| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is srmB [H]
Identifier: 29140801
GI number: 29140801
Start: 305010
End: 306344
Strand: Reverse
Name: srmB [H]
Synonym: t0267
Alternate gene names: 29140801
Gene position: 306344-305010 (Counterclockwise)
Preceding gene: 29140803
Following gene: 29140800
Centisome position: 6.39
GC content: 54.83
Gene sequence:
>1335_bases ATGACTGTAACGACTTTTTCCGAACTTGAACTCGACGAAAGCCTGCTGGATGCCCTCCAGGATAAAGGTTTCACTCGCCC GACCGCCATTCAGGCTGCCGCCATTCCGCCTGCGCTCGATGGCCGTGATGTACTCGGTTCTGCGCCGACAGGCACCGGAA AAACGGCGGCATATCTGCTGCCGGCGTTGCAGCACCTGCTCGACTTTCCGCGTAAAAAATCGGGGCCGCCGCGCATTCTG ATCCTGACGCCAACCCGCGAACTGGCAATGCAGGTTGCCGATCACGCTCGTGAACTGGCTAAGCATACTCATCTGGATAT CGCCACGATTACCGGCGGCGTGGCCTATATGAACCATGCTGAAGTGTTTAGCGAAAACCAGGATATCGTGGTCGCCACGA CGGGCCGTCTGCTGCAATATATAAAAGAAGAGAATTTTGACTGCCGGGCGGTTGAAACACTGATCCTTGACGAAGCTGAC CGGATGCTCGACATGGGCTTCGCTCAGGACATTGAACATATCGCTGGTGAGACCCGCTGGCGTAAACAGACGATGCTGTT CTCCGCCACGCTGGAAGGCGATGCGATTAAAGATTTTGCCGAGCGCCTGCTGGAAGACCCGGTTGAGGTTTCCGCCAATC CGTCAACCCGCGAGCGCAAGAAAATTCACCAGTGGTACTACCGTGCCGACAATTTCGAACATAAAGTTGCGCTGTTGAAG CACCTGCTAAAACAAGACGATGCAACCCGTTCTATCGTGTTTGTACGTAAACGTGAACGCGTCCATGAACTGGCTGAAAC GCTGCGTCTGGCAGGGATCAACAATTGCTATCTTGAAGGCGAGATGGCGCAGATCAAACGTAACGAGGGTATTAAGCGTC TCACCGACGGTCGCGTTAACGTGCTGGTCGCGACCGACGTCGCGGCACGCGGGATTGATATTCCTGACGTCAGCCACGTC ATTAACTTCGACATGCCGCGCAGTGGCGATACCTATCTGCATCGCATTGGTCGTACAGGCCGTGCGGGTCGCAAAGGCAC TGCAATCTCGCTGGTTGAAGCCCACGACCATCTGTTGCTGCTGAAAATCGGTCGCTACATCGAAGAGCCGCTAAAAGCGC GCGTCATTGATGAGCTTCGCCCGACCACGCGTGCGCCCAGCGAAAAGCTGACCGGCAAACCGTCGAAAAAAGTGCTGGCG AAACGCGCCGAGAAGAAAAAAGAGAAAGAAAAAGAGAAGCCGCGCGTGAAGAAACGTTACCGCGATACAAAAAATATCGG TAAGCGCCGCAAGCCAAGCGGTACGAAAATGCAGGAGCAATCCAGCGAAGAGTGA
Upstream 100 bases:
>100_bases AGCGCCGAGTGAAAACAATACCTGAGAAGGGATATCCATACAAACAGATGAAGATTGCGGCCGTAACGTCTATAATCAGC GCCCCACACAGAGGTAGAAC
Downstream 100 bases:
>100_bases TGATAATGCCGGGTTCGTTAACCCGGCATTTTTTATCTTCCACGGTAAAACACGCCTCCATACACTGCATAAATATCTGC ATTGCCGGGCTGACCGCTTT
Product: ATP-dependent RNA helicase SrmB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MTVTTFSELELDESLLDALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQHLLDFPRKKSGPPRIL ILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHAEVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEAD RMLDMGFAQDIEHIAGETRWRKQTMLFSATLEGDAIKDFAERLLEDPVEVSANPSTRERKKIHQWYYRADNFEHKVALLK HLLKQDDATRSIVFVRKRERVHELAETLRLAGINNCYLEGEMAQIKRNEGIKRLTDGRVNVLVATDVAARGIDIPDVSHV INFDMPRSGDTYLHRIGRTGRAGRKGTAISLVEAHDHLLLLKIGRYIEEPLKARVIDELRPTTRAPSEKLTGKPSKKVLA KRAEKKKEKEKEKPRVKKRYRDTKNIGKRRKPSGTKMQEQSSEE
Sequences:
>Translated_444_residues MTVTTFSELELDESLLDALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQHLLDFPRKKSGPPRIL ILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHAEVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEAD RMLDMGFAQDIEHIAGETRWRKQTMLFSATLEGDAIKDFAERLLEDPVEVSANPSTRERKKIHQWYYRADNFEHKVALLK HLLKQDDATRSIVFVRKRERVHELAETLRLAGINNCYLEGEMAQIKRNEGIKRLTDGRVNVLVATDVAARGIDIPDVSHV INFDMPRSGDTYLHRIGRTGRAGRKGTAISLVEAHDHLLLLKIGRYIEEPLKARVIDELRPTTRAPSEKLTGKPSKKVLA KRAEKKKEKEKEKPRVKKRYRDTKNIGKRRKPSGTKMQEQSSEE >Mature_443_residues TVTTFSELELDESLLDALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQHLLDFPRKKSGPPRILI LTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHAEVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADR MLDMGFAQDIEHIAGETRWRKQTMLFSATLEGDAIKDFAERLLEDPVEVSANPSTRERKKIHQWYYRADNFEHKVALLKH LLKQDDATRSIVFVRKRERVHELAETLRLAGINNCYLEGEMAQIKRNEGIKRLTDGRVNVLVATDVAARGIDIPDVSHVI NFDMPRSGDTYLHRIGRTGRAGRKGTAISLVEAHDHLLLLKIGRYIEEPLKARVIDELRPTTRAPSEKLTGKPSKKVLAK RAEKKKEKEKEKPRVKKRYRDTKNIGKRRKPSGTKMQEQSSEE
Specific function: RNA-dependent ATPase activity. Acts in 50S ribosomal subunit biogenesis at low temperatures, acting before DeaD/CsdA. Suppressor of a mutant defective in 50S ribosomal subunit assembly. Probably interacts with 23S ribosomal RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI224593278, Length=375, Percent_Identity=38.4, Blast_Score=250, Evalue=1e-66, Organism=Homo sapiens, GI45446747, Length=367, Percent_Identity=37.6021798365123, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI45446743, Length=367, Percent_Identity=37.6021798365123, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI20149629, Length=445, Percent_Identity=33.9325842696629, Blast_Score=233, Evalue=2e-61, Organism=Homo sapiens, GI164419743, Length=391, Percent_Identity=35.5498721227622, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI51094101, Length=391, Percent_Identity=35.5498721227622, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI148613856, Length=356, Percent_Identity=36.2359550561798, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI38201710, Length=356, Percent_Identity=36.2359550561798, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI4758138, Length=362, Percent_Identity=35.6353591160221, Blast_Score=216, Evalue=4e-56, Organism=Homo sapiens, GI31542656, Length=381, Percent_Identity=36.2204724409449, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI262118318, Length=369, Percent_Identity=34.6883468834688, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI41327771, Length=404, Percent_Identity=31.9306930693069, Blast_Score=210, Evalue=2e-54, Organism=Homo sapiens, GI216548263, Length=369, Percent_Identity=34.6883468834688, Blast_Score=209, Evalue=5e-54, Organism=Homo sapiens, GI262231852, Length=369, Percent_Identity=34.6883468834688, Blast_Score=209, Evalue=5e-54, Organism=Homo sapiens, GI13518015, Length=369, Percent_Identity=34.6883468834688, Blast_Score=208, Evalue=7e-54, Organism=Homo sapiens, GI21071032, Length=372, Percent_Identity=34.6774193548387, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI7661920, Length=362, Percent_Identity=33.9779005524862, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI13514831, Length=360, Percent_Identity=36.1111111111111, Blast_Score=205, Evalue=7e-53, Organism=Homo sapiens, GI222352149, Length=367, Percent_Identity=35.149863760218, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI41327776, Length=445, Percent_Identity=31.685393258427, Blast_Score=203, Evalue=3e-52, Organism=Homo sapiens, GI41327773, Length=354, Percent_Identity=33.3333333333333, Blast_Score=202, Evalue=7e-52, Organism=Homo sapiens, GI188035877, Length=369, Percent_Identity=34.6883468834688, Blast_Score=202, Evalue=7e-52, Organism=Homo sapiens, GI164664518, Length=371, Percent_Identity=34.5013477088949, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI21040371, Length=351, Percent_Identity=33.9031339031339, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI55749865, Length=357, Percent_Identity=33.3333333333333, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI87196351, Length=369, Percent_Identity=32.520325203252, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI38327634, Length=348, Percent_Identity=35.0574712643678, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI38569505, Length=378, Percent_Identity=33.8624338624339, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI301171467, Length=369, Percent_Identity=32.520325203252, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI38569503, Length=378, Percent_Identity=33.8624338624339, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI169881239, Length=369, Percent_Identity=32.2493224932249, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI13514809, Length=369, Percent_Identity=32.2493224932249, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI301171475, Length=369, Percent_Identity=32.520325203252, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI4758112, Length=353, Percent_Identity=32.8611898016997, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI18375623, Length=353, Percent_Identity=32.8611898016997, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI13129006, Length=376, Percent_Identity=31.9148936170213, Blast_Score=186, Evalue=4e-47, Organism=Homo sapiens, GI9506931, Length=395, Percent_Identity=33.1645569620253, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI50659095, Length=377, Percent_Identity=31.5649867374005, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI6005743, Length=390, Percent_Identity=33.0769230769231, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI8922886, Length=390, Percent_Identity=32.8205128205128, Blast_Score=176, Evalue=5e-44, Organism=Homo sapiens, GI83700235, Length=366, Percent_Identity=33.3333333333333, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI4503529, Length=356, Percent_Identity=32.8651685393258, Blast_Score=172, Evalue=4e-43, Organism=Homo sapiens, GI62241022, Length=369, Percent_Identity=33.0623306233062, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI41327779, Length=359, Percent_Identity=33.7047353760446, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI164419732, Length=385, Percent_Identity=32.4675324675325, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI256223453, Length=356, Percent_Identity=30.3370786516854, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI62241024, Length=348, Percent_Identity=32.4712643678161, Blast_Score=153, Evalue=2e-37, Organism=Homo sapiens, GI17505907, Length=405, Percent_Identity=29.6296296296296, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI9966805, Length=345, Percent_Identity=29.2753623188406, Blast_Score=138, Evalue=9e-33, Organism=Homo sapiens, GI256773275, Length=380, Percent_Identity=31.8421052631579, Blast_Score=137, Evalue=3e-32, Organism=Homo sapiens, GI154759257, Length=401, Percent_Identity=28.1795511221945, Blast_Score=130, Evalue=4e-30, Organism=Homo sapiens, GI4826686, Length=333, Percent_Identity=29.1291291291291, Blast_Score=119, Evalue=5e-27, Organism=Homo sapiens, GI20336298, Length=219, Percent_Identity=34.703196347032, Blast_Score=108, Evalue=1e-23, Organism=Escherichia coli, GI1788930, Length=444, Percent_Identity=92.7927927927928, Blast_Score=767, Evalue=0.0, Organism=Escherichia coli, GI87082221, Length=406, Percent_Identity=40.8866995073892, Blast_Score=285, Evalue=6e-78, Organism=Escherichia coli, GI1787016, Length=373, Percent_Identity=39.9463806970509, Blast_Score=259, Evalue=2e-70, Organism=Escherichia coli, GI1790214, Length=379, Percent_Identity=38.7862796833773, Blast_Score=242, Evalue=3e-65, Organism=Escherichia coli, GI1787605, Length=352, Percent_Identity=37.5, Blast_Score=206, Evalue=3e-54, Organism=Caenorhabditis elegans, GI17552642, Length=379, Percent_Identity=38.2585751978892, Blast_Score=248, Evalue=6e-66, Organism=Caenorhabditis elegans, GI17555296, Length=353, Percent_Identity=38.8101983002833, Blast_Score=239, Evalue=2e-63, Organism=Caenorhabditis elegans, GI86570094, Length=355, Percent_Identity=37.7464788732394, Blast_Score=226, Evalue=1e-59, Organism=Caenorhabditis elegans, GI17510559, Length=401, Percent_Identity=34.1645885286783, Blast_Score=225, Evalue=3e-59, Organism=Caenorhabditis elegans, GI71999646, Length=369, Percent_Identity=36.3143631436314, Blast_Score=224, Evalue=8e-59, Organism=Caenorhabditis elegans, GI71999644, Length=358, Percent_Identity=37.1508379888268, Blast_Score=223, Evalue=1e-58, Organism=Caenorhabditis elegans, GI115533224, Length=358, Percent_Identity=36.3128491620112, Blast_Score=218, Evalue=7e-57, Organism=Caenorhabditis elegans, GI71995724, Length=364, Percent_Identity=35.1648351648352, Blast_Score=215, Evalue=4e-56, Organism=Caenorhabditis elegans, GI17507945, Length=397, Percent_Identity=35.7682619647355, Blast_Score=214, Evalue=6e-56, Organism=Caenorhabditis elegans, GI17507121, Length=365, Percent_Identity=34.7945205479452, Blast_Score=214, Evalue=6e-56, Organism=Caenorhabditis elegans, GI17507877, Length=382, Percent_Identity=35.3403141361257, Blast_Score=212, Evalue=4e-55, Organism=Caenorhabditis elegans, GI17510307, Length=366, Percent_Identity=34.9726775956284, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI71995514, Length=366, Percent_Identity=34.9726775956284, Blast_Score=208, Evalue=5e-54, Organism=Caenorhabditis elegans, GI17510309, Length=366, Percent_Identity=34.9726775956284, Blast_Score=208, Evalue=5e-54, Organism=Caenorhabditis elegans, GI17507879, Length=380, Percent_Identity=35, Blast_Score=206, Evalue=3e-53, Organism=Caenorhabditis elegans, GI17507881, Length=380, Percent_Identity=34.2105263157895, Blast_Score=205, Evalue=3e-53, Organism=Caenorhabditis elegans, GI71987143, Length=367, Percent_Identity=32.9700272479564, Blast_Score=205, Evalue=5e-53, Organism=Caenorhabditis elegans, GI17552114, Length=370, Percent_Identity=33.7837837837838, Blast_Score=202, Evalue=2e-52, Organism=Caenorhabditis elegans, GI32565321, Length=400, Percent_Identity=31.75, Blast_Score=200, Evalue=1e-51, Organism=Caenorhabditis elegans, GI17537549, Length=359, Percent_Identity=33.7047353760446, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI17509811, Length=363, Percent_Identity=34.9862258953168, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI71995718, Length=369, Percent_Identity=34.6883468834688, Blast_Score=194, Evalue=9e-50, Organism=Caenorhabditis elegans, GI17505370, Length=357, Percent_Identity=35.2941176470588, Blast_Score=189, Evalue=3e-48, Organism=Caenorhabditis elegans, GI115532548, Length=434, Percent_Identity=32.4884792626728, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI115532546, Length=393, Percent_Identity=33.3333333333333, Blast_Score=184, Evalue=1e-46, Organism=Caenorhabditis elegans, GI17507641, Length=397, Percent_Identity=31.9899244332494, Blast_Score=179, Evalue=3e-45, Organism=Caenorhabditis elegans, GI71982858, Length=353, Percent_Identity=32.0113314447592, Blast_Score=176, Evalue=2e-44, Organism=Caenorhabditis elegans, GI32564046, Length=387, Percent_Identity=32.0413436692506, Blast_Score=171, Evalue=7e-43, Organism=Caenorhabditis elegans, GI193206561, Length=351, Percent_Identity=31.6239316239316, Blast_Score=171, Evalue=8e-43, Organism=Caenorhabditis elegans, GI71990816, Length=379, Percent_Identity=31.9261213720317, Blast_Score=163, Evalue=1e-40, Organism=Caenorhabditis elegans, GI193208216, Length=395, Percent_Identity=32.4050632911392, Blast_Score=163, Evalue=2e-40, Organism=Caenorhabditis elegans, GI17536099, Length=389, Percent_Identity=30.0771208226221, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI25148203, Length=440, Percent_Identity=26.3636363636364, Blast_Score=160, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17536101, Length=389, Percent_Identity=30.0771208226221, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17536103, Length=393, Percent_Identity=30.0254452926209, Blast_Score=158, Evalue=6e-39, Organism=Caenorhabditis elegans, GI17556951, Length=421, Percent_Identity=30.8788598574822, Blast_Score=156, Evalue=3e-38, Organism=Caenorhabditis elegans, GI17508543, Length=385, Percent_Identity=28.5714285714286, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI17553716, Length=348, Percent_Identity=29.0229885057471, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI71997889, Length=395, Percent_Identity=26.8354430379747, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI25148205, Length=366, Percent_Identity=25.1366120218579, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI71982862, Length=218, Percent_Identity=30.7339449541284, Blast_Score=102, Evalue=5e-22, Organism=Caenorhabditis elegans, GI25148291, Length=388, Percent_Identity=25, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71987152, Length=89, Percent_Identity=46.0674157303371, Blast_Score=83, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6323021, Length=354, Percent_Identity=37.8531073446328, Blast_Score=248, Evalue=2e-66, Organism=Saccharomyces cerevisiae, GI6324217, Length=365, Percent_Identity=36.1643835616438, Blast_Score=231, Evalue=2e-61, Organism=Saccharomyces cerevisiae, GI6321360, Length=362, Percent_Identity=36.4640883977901, Blast_Score=218, Evalue=2e-57, Organism=Saccharomyces cerevisiae, GI6325138, Length=373, Percent_Identity=34.3163538873995, Blast_Score=215, Evalue=1e-56, Organism=Saccharomyces cerevisiae, GI6320041, Length=359, Percent_Identity=36.2116991643454, Blast_Score=213, Evalue=7e-56, Organism=Saccharomyces cerevisiae, GI6324778, Length=374, Percent_Identity=33.9572192513369, Blast_Score=212, Evalue=1e-55, Organism=Saccharomyces cerevisiae, GI6321856, Length=428, Percent_Identity=32.7102803738318, Blast_Score=211, Evalue=2e-55, Organism=Saccharomyces cerevisiae, GI6323947, Length=362, Percent_Identity=37.8453038674033, Blast_Score=209, Evalue=5e-55, Organism=Saccharomyces cerevisiae, GI6320173, Length=456, Percent_Identity=30.4824561403509, Blast_Score=208, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6320449, Length=384, Percent_Identity=33.59375, Blast_Score=199, Evalue=5e-52, Organism=Saccharomyces cerevisiae, GI6320224, Length=366, Percent_Identity=33.0601092896175, Blast_Score=198, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6322427, Length=371, Percent_Identity=33.6927223719677, Blast_Score=196, Evalue=5e-51, Organism=Saccharomyces cerevisiae, GI6322912, Length=355, Percent_Identity=35.4929577464789, Blast_Score=194, Evalue=3e-50, Organism=Saccharomyces cerevisiae, GI6322323, Length=355, Percent_Identity=35.4929577464789, Blast_Score=194, Evalue=3e-50, Organism=Saccharomyces cerevisiae, GI6320119, Length=367, Percent_Identity=33.7874659400545, Blast_Score=184, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6319618, Length=416, Percent_Identity=31.25, Blast_Score=182, Evalue=6e-47, Organism=Saccharomyces cerevisiae, GI6321963, Length=368, Percent_Identity=34.5108695652174, Blast_Score=180, Evalue=5e-46, Organism=Saccharomyces cerevisiae, GI6321267, Length=366, Percent_Identity=34.4262295081967, Blast_Score=175, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6319714, Length=449, Percent_Identity=29.6213808463252, Blast_Score=169, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6323306, Length=414, Percent_Identity=28.9855072463768, Blast_Score=168, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6324620, Length=381, Percent_Identity=30.9711286089239, Blast_Score=167, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6321111, Length=368, Percent_Identity=32.3369565217391, Blast_Score=161, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6320400, Length=378, Percent_Identity=31.4814814814815, Blast_Score=156, Evalue=6e-39, Organism=Saccharomyces cerevisiae, GI6324366, Length=358, Percent_Identity=25.4189944134078, Blast_Score=112, Evalue=1e-25, Organism=Saccharomyces cerevisiae, GI6322876, Length=424, Percent_Identity=25.7075471698113, Blast_Score=103, Evalue=4e-23, Organism=Drosophila melanogaster, GI21356161, Length=377, Percent_Identity=39.5225464190981, Blast_Score=265, Evalue=4e-71, Organism=Drosophila melanogaster, GI24662330, Length=368, Percent_Identity=38.0434782608696, Blast_Score=250, Evalue=2e-66, Organism=Drosophila melanogaster, GI28574962, Length=367, Percent_Identity=37.0572207084469, Blast_Score=236, Evalue=2e-62, Organism=Drosophila melanogaster, GI24584399, Length=351, Percent_Identity=36.4672364672365, Blast_Score=231, Evalue=8e-61, Organism=Drosophila melanogaster, GI18857967, Length=364, Percent_Identity=35.4395604395604, Blast_Score=223, Evalue=3e-58, Organism=Drosophila melanogaster, GI24644479, Length=366, Percent_Identity=34.4262295081967, Blast_Score=220, Evalue=1e-57, Organism=Drosophila melanogaster, GI24644483, Length=366, Percent_Identity=34.4262295081967, Blast_Score=220, Evalue=1e-57, Organism=Drosophila melanogaster, GI24644487, Length=366, Percent_Identity=34.4262295081967, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI45551833, Length=366, Percent_Identity=34.4262295081967, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI24644485, Length=366, Percent_Identity=34.4262295081967, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI281361218, Length=366, Percent_Identity=34.4262295081967, Blast_Score=219, Evalue=2e-57, Organism=Drosophila melanogaster, GI24644481, Length=366, Percent_Identity=34.4262295081967, Blast_Score=219, Evalue=2e-57, Organism=Drosophila melanogaster, GI24585582, Length=360, Percent_Identity=34.7222222222222, Blast_Score=218, Evalue=6e-57, Organism=Drosophila melanogaster, GI24642151, Length=354, Percent_Identity=35.0282485875706, Blast_Score=216, Evalue=2e-56, Organism=Drosophila melanogaster, GI24583281, Length=374, Percent_Identity=36.096256684492, Blast_Score=216, Evalue=3e-56, Organism=Drosophila melanogaster, GI24583279, Length=374, Percent_Identity=36.096256684492, Blast_Score=216, Evalue=4e-56, Organism=Drosophila melanogaster, GI21355075, Length=377, Percent_Identity=34.2175066312997, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI24645031, Length=365, Percent_Identity=34.7945205479452, Blast_Score=212, Evalue=4e-55, Organism=Drosophila melanogaster, GI17977678, Length=360, Percent_Identity=35, Blast_Score=211, Evalue=6e-55, Organism=Drosophila melanogaster, GI28575014, Length=369, Percent_Identity=33.3333333333333, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI24584994, Length=439, Percent_Identity=30.9794988610478, Blast_Score=205, Evalue=5e-53, Organism=Drosophila melanogaster, GI17985987, Length=373, Percent_Identity=32.9758713136729, Blast_Score=194, Evalue=7e-50, Organism=Drosophila melanogaster, GI281365720, Length=311, Percent_Identity=36.0128617363344, Blast_Score=192, Evalue=6e-49, Organism=Drosophila melanogaster, GI28571808, Length=359, Percent_Identity=33.7047353760446, Blast_Score=189, Evalue=3e-48, Organism=Drosophila melanogaster, GI28571809, Length=359, Percent_Identity=33.7047353760446, Blast_Score=189, Evalue=3e-48, Organism=Drosophila melanogaster, GI24642822, Length=368, Percent_Identity=32.8804347826087, Blast_Score=186, Evalue=4e-47, Organism=Drosophila melanogaster, GI17136814, Length=389, Percent_Identity=31.3624678663239, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI24666101, Length=365, Percent_Identity=33.6986301369863, Blast_Score=176, Evalue=2e-44, Organism=Drosophila melanogaster, GI24581954, Length=350, Percent_Identity=32.5714285714286, Blast_Score=175, Evalue=5e-44, Organism=Drosophila melanogaster, GI24581952, Length=350, Percent_Identity=32.5714285714286, Blast_Score=175, Evalue=5e-44, Organism=Drosophila melanogaster, GI24581956, Length=350, Percent_Identity=32.5714285714286, Blast_Score=175, Evalue=5e-44, Organism=Drosophila melanogaster, GI24582080, Length=362, Percent_Identity=32.5966850828729, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI24582078, Length=362, Percent_Identity=32.5966850828729, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI17136248, Length=362, Percent_Identity=32.5966850828729, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI24582075, Length=362, Percent_Identity=32.5966850828729, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI20130173, Length=454, Percent_Identity=28.8546255506608, Blast_Score=169, Evalue=3e-42, Organism=Drosophila melanogaster, GI24643725, Length=382, Percent_Identity=33.2460732984293, Blast_Score=169, Evalue=3e-42, Organism=Drosophila melanogaster, GI17647335, Length=362, Percent_Identity=31.4917127071823, Blast_Score=165, Evalue=6e-41, Organism=Drosophila melanogaster, GI21355559, Length=385, Percent_Identity=33.7662337662338, Blast_Score=161, Evalue=9e-40, Organism=Drosophila melanogaster, GI19920478, Length=366, Percent_Identity=31.4207650273224, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI17136666, Length=398, Percent_Identity=28.894472361809, Blast_Score=142, Evalue=4e-34, Organism=Drosophila melanogaster, GI24640164, Length=395, Percent_Identity=27.3417721518987, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI24668515, Length=336, Percent_Identity=29.1666666666667, Blast_Score=115, Evalue=5e-26, Organism=Drosophila melanogaster, GI18859659, Length=204, Percent_Identity=30.3921568627451, Blast_Score=89, Evalue=6e-18, Organism=Drosophila melanogaster, GI28571338, Length=204, Percent_Identity=30.3921568627451, Blast_Score=89, Evalue=7e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 50083; Mature: 49952
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVTTFSELELDESLLDALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLL CCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEHHCCCCCCCCCHHCCCCCCCCCCHHHHHH PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHA HHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHH EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW HHHCCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH RKQTMLFSATLEGDAIKDFAERLLEDPVEVSANPSTRERKKIHQWYYRADNFEHKVALLK HHHHEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH HLLKQDDATRSIVFVRKRERVHELAETLRLAGINNCYLEGEMAQIKRNEGIKRLTDGRVN HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHCCHHHHCCCCEE VLVATDVAARGIDIPDVSHVINFDMPRSGDTYLHRIGRTGRAGRKGTAISLVEAHDHLLL EEEEECHHHCCCCCCCHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCCHH LKIGRYIEEPLKARVIDELRPTTRAPSEKLTGKPSKKVLAKRAEKKKEKEKEKPRVKKRY HHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHH RDTKNIGKRRKPSGTKMQEQSSEE HHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TVTTFSELELDESLLDALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLL CCCCCHHHHHHHHHHHHHHHCCCCCCCCEEHHCCCCCCCCCHHCCCCCCCCCCHHHHHH PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHA HHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHH EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW HHHCCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH RKQTMLFSATLEGDAIKDFAERLLEDPVEVSANPSTRERKKIHQWYYRADNFEHKVALLK HHHHEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH HLLKQDDATRSIVFVRKRERVHELAETLRLAGINNCYLEGEMAQIKRNEGIKRLTDGRVN HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHCCHHHHCCCCEE VLVATDVAARGIDIPDVSHVINFDMPRSGDTYLHRIGRTGRAGRKGTAISLVEAHDHLLL EEEEECHHHCCCCCCCHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCCHH LKIGRYIEEPLKARVIDELRPTTRAPSEKLTGKPSKKVLAKRAEKKKEKEKEKPRVKKRY HHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHH RDTKNIGKRRKPSGTKMQEQSSEE HHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2461520; 9278503 [H]