVIAAKLNCAPDVHAIKEALALALPSVQNQMENLAVDMGYTP
HHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GVLALFYKVAIGSGVAPLVIFMGVGAMTDFGPLLANPRTLLLGAAAQFGIFATVLGALTL
HHHHHHHHHHHCCCHHHHHHHHHCCHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
NYFGLIAFTLPQAAAIGIIGGADGPTAIYLSGKLAPELLGAIAVAAYSYMALVPLIQPPI
HHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCHHH
MRALTSEKERKIRMVQLRTVSKREKILFPVVLLLLVALLLPDAAPLLGMFCFGNLMRESG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VVERLSDTVQNGLINIVTIFLGLSVGAKLVADKFLQPQMLGILLLGVIAFGIGTAAGVLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
AKLLNLCSKNKINPLIGSAGVSAVPMAARVSNKVGLESNPQNFLLMHAMGPNVAGVIGSA
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHH
IAAGVMLKYVLAM
HHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]