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The map label for this gene is staE [H]

Identifier: 29140727

GI number: 29140727

Start: 212063

End: 212677

Strand: Reverse

Name: staE [H]

Synonym: t0186

Alternate gene names: 29140727

Gene position: 212677-212063 (Counterclockwise)

Preceding gene: 29140728

Following gene: 29140726

Centisome position: 4.44

GC content: 46.5

Gene sequence:

>615_bases
ATGATAATGAAAAAGCAAATATTGCGCGTCGTGATTTTTAGCTCGCTGATTGCCACGGGAGCTGGCATATCAACGATGAC
ATATGCCGATGGAACCAACAGTCTGGACCTGACCGTGAACGCCAATATCACTGCGGGTACGTGTTCTGCATCCGTGGTTG
AAGGTGATACCATTACCGATACTATCGCTTTTGGCAACGTTTACATTTCTGAAGTATATGCAAAAAGTAAAATAAAACTT
TTCAAGTTACGGTTCAGTGATTGTGTCGGTCTCAAAGATAAAAAAGCTAAGTTCAGACTAGCCCCAAATAATGTAGCATG
CCCGGGGAGCAGCGGCACTGATGGGCAATTCGCAAATGCCTCGACTTCAACAACAAAGGCAGCAATGGTCGCCATGGAAG
TATGGACGACAGAAACCCCTGGAGGCACTGGCGCGGTAAAACTTCACTGCTGGTCGAAACCAGAACAAACCGTGGATTTA
TCTGGTGCAAGTGTAACAACGCCTGTTGATTTTCCTTTAAGCGCTATGATGGTCGCTCAAAGCGGCGGTACGCTTCAAAA
TATGACAGCGGGAGATTTCTACTCGCCCACCACCTTCACCATCACTTACCAGTAA

Upstream 100 bases:

>100_bases
AAATGACGGTCGCGCTGCGTGAACTGACCGACGGCGCGGGTACCACAGGTGCTTTCAGCTCAACCGCTACGTTTAACTTC
ACTTATCAATAACAAGGACG

Downstream 100 bases:

>100_bases
TGGTGATACCAATGAGACGTTTGCGCGAACCCACGCTCGCCACGTTATTTTCAGGGCTGGCAACAGCCCTGTTTAGCGCG
ACGCTGTACGCCGATACCAA

Product: fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MIMKKQILRVVIFSSLIATGAGISTMTYADGTNSLDLTVNANITAGTCSASVVEGDTITDTIAFGNVYISEVYAKSKIKL
FKLRFSDCVGLKDKKAKFRLAPNNVACPGSSGTDGQFANASTSTTKAAMVAMEVWTTETPGGTGAVKLHCWSKPEQTVDL
SGASVTTPVDFPLSAMMVAQSGGTLQNMTAGDFYSPTTFTITYQ

Sequences:

>Translated_204_residues
MIMKKQILRVVIFSSLIATGAGISTMTYADGTNSLDLTVNANITAGTCSASVVEGDTITDTIAFGNVYISEVYAKSKIKL
FKLRFSDCVGLKDKKAKFRLAPNNVACPGSSGTDGQFANASTSTTKAAMVAMEVWTTETPGGTGAVKLHCWSKPEQTVDL
SGASVTTPVDFPLSAMMVAQSGGTLQNMTAGDFYSPTTFTITYQ
>Mature_204_residues
MIMKKQILRVVIFSSLIATGAGISTMTYADGTNSLDLTVNANITAGTCSASVVEGDTITDTIAFGNVYISEVYAKSKIKL
FKLRFSDCVGLKDKKAKFRLAPNNVACPGSSGTDGQFANASTSTTKAAMVAMEVWTTETPGGTGAVKLHCWSKPEQTVDL
SGASVTTPVDFPLSAMMVAQSGGTLQNMTAGDFYSPTTFTITYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786330, Length=204, Percent_Identity=39.7058823529412, Blast_Score=143, Evalue=9e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 21459; Mature: 21459

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMKKQILRVVIFSSLIATGAGISTMTYADGTNSLDLTVNANITAGTCSASVVEGDTITD
CCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCEEECCCCEEEECCCCEEE
TIAFGNVYISEVYAKSKIKLFKLRFSDCVGLKDKKAKFRLAPNNVACPGSSGTDGQFANA
EEEECCEEEEEHHCCCCEEEEEEEECHHCCCCCCCCEEEECCCCEECCCCCCCCCCCCCC
STSTTKAAMVAMEVWTTETPGGTGAVKLHCWSKPEQTVDLSGASVTTPVDFPLSAMMVAQ
CCCCHHEEEEEEEEEECCCCCCCCEEEEEECCCCCCEEEECCCEEECCCCCCCEEEEEEC
SGGTLQNMTAGDFYSPTTFTITYQ
CCCCCCCCCCCCCCCCEEEEEEEC
>Mature Secondary Structure
MIMKKQILRVVIFSSLIATGAGISTMTYADGTNSLDLTVNANITAGTCSASVVEGDTITD
CCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCEEECCCCEEEECCCCEEE
TIAFGNVYISEVYAKSKIKLFKLRFSDCVGLKDKKAKFRLAPNNVACPGSSGTDGQFANA
EEEECCEEEEEHHCCCCEEEEEEEECHHCCCCCCCCEEEECCCCEECCCCCCCCCCCCCC
STSTTKAAMVAMEVWTTETPGGTGAVKLHCWSKPEQTVDLSGASVTTPVDFPLSAMMVAQ
CCCCHHEEEEEEEEEECCCCCCCCEEEEEECCCCCCEEEECCCEEECCCCCCCEEEEEEC
SGGTLQNMTAGDFYSPTTFTITYQ
CCCCCCCCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]