Definition | Lactobacillus plantarum WCFS1, complete genome. |
---|---|
Accession | NC_004567 |
Length | 3,308,274 |
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The map label for this gene is tagB2 [H]
Identifier: 28378487
GI number: 28378487
Start: 1645367
End: 1647265
Strand: Direct
Name: tagB2 [H]
Synonym: lp_1819
Alternate gene names: 28378487
Gene position: 1645367-1647265 (Clockwise)
Preceding gene: 28378486
Following gene: 28378488
Centisome position: 49.73
GC content: 41.55
Gene sequence:
>1899_bases ATGATACAACGACTAAAACGAATCGCGCGTCGCATCGTATACGGACGGAATCAACCGCAATATACTCGTAATCGTGAACT GGTTGAGGACGCACAAACGACCAAGGAAGACGTTGATTTTCTAAATACATTGCGAATTGAGAAAGATGCCGAATCATTGA TCAAACGTCAAGTGACTAAGCTGGAATTCAACAGTTCTTACTTAGTGATTGAGGGAATGGCGTGGTTTGAAAAGTATCCC GAACAAGATACTGAACGAATTATTAAAAGCTTAATTTTGACTAGCAAGACGAATGAAGAATTAGAAATTCCGTTGATCAA CGTTCGTGGTCAAAACGCTGATTTTCCATATGCCGGGTATCATGGTGACATCAACTTTTCGACACTCAGTGAGGGTAAAC CGCTAACGCCAGGCACTTATGAAATCAAGATACAATTAAAACAGTATCTAGGTAATGGTTGGATTATCAGACGAACCTCC ATTGGTCAAGTGGTGGAAACACAGCAAGACTTAAATTATACGACTAAAATGACAAGCTATTCAGCGAAAAGCAATAAGTC ATACAGTCTAATTTTTCGGTATAATTTAGCCGCCCAAGCCTTAAAGGTCACTTCATATAAACTGAGTGATGTCAACCCGC TTGAAAATGAGTTTACTGAAGATGTCGGGTTAGATAGTGTAGCGATGCGTGCCATTAAACGCCGGGCGCTAAAACTCTGG TATCGGTGGTACTGCCTTCAACCGATTCATAAGAAACAAATTTCATTTGTTTCCGATAGTCGGGTGACAATCTCCGGTAA TTTCGAGTTTATCTACCAGGAATTAAAACGTCGCAATACTGATTTTAAGATTTCATTCTATTTGAAGCCAAGTATTAAAA CCAAAAAATCCTGGAAAGAGGTTCGAACGTTGGCTAAAGCGTTGGCTACTAGTCGCTATGTGATTTTAGATGACTTTTAC CCACTAGTTTACCCATTGCATATCCGGGAAAATGCGGATTTGATTCAGGTATGGCATGCGGTCGGTGCCTTTAAAACATT TGGTTACAGCCGGTTGGGGATGCCTGGTGGTCCTAAGGTTCAATCGTTAAATCATCGCAATTACACCAAAGCCTTGGTTT CTTCGCATAACATCGCGGATAAATACGCGGAAGGATTTGGAATTGCGCCGGATAAGATTCAGCCGCTAGGAATTCCGCGG ACGGATATCTTTTTCGATGAGCCCAAGAAACAGGCAATCCGGGAACGGCTCGCGCAAGATTTGCCATTCATCAAGGGCAA AAAAGTCATTCTCTTTGCCCCAACATTTCGTGGCAATGGTCAGCAATCAGCATACTATCCCTTTGAAATGTTGAATTTTA GAGCAATCTACGAAGCGTTACACGAAGATTACGTCTTTTTACTGAAGATTCATCCGTTTGTGCAAAACAAACCAACGTTA CCATATGAATATTCGGACTTCTATTACGATGTTTCTGATTATCGTGAGATCAACGATTTATTACTCGTTGCTGACCAATT AATCACTGACTACTCATCAGTTTGTTTCGAATACGCACTACTGAACCGGCCAATGATTTTCTTTGCGCCGGACTTAGCGG ATTACATGCAATCCCGGAGCTTTTACTTCAACTACTTTGATTTTATTCCTGGTAGTTTAGCGGAAAACACGGGTGAGTTG ATCAACCAGTTGCAACATCCACAAGTTGACCAAGCTAAATTGGACGGCTTTGTGAACTTCTTCTTTGATGATCTAGATGG TAAGTCGACAGCTCGTTTCGTGGATGCGCTTGAAAATGACTTCGAGGATCCGAACGCAGCTGAGTTAGAAAATAACGACG GTCTCGCCATTAGTGAAGATGGTAAGATTATCCCTGATTGGGGTAAAAAGGCTAAATAA
Upstream 100 bases:
>100_bases TGTACATGAATTAAAGCAAAAGACATTTCCACATCAAGATGGGCATAATACCGAACGGGTCGTTCAATTTGTTGAAAAAT TAGCAGGGGGAGAACATTAG
Downstream 100 bases:
>100_bases TATGTTAAGATAAAGCAGTCAGTCACATCATTAGCGCATTTACAGCGTTGATTGTGTGACCGACTGTTTTTGCTAGGAAA CTATAGGAGGAATTGATCAT
Product: teichoic acid biosynthesis protein
Products: NA
Alternate protein names: Polyribitol phosphate polymerase [H]
Number of amino acids: Translated: 632; Mature: 632
Protein sequence:
>632_residues MIQRLKRIARRIVYGRNQPQYTRNRELVEDAQTTKEDVDFLNTLRIEKDAESLIKRQVTKLEFNSSYLVIEGMAWFEKYP EQDTERIIKSLILTSKTNEELEIPLINVRGQNADFPYAGYHGDINFSTLSEGKPLTPGTYEIKIQLKQYLGNGWIIRRTS IGQVVETQQDLNYTTKMTSYSAKSNKSYSLIFRYNLAAQALKVTSYKLSDVNPLENEFTEDVGLDSVAMRAIKRRALKLW YRWYCLQPIHKKQISFVSDSRVTISGNFEFIYQELKRRNTDFKISFYLKPSIKTKKSWKEVRTLAKALATSRYVILDDFY PLVYPLHIRENADLIQVWHAVGAFKTFGYSRLGMPGGPKVQSLNHRNYTKALVSSHNIADKYAEGFGIAPDKIQPLGIPR TDIFFDEPKKQAIRERLAQDLPFIKGKKVILFAPTFRGNGQQSAYYPFEMLNFRAIYEALHEDYVFLLKIHPFVQNKPTL PYEYSDFYYDVSDYREINDLLLVADQLITDYSSVCFEYALLNRPMIFFAPDLADYMQSRSFYFNYFDFIPGSLAENTGEL INQLQHPQVDQAKLDGFVNFFFDDLDGKSTARFVDALENDFEDPNAAELENNDGLAISEDGKIIPDWGKKAK
Sequences:
>Translated_632_residues MIQRLKRIARRIVYGRNQPQYTRNRELVEDAQTTKEDVDFLNTLRIEKDAESLIKRQVTKLEFNSSYLVIEGMAWFEKYP EQDTERIIKSLILTSKTNEELEIPLINVRGQNADFPYAGYHGDINFSTLSEGKPLTPGTYEIKIQLKQYLGNGWIIRRTS IGQVVETQQDLNYTTKMTSYSAKSNKSYSLIFRYNLAAQALKVTSYKLSDVNPLENEFTEDVGLDSVAMRAIKRRALKLW YRWYCLQPIHKKQISFVSDSRVTISGNFEFIYQELKRRNTDFKISFYLKPSIKTKKSWKEVRTLAKALATSRYVILDDFY PLVYPLHIRENADLIQVWHAVGAFKTFGYSRLGMPGGPKVQSLNHRNYTKALVSSHNIADKYAEGFGIAPDKIQPLGIPR TDIFFDEPKKQAIRERLAQDLPFIKGKKVILFAPTFRGNGQQSAYYPFEMLNFRAIYEALHEDYVFLLKIHPFVQNKPTL PYEYSDFYYDVSDYREINDLLLVADQLITDYSSVCFEYALLNRPMIFFAPDLADYMQSRSFYFNYFDFIPGSLAENTGEL INQLQHPQVDQAKLDGFVNFFFDDLDGKSTARFVDALENDFEDPNAAELENNDGLAISEDGKIIPDWGKKAK >Mature_632_residues MIQRLKRIARRIVYGRNQPQYTRNRELVEDAQTTKEDVDFLNTLRIEKDAESLIKRQVTKLEFNSSYLVIEGMAWFEKYP EQDTERIIKSLILTSKTNEELEIPLINVRGQNADFPYAGYHGDINFSTLSEGKPLTPGTYEIKIQLKQYLGNGWIIRRTS IGQVVETQQDLNYTTKMTSYSAKSNKSYSLIFRYNLAAQALKVTSYKLSDVNPLENEFTEDVGLDSVAMRAIKRRALKLW YRWYCLQPIHKKQISFVSDSRVTISGNFEFIYQELKRRNTDFKISFYLKPSIKTKKSWKEVRTLAKALATSRYVILDDFY PLVYPLHIRENADLIQVWHAVGAFKTFGYSRLGMPGGPKVQSLNHRNYTKALVSSHNIADKYAEGFGIAPDKIQPLGIPR TDIFFDEPKKQAIRERLAQDLPFIKGKKVILFAPTFRGNGQQSAYYPFEMLNFRAIYEALHEDYVFLLKIHPFVQNKPTL PYEYSDFYYDVSDYREINDLLLVADQLITDYSSVCFEYALLNRPMIFFAPDLADYMQSRSFYFNYFDFIPGSLAENTGEL INQLQHPQVDQAKLDGFVNFFFDDLDGKSTARFVDALENDFEDPNAAELENNDGLAISEDGKIIPDWGKKAK
Specific function: Is responsible for the polymerization of the ribitol-P chain during poly(ribitol phosphate)teichoic acid synthesis (Potential) [H]
COG id: COG1887
COG function: function code M; Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-glycerol glycerophosphotransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007554 [H]
Pfam domain/function: PF04464 Glyphos_transf [H]
EC number: =2.7.8.14 [H]
Molecular weight: Translated: 73285; Mature: 73285
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQRLKRIARRIVYGRNQPQYTRNRELVEDAQTTKEDVDFLNTLRIEKDAESLIKRQVTK CHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LEFNSSYLVIEGMAWFEKYPEQDTERIIKSLILTSKTNEELEIPLINVRGQNADFPYAGY EEECCCEEEEECCHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCC HGDINFSTLSEGKPLTPGTYEIKIQLKQYLGNGWIIRRTSIGQVVETQQDLNYTTKMTSY CCCCCEEECCCCCCCCCCEEEEEEEEHHHHCCCEEEEECCCHHHHHHHHHCCCCCEEEEC SAKSNKSYSLIFRYNLAAQALKVTSYKLSDVNPLENEFTEDVGLDSVAMRAIKRRALKLW CCCCCCCEEEEEEECHHHHHHHHEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH YRWYCLQPIHKKQISFVSDSRVTISGNFEFIYQELKRRNTDFKISFYLKPSIKTKKSWKE HHHHHHCHHHHHHHHEECCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHH VRTLAKALATSRYVILDDFYPLVYPLHIRENADLIQVWHAVGAFKTFGYSRLGMPGGPKV HHHHHHHHHCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC QSLNHRNYTKALVSSHNIADKYAEGFGIAPDKIQPLGIPRTDIFFDEPKKQAIRERLAQD CCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LPFIKGKKVILFAPTFRGNGQQSAYYPFEMLNFRAIYEALHEDYVFLLKIHPFVQNKPTL CCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEHHHCCCCCC PYEYSDFYYDVSDYREINDLLLVADQLITDYSSVCFEYALLNRPMIFFAPDLADYMQSRS CEECCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHCCC FYFNYFDFIPGSLAENTGELINQLQHPQVDQAKLDGFVNFFFDDLDGKSTARFVDALEND EEEEHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC FEDPNAAELENNDGLAISEDGKIIPDWGKKAK CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC >Mature Secondary Structure MIQRLKRIARRIVYGRNQPQYTRNRELVEDAQTTKEDVDFLNTLRIEKDAESLIKRQVTK CHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LEFNSSYLVIEGMAWFEKYPEQDTERIIKSLILTSKTNEELEIPLINVRGQNADFPYAGY EEECCCEEEEECCHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCC HGDINFSTLSEGKPLTPGTYEIKIQLKQYLGNGWIIRRTSIGQVVETQQDLNYTTKMTSY CCCCCEEECCCCCCCCCCEEEEEEEEHHHHCCCEEEEECCCHHHHHHHHHCCCCCEEEEC SAKSNKSYSLIFRYNLAAQALKVTSYKLSDVNPLENEFTEDVGLDSVAMRAIKRRALKLW CCCCCCCEEEEEEECHHHHHHHHEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH YRWYCLQPIHKKQISFVSDSRVTISGNFEFIYQELKRRNTDFKISFYLKPSIKTKKSWKE HHHHHHCHHHHHHHHEECCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHH VRTLAKALATSRYVILDDFYPLVYPLHIRENADLIQVWHAVGAFKTFGYSRLGMPGGPKV HHHHHHHHHCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC QSLNHRNYTKALVSSHNIADKYAEGFGIAPDKIQPLGIPRTDIFFDEPKKQAIRERLAQD CCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LPFIKGKKVILFAPTFRGNGQQSAYYPFEMLNFRAIYEALHEDYVFLLKIHPFVQNKPTL CCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEHHHCCCCCC PYEYSDFYYDVSDYREINDLLLVADQLITDYSSVCFEYALLNRPMIFFAPDLADYMQSRS CEECCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHCCC FYFNYFDFIPGSLAENTGELINQLQHPQVDQAKLDGFVNFFFDDLDGKSTARFVDALEND EEEEHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC FEDPNAAELENNDGLAISEDGKIIPDWGKKAK CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11882717 [H]