Click here to switch to the map view.

The map label for this gene is cfa [H]

Identifier: 29141754

GI number: 29141754

Start: 1358641

End: 1359789

Strand: Reverse

Name: cfa [H]

Synonym: t1295

Alternate gene names: 29141754

Gene position: 1359789-1358641 (Counterclockwise)

Preceding gene: 29141755

Following gene: 29141752

Centisome position: 28.38

GC content: 48.83

Gene sequence:

>1149_bases
ATGAGTTCATCGTGTATAGAAGAAGTCAGCGTACCGGATGATAACTGGTACCGAATCGCCAACGAATTGTTAAGTCGTGC
GGATATTACAATTAATGGTTCCGCCCCGTCTGACATTCGTGTTAAGAATCCCGATTTTTTTAAACGCGTCCTCCAGGAAG
GATCGTTGGGGTTAGGTGAGAGTTACATGGATGGCTGGTGGGAATGCGAGCGTCTGGATATTTTCTTCAGCAAAGTCTTA
CGTGCCGGTCTTGAAAATCAACTCCCCCACCATGTCAAAGATACGCTCCGTATCCTCGGCGCGCGTCTGATTAATCTACA
AAGTAAAAAACGCGCCTGGATTGTCGGCAAGGAACATTACGATCTTGGTAATGACCTTTTTTCCCGTATGCTCGATCCCT
ATATGCAATATTCTTGCGCCTACTGGAAAGATGCCGATACGCTGGAAGCGGCACAGCAAGCCAAGCTGAAATTAATTTGC
GAAAAGCTACAGCTACAACCGGGGATGCGTGTGCTGGATATCGGCTGCGGCTGGGGCGGCCTGTCGCAATATATGGCGAC
CCATTATGGCGTTAGCGTGGTGGGCGTAACGATCTCCGCTGAACAACAAAAAATGGCGCAGACGCGTTGCGAAGGTCTGG
ATGTCTCCATTCTCCTGGAAGATTATCGCGACCTTAACGATCAGTTTGACCGAATCGTCTCCGTCGGCATGTTCGAACAT
GTCGGGCCAAAAAACTACAACACCTATTTTGAAGTTGTTGACAGGAATTTAAAACCGGATGGTCTTTTCCTGCTCCATAC
TATTGGTTCTAAAAAAACCGATCATAATGTCGATCCGTGGATCAATAAGTATATTTTCCCCAACGGTTGCTTGCCGTCTG
TTCGTCAAATCGCCGAGGCCAGCGAATCACACTTTGTAATGGAAGACTGGCATAACTTTGGCGCCGACTATGACACGACT
CTGATGGCGTGGCATGAGCGCTTTATCAATGCCTGGCCAGAGATTGCGGGCAATTATAACGAGCGCTTTAAACGTATGTT
CAGCTATTATCTCAACGCCTGCGCGGGTGCGTTTCGCGCGCGTGATATCCAGCTTTGGCAGGTGGTATTTACGCGCGGCG
TTGAAAACGGTCTGCGCGTTCCTCGCTAA

Upstream 100 bases:

>100_bases
GATAACTGGCTCACGGAATTGTCCGTGGGATTTCTCACAAAGCCAAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCAC
CGTCCAGTGATGGAGAAACT

Downstream 100 bases:

>100_bases
TCATCTCCCCCGCATTTCATGCGGGGGAATCTTATTTTCCGTTAGCCAATGTCGGCCTGATTTCTGACCACATTTTCTCG
TGTAGCCAGTACGCGTTCTA

Product: cyclopropane fatty acyl phospholipid synthase

Products: NA

Alternate protein names: CFA synthase; Cyclopropane fatty acid synthase [H]

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MSSSCIEEVSVPDDNWYRIANELLSRADITINGSAPSDIRVKNPDFFKRVLQEGSLGLGESYMDGWWECERLDIFFSKVL
RAGLENQLPHHVKDTLRILGARLINLQSKKRAWIVGKEHYDLGNDLFSRMLDPYMQYSCAYWKDADTLEAAQQAKLKLIC
EKLQLQPGMRVLDIGCGWGGLSQYMATHYGVSVVGVTISAEQQKMAQTRCEGLDVSILLEDYRDLNDQFDRIVSVGMFEH
VGPKNYNTYFEVVDRNLKPDGLFLLHTIGSKKTDHNVDPWINKYIFPNGCLPSVRQIAEASESHFVMEDWHNFGADYDTT
LMAWHERFINAWPEIAGNYNERFKRMFSYYLNACAGAFRARDIQLWQVVFTRGVENGLRVPR

Sequences:

>Translated_382_residues
MSSSCIEEVSVPDDNWYRIANELLSRADITINGSAPSDIRVKNPDFFKRVLQEGSLGLGESYMDGWWECERLDIFFSKVL
RAGLENQLPHHVKDTLRILGARLINLQSKKRAWIVGKEHYDLGNDLFSRMLDPYMQYSCAYWKDADTLEAAQQAKLKLIC
EKLQLQPGMRVLDIGCGWGGLSQYMATHYGVSVVGVTISAEQQKMAQTRCEGLDVSILLEDYRDLNDQFDRIVSVGMFEH
VGPKNYNTYFEVVDRNLKPDGLFLLHTIGSKKTDHNVDPWINKYIFPNGCLPSVRQIAEASESHFVMEDWHNFGADYDTT
LMAWHERFINAWPEIAGNYNERFKRMFSYYLNACAGAFRARDIQLWQVVFTRGVENGLRVPR
>Mature_381_residues
SSSCIEEVSVPDDNWYRIANELLSRADITINGSAPSDIRVKNPDFFKRVLQEGSLGLGESYMDGWWECERLDIFFSKVLR
AGLENQLPHHVKDTLRILGARLINLQSKKRAWIVGKEHYDLGNDLFSRMLDPYMQYSCAYWKDADTLEAAQQAKLKLICE
KLQLQPGMRVLDIGCGWGGLSQYMATHYGVSVVGVTISAEQQKMAQTRCEGLDVSILLEDYRDLNDQFDRIVSVGMFEHV
GPKNYNTYFEVVDRNLKPDGLFLLHTIGSKKTDHNVDPWINKYIFPNGCLPSVRQIAEASESHFVMEDWHNFGADYDTTL
MAWHERFINAWPEIAGNYNERFKRMFSYYLNACAGAFRARDIQLWQVVFTRGVENGLRVPR

Specific function: Transfers a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge [H]

COG id: COG2230

COG function: function code M; Cyclopropane fatty acid synthase and related methyltransferases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CFA/CMAS family [H]

Homologues:

Organism=Escherichia coli, GI1787951, Length=382, Percent_Identity=90.3141361256545, Blast_Score=736, Evalue=0.0,
Organism=Caenorhabditis elegans, GI133904226, Length=385, Percent_Identity=28.8311688311688, Blast_Score=142, Evalue=4e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003333 [H]

Pfam domain/function: PF02353 CMAS [H]

EC number: =2.1.1.79 [H]

Molecular weight: Translated: 43937; Mature: 43806

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSCIEEVSVPDDNWYRIANELLSRADITINGSAPSDIRVKNPDFFKRVLQEGSLGLGE
CCCHHHHHCCCCCCHHHHHHHHHHHHCCEEECCCCCCCCEECCHHHHHHHHHCCCCCCCH
SYMDGWWECERLDIFFSKVLRAGLENQLPHHVKDTLRILGARLINLQSKKRAWIVGKEHY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCHHC
DLGNDLFSRMLDPYMQYSCAYWKDADTLEAAQQAKLKLICEKLQLQPGMRVLDIGCGWGG
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCH
LSQYMATHYGVSVVGVTISAEQQKMAQTRCEGLDVSILLEDYRDLNDQFDRIVSVGMFEH
HHHHHHHHCCEEEEEEEECHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
VGPKNYNTYFEVVDRNLKPDGLFLLHTIGSKKTDHNVDPWINKYIFPNGCLPSVRQIAEA
CCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHH
SESHFVMEDWHNFGADYDTTLMAWHERFINAWPEIAGNYNERFKRMFSYYLNACAGAFRA
HCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
RDIQLWQVVFTRGVENGLRVPR
HHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SSSCIEEVSVPDDNWYRIANELLSRADITINGSAPSDIRVKNPDFFKRVLQEGSLGLGE
CCHHHHHCCCCCCHHHHHHHHHHHHCCEEECCCCCCCCEECCHHHHHHHHHCCCCCCCH
SYMDGWWECERLDIFFSKVLRAGLENQLPHHVKDTLRILGARLINLQSKKRAWIVGKEHY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCHHC
DLGNDLFSRMLDPYMQYSCAYWKDADTLEAAQQAKLKLICEKLQLQPGMRVLDIGCGWGG
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCH
LSQYMATHYGVSVVGVTISAEQQKMAQTRCEGLDVSILLEDYRDLNDQFDRIVSVGMFEH
HHHHHHHHCCEEEEEEEECHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
VGPKNYNTYFEVVDRNLKPDGLFLLHTIGSKKTDHNVDPWINKYIFPNGCLPSVRQIAEA
CCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHH
SESHFVMEDWHNFGADYDTTLMAWHERFINAWPEIAGNYNERFKRMFSYYLNACAGAFRA
HCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
RDIQLWQVVFTRGVENGLRVPR
HHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]