| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is oadA [H]
Identifier: 29143600
GI number: 29143600
Start: 3359150
End: 3360925
Strand: Reverse
Name: oadA [H]
Synonym: t3267
Alternate gene names: 29143600
Gene position: 3360925-3359150 (Counterclockwise)
Preceding gene: 29143601
Following gene: 29143599
Centisome position: 70.14
GC content: 64.02
Gene sequence:
>1776_bases ATGACTATTGCCATTACCGACGTCGTCCTGCGTGACGCCCACCAGTCTCTGTTCGCCACCCGCCTGCGCCTTGACGATAT GCTGCCGATTGCCGCTCAGCTCGACGACGTGGGCTACGGCTCGCTGGAGTGCTGGGGCGGCGCCACCTTTGACGCCTGTA TTCGTTTTCTCGGCGAAGACCCGTGGCTGCGCCTGCGCGAACTCAAAAAAGCCATGCCCAAAACCCCGCTGCAGATGCTG CTGCGCGGCCAGAACCTGCTCGGCTACCGCCACTACGCCGATGATGTGGTGGAGCGCTTCGTTGAACGCGCGGTGAAAAA CGGCATGGATGTGTTCCGCGTCTTCGATGCCATGAACGACCCGCGCAATATGAAAGCCGCCCTGCAGGCGGTGCGCAGCC ACGGCGCGCACGCCCAGGGGACGCTCTCCTACACCACCAGCCCGGCGCACACCCTGCAGACCTGGCTGGACCTGACCGAA CAGTTGTTAGAGACCGGCGTTGACTCGATTGCCATCAAGGATATGTCCGGCATTCTCACGCCGATGGCCGCTTTTGAGCT GGTGAGCGAAATCAAAAAACGTTTTGAGGTGCGCCTGCACCTGCACTGTCACGCCACCACCGGGATGGCGGAGATGGCCC TGCTGAAGGCTATCGAGGCGGGTGTTGACGGCGTGGACACGGCGATTTCGTCCATGAGCGCCACCTACGGCCACCCGGCC ACCGAGGCGCTGGTGGCGACGTTGGCAGGTACTGAGCACGACACCGGGCTGGATATCCTGAAGCTGGAAAATATCGCCGC GTACTTCCGCGAGGTGCGCAAAAAGTACCATGCCTTTGAAGGCCAGCTGAAAGGCTACGACAGCCGTATTCTGGTGGCGC AGGTACCGGGCGGGATGCTGACCAACCTCGAAAGCCAGCTGAAGCAGCAGAACGCGGCGGACAGGCTGGACCAGGTGCTG GCGGAAATCCCCCGCGTGCGCGAGGACCTCGGCTTTATCCCGCTGGTCACCCCGACCTCGCAGATTGTCGGCACCCAGGC GGTGCTCAACGTCCTGACCGGCGAACGCTACAAAACCATCGCGAAGGAAACCGCCGGCATTCTGAAAGGCGAATACGGCC ACACCCCGGTGCCGGTTAACGCCGCGTTACAGGCCCGCGTGCTGGAAGGGAGCGCTCCGGTGACCTGCCGCCCGGCGGAC CTGCTGAAGCCGGAGCTGGCTGAACTGGAAGCGGACGTCAGGCGCCAGGCGCAGGAGAAGGGGATTACTCTGGCGGGAAA CGCCATCGACGACGTGCTCACCGTGGCGCTGTTCCCGCAAATCGGCCTCAAATTCCTTGAGAACCGCCATAACCCGGCGG CGTTTGAGCCACTGCCGCAGGCGGAAGCCGCGCAGCCGGTGGCAAAAGCAGAGAAGCCTGCCGCCTCCGGTATCTACACC GTGGAAGTGGAAGGCAAAGCCTTTGTGGTGAGGGTCAGCGACGGCGGCGATATCAGCCAGCTTACTACGGCTGTTCCGGC GGCCTCTTCCGCACCGGTTCAGGCTGCCGCCCCGGCAGGCGCCGGCACCCCGGTCACCGCGCCGCTGGCGGGCAACATCT GGAAGGTGATTGCCACCGAAGGCCAGAGCGTGGCCGAAGGCGACGTGCTGCTGATTCTGGAAGCCATGAAGATGGAAACC GAAATCCGCGCCGCGCAGGCCGGCACCGTCCGCGGTATCGCGGTGAAGTCCGGGGACGCCGTCTCCGTGGGCGACACCCT GATGACGCTGGCGTAA
Upstream 100 bases:
>100_bases GCGCGCCGTTCCCGCCGTGGACGACTTCACCCGCTTAAAGCCGGTGATTGCCGCCGCCATTCACCATCACCGCCTTAACG CTTAATTCCCGGAGGGATCC
Downstream 100 bases:
>100_bases CGGAGAACTGAAATGGAAAGTCTGAACGCCCTGCTTCAGGGCATGGGGCTGATGCACCTTGGCGCGGGCCAGGCCATCAT GCTGCTGGTCAGCCTGCTGT
Product: oxaloacetate decarboxylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 591; Mature: 590
Protein sequence:
>591_residues MTIAITDVVLRDAHQSLFATRLRLDDMLPIAAQLDDVGYGSLECWGGATFDACIRFLGEDPWLRLRELKKAMPKTPLQML LRGQNLLGYRHYADDVVERFVERAVKNGMDVFRVFDAMNDPRNMKAALQAVRSHGAHAQGTLSYTTSPAHTLQTWLDLTE QLLETGVDSIAIKDMSGILTPMAAFELVSEIKKRFEVRLHLHCHATTGMAEMALLKAIEAGVDGVDTAISSMSATYGHPA TEALVATLAGTEHDTGLDILKLENIAAYFREVRKKYHAFEGQLKGYDSRILVAQVPGGMLTNLESQLKQQNAADRLDQVL AEIPRVREDLGFIPLVTPTSQIVGTQAVLNVLTGERYKTIAKETAGILKGEYGHTPVPVNAALQARVLEGSAPVTCRPAD LLKPELAELEADVRRQAQEKGITLAGNAIDDVLTVALFPQIGLKFLENRHNPAAFEPLPQAEAAQPVAKAEKPAASGIYT VEVEGKAFVVRVSDGGDISQLTTAVPAASSAPVQAAAPAGAGTPVTAPLAGNIWKVIATEGQSVAEGDVLLILEAMKMET EIRAAQAGTVRGIAVKSGDAVSVGDTLMTLA
Sequences:
>Translated_591_residues MTIAITDVVLRDAHQSLFATRLRLDDMLPIAAQLDDVGYGSLECWGGATFDACIRFLGEDPWLRLRELKKAMPKTPLQML LRGQNLLGYRHYADDVVERFVERAVKNGMDVFRVFDAMNDPRNMKAALQAVRSHGAHAQGTLSYTTSPAHTLQTWLDLTE QLLETGVDSIAIKDMSGILTPMAAFELVSEIKKRFEVRLHLHCHATTGMAEMALLKAIEAGVDGVDTAISSMSATYGHPA TEALVATLAGTEHDTGLDILKLENIAAYFREVRKKYHAFEGQLKGYDSRILVAQVPGGMLTNLESQLKQQNAADRLDQVL AEIPRVREDLGFIPLVTPTSQIVGTQAVLNVLTGERYKTIAKETAGILKGEYGHTPVPVNAALQARVLEGSAPVTCRPAD LLKPELAELEADVRRQAQEKGITLAGNAIDDVLTVALFPQIGLKFLENRHNPAAFEPLPQAEAAQPVAKAEKPAASGIYT VEVEGKAFVVRVSDGGDISQLTTAVPAASSAPVQAAAPAGAGTPVTAPLAGNIWKVIATEGQSVAEGDVLLILEAMKMET EIRAAQAGTVRGIAVKSGDAVSVGDTLMTLA >Mature_590_residues TIAITDVVLRDAHQSLFATRLRLDDMLPIAAQLDDVGYGSLECWGGATFDACIRFLGEDPWLRLRELKKAMPKTPLQMLL RGQNLLGYRHYADDVVERFVERAVKNGMDVFRVFDAMNDPRNMKAALQAVRSHGAHAQGTLSYTTSPAHTLQTWLDLTEQ LLETGVDSIAIKDMSGILTPMAAFELVSEIKKRFEVRLHLHCHATTGMAEMALLKAIEAGVDGVDTAISSMSATYGHPAT EALVATLAGTEHDTGLDILKLENIAAYFREVRKKYHAFEGQLKGYDSRILVAQVPGGMLTNLESQLKQQNAADRLDQVLA EIPRVREDLGFIPLVTPTSQIVGTQAVLNVLTGERYKTIAKETAGILKGEYGHTPVPVNAALQARVLEGSAPVTCRPADL LKPELAELEADVRRQAQEKGITLAGNAIDDVLTVALFPQIGLKFLENRHNPAAFEPLPQAEAAQPVAKAEKPAASGIYTV EVEGKAFVVRVSDGGDISQLTTAVPAASSAPVQAAAPAGAGTPVTAPLAGNIWKVIATEGQSVAEGDVLLILEAMKMETE IRAAQAGTVRGIAVKSGDAVSVGDTLMTLA
Specific function: Lyase and sodium transporter [H]
COG id: COG5016
COG function: function code C; Pyruvate/oxaloacetate carboxyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotinyl-binding domain [H]
Homologues:
Organism=Homo sapiens, GI106049528, Length=628, Percent_Identity=33.2802547770701, Blast_Score=281, Evalue=2e-75, Organism=Homo sapiens, GI106049295, Length=628, Percent_Identity=33.2802547770701, Blast_Score=281, Evalue=2e-75, Organism=Homo sapiens, GI106049292, Length=628, Percent_Identity=33.2802547770701, Blast_Score=281, Evalue=2e-75, Organism=Caenorhabditis elegans, GI17562816, Length=624, Percent_Identity=34.2948717948718, Blast_Score=313, Evalue=2e-85, Organism=Saccharomyces cerevisiae, GI6319695, Length=629, Percent_Identity=32.4324324324324, Blast_Score=302, Evalue=1e-82, Organism=Saccharomyces cerevisiae, GI6321376, Length=629, Percent_Identity=31.637519872814, Blast_Score=291, Evalue=2e-79, Organism=Drosophila melanogaster, GI24652212, Length=635, Percent_Identity=31.6535433070866, Blast_Score=286, Evalue=3e-77, Organism=Drosophila melanogaster, GI24652210, Length=635, Percent_Identity=31.6535433070866, Blast_Score=286, Evalue=3e-77, Organism=Drosophila melanogaster, GI24652214, Length=635, Percent_Identity=31.6535433070866, Blast_Score=286, Evalue=3e-77, Organism=Drosophila melanogaster, GI19921944, Length=635, Percent_Identity=31.6535433070866, Blast_Score=286, Evalue=3e-77, Organism=Drosophila melanogaster, GI24652216, Length=635, Percent_Identity=31.6535433070866, Blast_Score=286, Evalue=3e-77, Organism=Drosophila melanogaster, GI281363050, Length=635, Percent_Identity=31.6535433070866, Blast_Score=286, Evalue=3e-77, Organism=Drosophila melanogaster, GI24652224, Length=635, Percent_Identity=31.6535433070866, Blast_Score=286, Evalue=3e-77, Organism=Drosophila melanogaster, GI24652222, Length=635, Percent_Identity=31.6535433070866, Blast_Score=286, Evalue=3e-77, Organism=Drosophila melanogaster, GI24652220, Length=635, Percent_Identity=31.6535433070866, Blast_Score=286, Evalue=3e-77, Organism=Drosophila melanogaster, GI24652218, Length=635, Percent_Identity=31.6535433070866, Blast_Score=286, Evalue=3e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001882 - InterPro: IPR000089 - InterPro: IPR003379 - InterPro: IPR005776 - InterPro: IPR000891 - InterPro: IPR011053 [H]
Pfam domain/function: PF00364 Biotin_lipoyl; PF00682 HMGL-like; PF02436 PYC_OADA [H]
EC number: =4.1.1.3 [H]
Molecular weight: Translated: 63373; Mature: 63242
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: PS50991 PYR_CT ; PS50968 BIOTINYL_LIPOYL ; PS00188 BIOTIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIAITDVVLRDAHQSLFATRLRLDDMLPIAAQLDDVGYGSLECWGGATFDACIRFLGED CEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEECCCCCHHHHHHHHCCC PWLRLRELKKAMPKTPLQMLLRGQNLLGYRHYADDVVERFVERAVKNGMDVFRVFDAMND CHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC PRNMKAALQAVRSHGAHAQGTLSYTTSPAHTLQTWLDLTEQLLETGVDSIAIKDMSGILT CHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHH PMAAFELVSEIKKRFEVRLHLHCHATTGMAEMALLKAIEAGVDGVDTAISSMSATYGHPA HHHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCH TEALVATLAGTEHDTGLDILKLENIAAYFREVRKKYHAFEGQLKGYDSRILVAQVPGGML HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHH TNLESQLKQQNAADRLDQVLAEIPRVREDLGFIPLVTPTSQIVGTQAVLNVLTGERYKTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCHHHHHH AKETAGILKGEYGHTPVPVNAALQARVLEGSAPVTCRPADLLKPELAELEADVRRQAQEK HHHHHHHHCCCCCCCCCCCCHHHHHEEECCCCCCEECCHHHCCHHHHHHHHHHHHHHHHC GITLAGNAIDDVLTVALFPQIGLKFLENRHNPAAFEPLPQAEAAQPVAKAEKPAASGIYT CCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHCCCCCCCCEEE VEVEGKAFVVRVSDGGDISQLTTAVPAASSAPVQAAAPAGAGTPVTAPLAGNIWKVIATE EEECCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEECC GQSVAEGDVLLILEAMKMETEIRAAQAGTVRGIAVKSGDAVSVGDTLMTLA CCCCCCCCEEEEEHHHHHHHHHHHHHCCCEEEEEEECCCCEECCCHHHHCC >Mature Secondary Structure TIAITDVVLRDAHQSLFATRLRLDDMLPIAAQLDDVGYGSLECWGGATFDACIRFLGED EEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEECCCCCHHHHHHHHCCC PWLRLRELKKAMPKTPLQMLLRGQNLLGYRHYADDVVERFVERAVKNGMDVFRVFDAMND CHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC PRNMKAALQAVRSHGAHAQGTLSYTTSPAHTLQTWLDLTEQLLETGVDSIAIKDMSGILT CHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHH PMAAFELVSEIKKRFEVRLHLHCHATTGMAEMALLKAIEAGVDGVDTAISSMSATYGHPA HHHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCH TEALVATLAGTEHDTGLDILKLENIAAYFREVRKKYHAFEGQLKGYDSRILVAQVPGGML HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHH TNLESQLKQQNAADRLDQVLAEIPRVREDLGFIPLVTPTSQIVGTQAVLNVLTGERYKTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCHHHHHH AKETAGILKGEYGHTPVPVNAALQARVLEGSAPVTCRPADLLKPELAELEADVRRQAQEK HHHHHHHHCCCCCCCCCCCCHHHHHEEECCCCCCEECCHHHCCHHHHHHHHHHHHHHHHC GITLAGNAIDDVLTVALFPQIGLKFLENRHNPAAFEPLPQAEAAQPVAKAEKPAASGIYT CCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHCCCCCCCCEEE VEVEGKAFVVRVSDGGDISQLTTAVPAASSAPVQAAAPAGAGTPVTAPLAGNIWKVIATE EEECCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEECC GQSVAEGDVLLILEAMKMETEIRAAQAGTVRGIAVKSGDAVSVGDTLMTLA CCCCCCCCEEEEEHHHHHHHHHHHHHCCCEEEEEEECCCCEECCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2454915 [H]