Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is yfiK [H]
Identifier: 29140800
GI number: 29140800
Start: 303405
End: 303992
Strand: Reverse
Name: yfiK [H]
Synonym: t0265
Alternate gene names: 29140800
Gene position: 303992-303405 (Counterclockwise)
Preceding gene: 29140801
Following gene: 29140798
Centisome position: 6.34
GC content: 51.7
Gene sequence:
>588_bases GTGACACCGATGCTTTTAAGCGCTTTCTGGACTTATACATTAATCACCGCCCTTACCCCCGGCCCAAACAATATTCTCGC GCTTAGCGCAGCAACTGCACATGGTTTTCGGCAGAGTATTCGTGTACTGGCAGGTATGAGTCTGGGATTTTTGGTCGTCA TGCTGCTGTGCGCCGGGATCGCGTTTTCCCTTGCGGTTATCGATCCGGCAATCATTCATTTGCTCAGTTGGGTAGGGGCT GCGTATATCCTGTGGCTGGCGTGGAAAATTGCCACCAGTCCAGCGGCGGATGAGAAGGTCAGACCAAAACCGGTTGGCTT TTGGGTAAGCTTTGGCCTGCAGTTTGTGAACGTCAAAATTATTCTGTACGGCATTACCGCTCTGTCTACATTTGTTTTAC CGCAAACGCAGGCGCTGAACTGGGTCATCGGCGTCAGTATATTGCTGGCATTGATCGGCACGTTCGGTAATGTGTGCTGG GCGCTGGCGGGACATCTGTTTCAGCGGGCGTTTCGCCATTATGGTCGCCAGTTAAATATCATTCTGGCGTTACTGCTGGT GTACTGCGCGGTGCGGATTTTTTACTGA
Upstream 100 bases:
>100_bases CCACCAACCTATCGAAAATCTCGAATTCAGAATTAAAAAACATTCATTTTTTTAAATATTTCATATCGGGTACTGTCTGC TAAAACAGAGGAGATGACAA
Downstream 100 bases:
>100_bases CACAAATAAAACAAAAGCGGAAAAGGCCCGGCCTCTTCCGCTTGTTATTACCGGATAAGCCTTACAGGCTTTCGGTAAAG GTACGAGCGATAACGTCGCG
Product: neutral amino-acid efflux protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MTPMLLSAFWTYTLITALTPGPNNILALSAATAHGFRQSIRVLAGMSLGFLVVMLLCAGIAFSLAVIDPAIIHLLSWVGA AYILWLAWKIATSPAADEKVRPKPVGFWVSFGLQFVNVKIILYGITALSTFVLPQTQALNWVIGVSILLALIGTFGNVCW ALAGHLFQRAFRHYGRQLNIILALLLVYCAVRIFY
Sequences:
>Translated_195_residues MTPMLLSAFWTYTLITALTPGPNNILALSAATAHGFRQSIRVLAGMSLGFLVVMLLCAGIAFSLAVIDPAIIHLLSWVGA AYILWLAWKIATSPAADEKVRPKPVGFWVSFGLQFVNVKIILYGITALSTFVLPQTQALNWVIGVSILLALIGTFGNVCW ALAGHLFQRAFRHYGRQLNIILALLLVYCAVRIFY >Mature_194_residues TPMLLSAFWTYTLITALTPGPNNILALSAATAHGFRQSIRVLAGMSLGFLVVMLLCAGIAFSLAVIDPAIIHLLSWVGAA YILWLAWKIATSPAADEKVRPKPVGFWVSFGLQFVNVKIILYGITALSTFVLPQTQALNWVIGVSILLALIGTFGNVCWA LAGHLFQRAFRHYGRQLNIILALLLVYCAVRIFY
Specific function: Exporter of O-acetylserine (OAS) and cysteine [H]
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the rht family [H]
Homologues:
Organism=Escherichia coli, GI1788932, Length=195, Percent_Identity=84.1025641025641, Blast_Score=343, Evalue=5e-96,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001123 [H]
Pfam domain/function: PF01810 LysE [H]
EC number: NA
Molecular weight: Translated: 21335; Mature: 21204
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPMLLSAFWTYTLITALTPGPNNILALSAATAHGFRQSIRVLAGMSLGFLVVMLLCAGI CCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH AFSLAVIDPAIIHLLSWVGAAYILWLAWKIATSPAADEKVRPKPVGFWVSFGLQFVNVKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH ILYGITALSTFVLPQTQALNWVIGVSILLALIGTFGNVCWALAGHLFQRAFRHYGRQLNI HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH ILALLLVYCAVRIFY HHHHHHHHHHHHHCC >Mature Secondary Structure TPMLLSAFWTYTLITALTPGPNNILALSAATAHGFRQSIRVLAGMSLGFLVVMLLCAGI CHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH AFSLAVIDPAIIHLLSWVGAAYILWLAWKIATSPAADEKVRPKPVGFWVSFGLQFVNVKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH ILYGITALSTFVLPQTQALNWVIGVSILLALIGTFGNVCWALAGHLFQRAFRHYGRQLNI HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH ILALLLVYCAVRIFY HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA