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The map label for this gene is yfhL [H]

Identifier: 29140815

GI number: 29140815

Start: 318812

End: 319072

Strand: Reverse

Name: yfhL [H]

Synonym: t0281

Alternate gene names: 29140815

Gene position: 319072-318812 (Counterclockwise)

Preceding gene: 29140816

Following gene: 29140803

Centisome position: 6.66

GC content: 47.13

Gene sequence:

>261_bases
ATGGCGCTGTTAATCACCAAAAAATGTATCAATTGCGATATGTGCGAGCCGGAGTGCCCGAATGAGGCGATTTCAATGGG
CGACAGCATTTATGAGATTAACAGCGACAAATGCACCGAGTGTGTAGGCCATTACGAAACGCCGACCTGTCAGAAAGTCT
GCCCGATCCCCAATACGATTTTGCAGGATCCCGCCCATGTCGAAACCGAAGAACAGTTGTGGGATAAGTTTGTTCTGATG
CATCACGCAGATAAATTGTAA

Upstream 100 bases:

>100_bases
TACACTGTAGATAACAAATCAGCGCCAGAAAAGAGCTGGCCCGAGTAGAAAATAGGCGTATAATGCCCGCCCGATTTGTG
TTGTTTCTGAGAATTTCCTG

Downstream 100 bases:

>100_bases
GCGGGTTAACGCACTTCCAACGCAACAATGCCTGATGGCGCTATGCTTATCAGGCCGGCAATATATCGGCCTGTAGGTCA
GATAACGTGTTTACGCCGCC

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 85

Protein sequence:

>86_residues
MALLITKKCINCDMCEPECPNEAISMGDSIYEINSDKCTECVGHYETPTCQKVCPIPNTILQDPAHVETEEQLWDKFVLM
HHADKL

Sequences:

>Translated_86_residues
MALLITKKCINCDMCEPECPNEAISMGDSIYEINSDKCTECVGHYETPTCQKVCPIPNTILQDPAHVETEEQLWDKFVLM
HHADKL
>Mature_85_residues
ALLITKKCINCDMCEPECPNEAISMGDSIYEINSDKCTECVGHYETPTCQKVCPIPNTILQDPAHVETEEQLWDKFVLMH
HADKL

Specific function: Unknown

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788914, Length=86, Percent_Identity=95.3488372093023, Blast_Score=172, Evalue=3e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9755; Mature: 9624

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
14.0 %Cys+Met (Translated Protein)
9.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
12.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLITKKCINCDMCEPECPNEAISMGDSIYEINSDKCTECVGHYETPTCQKVCPIPNTI
CCEEECCCCCCCCCCCCCCCHHHHHCCCCEEEECCCHHHHHHCCCCCCCCCCCCCCCHHH
LQDPAHVETEEQLWDKFVLMHHADKL
HCCCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ALLITKKCINCDMCEPECPNEAISMGDSIYEINSDKCTECVGHYETPTCQKVCPIPNTI
CEEECCCCCCCCCCCCCCCHHHHHCCCCEEEECCCHHHHHHCCCCCCCCCCCCCCCHHH
LQDPAHVETEEQLWDKFVLMHHADKL
HCCCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]