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The map label for this gene is yfcC [H]

Identifier: 29141040

GI number: 29141040

Start: 596590

End: 598110

Strand: Reverse

Name: yfcC [H]

Synonym: t0525

Alternate gene names: 29141040

Gene position: 598110-596590 (Counterclockwise)

Preceding gene: 29141041

Following gene: 29141034

Centisome position: 12.48

GC content: 55.1

Gene sequence:

>1521_bases
ATGTCTGTCGTTACAGAATCAAAAACAGCCAGAAAATGGGCAATGCCCGATACGCTGGTCATCATCTTTTTTGTCGCCAT
TTTAACCAGTATCGCCACCTGGGTCGTCCCCGTTGGGATGTTTGATAGCCAGGAAGTGCAGTATCAGGTCGATGGTCAGA
CAAAAACCCGCAAAGTCGTCGACCCGCACTCTTTTCGCATTGTGACCAATGAGGCCGGAGAAGCGCAGTATCATCGCGTA
CAATTTTTCACTACCGGCGATGAAAGACCAGGGCTGATGAATTTTCCGTTTGAAGGGTTAACATCCGGATCGAAATTCGG
CACTGCCGTCGGCATCATTATGTTTATGTTGGTGATTGGCGGCGCATTCGGCATCGTGATGCGTACCGGCACCGTGGATA
ACGGCATTCTGGCGCTTATTCGCCACACGCGGGGCAACGAAGTCCTGTTTATTCCGGTGCTATTTGTCCTCTTTTCGTTA
GGGGGCGCCGTATTTGGCATGGGCGAAGAGGCGGTCGCCTTTGCAATTATCATAGCCCCGCTGATGGTCAGGCTGGGCTA
TGACAGCATTACCACCGTCCTGGTGACCTATATCGCCACCCAAATTGGCTTTGCCAGTTCGTGGATGAACCCGTTTTGCG
TAGTCGTCGCCCAGGGGATTGCCGGCGTGCCGGTACTTTCCGGCTCCGGGCTGCGTATTGTGGTCTGGATTGTCGCCACG
CTGATTGGGCTGGTTTTTACGCTGGTCTACGCCTCACGCGTGAAAAAGAATCCGCTGCTTTCCCGCGTCCACGAATCCGA
TCGCTATTTCCGCGAACAGCAGGATGAAGTCGTCCAGCGCCCTTTCACCTTCGGCGACTGGCTGGTACTGCTGGTTCTGA
CCGGCGTAATGATTTGGGTCGTCTGGGGCGTGATTGTCCACGCCTGGTTTATTCCGGAGATCGCCAGCCAGTTTTTCACC
ATGGGCGTGGTGATCGGCCTCATCGGCGTTATCTTCCGCCTCAACGGTATGACGGTCAACGTGATGGCGTCCTCATTCAC
CGAAGGGGCGAGGATGATGATCGCGCCCGCCTTGCTGGTGGGTTTTGCCAAAGGCATTCTGCTGCTGGTCGGCAACGGCG
AAGCCGGGGAACCCAGCGTGCTCAATACGTTGCTTAACAGTATCGCGCATGGCATCAGCGGGCTTAATAATGCTATCGCC
GCCTGGTTTATGCTGCTCTTCCAGGCGGTATTTAATTTCTTTGTCACGTCCGGTTCGGGCCAGGCGGCGTTAACCATGCC
ATTACTGGCGCCGCTCGGCGATCTGGTCGGCGTTAACCGTCAGGTGACTGTTCTTGCCTTCCAGTTTGGCGATGGCTTCA
GCCATATTATCTATCCGACATCAGCTTCGCTGATGGCCACGCTGGGCGTGTGCCGGGTCGATTTTCGCAACTGGCTTAAA
GTGGGGGCGTCGCTGCTGGGACTGCTGTTTATCATGTCCAGCGTGGTCGTGATTGGCGCGCAGATGATGGGATATCATTG
A

Upstream 100 bases:

>100_bases
TGCAAAGCGGAATTTTTTGCTTAACTGCGCTGCATCAATGAATAACTATTCCCTTCTTCTCATACTTGGCCTCTTTGCTT
TGCAACAGGGATAGTCCGTC

Downstream 100 bases:

>100_bases
TCCAAAATGCCGGATGAGCATCAGCGCCATCCGGCAATATCTCCATGATTAAAGCAGTGATTTCGCGGCTTCTACAATCG
CTGCGGCGGTGAGTCCGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 506; Mature: 505

Protein sequence:

>506_residues
MSVVTESKTARKWAMPDTLVIIFFVAILTSIATWVVPVGMFDSQEVQYQVDGQTKTRKVVDPHSFRIVTNEAGEAQYHRV
QFFTTGDERPGLMNFPFEGLTSGSKFGTAVGIIMFMLVIGGAFGIVMRTGTVDNGILALIRHTRGNEVLFIPVLFVLFSL
GGAVFGMGEEAVAFAIIIAPLMVRLGYDSITTVLVTYIATQIGFASSWMNPFCVVVAQGIAGVPVLSGSGLRIVVWIVAT
LIGLVFTLVYASRVKKNPLLSRVHESDRYFREQQDEVVQRPFTFGDWLVLLVLTGVMIWVVWGVIVHAWFIPEIASQFFT
MGVVIGLIGVIFRLNGMTVNVMASSFTEGARMMIAPALLVGFAKGILLLVGNGEAGEPSVLNTLLNSIAHGISGLNNAIA
AWFMLLFQAVFNFFVTSGSGQAALTMPLLAPLGDLVGVNRQVTVLAFQFGDGFSHIIYPTSASLMATLGVCRVDFRNWLK
VGASLLGLLFIMSSVVVIGAQMMGYH

Sequences:

>Translated_506_residues
MSVVTESKTARKWAMPDTLVIIFFVAILTSIATWVVPVGMFDSQEVQYQVDGQTKTRKVVDPHSFRIVTNEAGEAQYHRV
QFFTTGDERPGLMNFPFEGLTSGSKFGTAVGIIMFMLVIGGAFGIVMRTGTVDNGILALIRHTRGNEVLFIPVLFVLFSL
GGAVFGMGEEAVAFAIIIAPLMVRLGYDSITTVLVTYIATQIGFASSWMNPFCVVVAQGIAGVPVLSGSGLRIVVWIVAT
LIGLVFTLVYASRVKKNPLLSRVHESDRYFREQQDEVVQRPFTFGDWLVLLVLTGVMIWVVWGVIVHAWFIPEIASQFFT
MGVVIGLIGVIFRLNGMTVNVMASSFTEGARMMIAPALLVGFAKGILLLVGNGEAGEPSVLNTLLNSIAHGISGLNNAIA
AWFMLLFQAVFNFFVTSGSGQAALTMPLLAPLGDLVGVNRQVTVLAFQFGDGFSHIIYPTSASLMATLGVCRVDFRNWLK
VGASLLGLLFIMSSVVVIGAQMMGYH
>Mature_505_residues
SVVTESKTARKWAMPDTLVIIFFVAILTSIATWVVPVGMFDSQEVQYQVDGQTKTRKVVDPHSFRIVTNEAGEAQYHRVQ
FFTTGDERPGLMNFPFEGLTSGSKFGTAVGIIMFMLVIGGAFGIVMRTGTVDNGILALIRHTRGNEVLFIPVLFVLFSLG
GAVFGMGEEAVAFAIIIAPLMVRLGYDSITTVLVTYIATQIGFASSWMNPFCVVVAQGIAGVPVLSGSGLRIVVWIVATL
IGLVFTLVYASRVKKNPLLSRVHESDRYFREQQDEVVQRPFTFGDWLVLLVLTGVMIWVVWGVIVHAWFIPEIASQFFTM
GVVIGLIGVIFRLNGMTVNVMASSFTEGARMMIAPALLVGFAKGILLLVGNGEAGEPSVLNTLLNSIAHGISGLNNAIAA
WFMLLFQAVFNFFVTSGSGQAALTMPLLAPLGDLVGVNRQVTVLAFQFGDGFSHIIYPTSASLMATLGVCRVDFRNWLKV
GASLLGLLFIMSSVVVIGAQMMGYH

Specific function: Unknown

COG id: COG1288

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycgA [H]

Homologues:

Organism=Escherichia coli, GI87082082, Length=506, Percent_Identity=91.699604743083, Blast_Score=952, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018387
- InterPro:   IPR018385 [H]

Pfam domain/function: PF03606 DcuC [H]

EC number: NA

Molecular weight: Translated: 54806; Mature: 54674

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVVTESKTARKWAMPDTLVIIFFVAILTSIATWVVPVGMFDSQEVQYQVDGQTKTRKVV
CCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC
DPHSFRIVTNEAGEAQYHRVQFFTTGDERPGLMNFPFEGLTSGSKFGTAVGIIMFMLVIG
CCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
GAFGIVMRTGTVDNGILALIRHTRGNEVLFIPVLFVLFSLGGAVFGMGEEAVAFAIIIAP
CHHEEHEECCCCCCCHHHHHEECCCCCEEEHHHHHHHHHHCCHHCCCCHHHHHHHHHHHH
LMVRLGYDSITTVLVTYIATQIGFASSWMNPFCVVVAQGIAGVPVLSGSGLRIVVWIVAT
HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEECCCCCHHHHHHHHH
LIGLVFTLVYASRVKKNPLLSRVHESDRYFREQQDEVVQRPFTFGDWLVLLVLTGVMIWV
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
VWGVIVHAWFIPEIASQFFTMGVVIGLIGVIFRLNGMTVNVMASSFTEGARMMIAPALLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCHHHHHHHHHHH
GFAKGILLLVGNGEAGEPSVLNTLLNSIAHGISGLNNAIAAWFMLLFQAVFNFFVTSGSG
HHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
QAALTMPLLAPLGDLVGVNRQVTVLAFQFGDGFSHIIYPTSASLMATLGVCRVDFRNWLK
CEEEHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHH
VGASLLGLLFIMSSVVVIGAQMMGYH
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SVVTESKTARKWAMPDTLVIIFFVAILTSIATWVVPVGMFDSQEVQYQVDGQTKTRKVV
CCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC
DPHSFRIVTNEAGEAQYHRVQFFTTGDERPGLMNFPFEGLTSGSKFGTAVGIIMFMLVIG
CCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
GAFGIVMRTGTVDNGILALIRHTRGNEVLFIPVLFVLFSLGGAVFGMGEEAVAFAIIIAP
CHHEEHEECCCCCCCHHHHHEECCCCCEEEHHHHHHHHHHCCHHCCCCHHHHHHHHHHHH
LMVRLGYDSITTVLVTYIATQIGFASSWMNPFCVVVAQGIAGVPVLSGSGLRIVVWIVAT
HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEECCCCCHHHHHHHHH
LIGLVFTLVYASRVKKNPLLSRVHESDRYFREQQDEVVQRPFTFGDWLVLLVLTGVMIWV
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
VWGVIVHAWFIPEIASQFFTMGVVIGLIGVIFRLNGMTVNVMASSFTEGARMMIAPALLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCHHHHHHHHHHH
GFAKGILLLVGNGEAGEPSVLNTLLNSIAHGISGLNNAIAAWFMLLFQAVFNFFVTSGSG
HHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
QAALTMPLLAPLGDLVGVNRQVTVLAFQFGDGFSHIIYPTSASLMATLGVCRVDFRNWLK
CEEEHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHH
VGASLLGLLFIMSSVVVIGAQMMGYH
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 7883769 [H]