Definition | Lactobacillus plantarum WCFS1, complete genome. |
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Accession | NC_004567 |
Length | 3,308,274 |
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The map label for this gene is tagB1 [H]
Identifier: 28378486
GI number: 28378486
Start: 1644245
End: 1645366
Strand: Direct
Name: tagB1 [H]
Synonym: lp_1818
Alternate gene names: 28378486
Gene position: 1644245-1645366 (Clockwise)
Preceding gene: 28378485
Following gene: 28378487
Centisome position: 49.7
GC content: 43.67
Gene sequence:
>1122_bases ATGGGACGTCTAAAGACGGTAAAGCTCGTGTTACTACACACGAGCTTTAATTTATTCTATCAATTTTTTTATAAAGTGTT TGGCCCGAAGAAGGGACGGATCACACTTGCCACGATGCGCAGCGGTCAATTAAACGACAATTTGGCAGCTCTTGAGCAGG GCCTAAAAACTGCCAACGTTAAACCGGTTACTGTGTTTTGCTATCATTATGACCGCACCCTGGCTGGAAAAGTGGGCTTC TTGCTCGCCTCCATTAAAGCGCTATACGTGATTGCCAGGGCTGACGTCTTTGTGATCGATGATTACTTTTTTCCACTTTA CGCAATTCACAAACATGATGATAATCAAGTGGTACAATTATGGCATGCCATTGGTTCATTGAAAAAGTTTGGCCTCAGCT TACCGAATGCTGATCAGAGCGTCATGAAGCCGCACACAAATTATGATTGGGTCTTGATCAATGCAAAGTCTGATCAGCCT GCTTATCTAGATGCCATGGCTATCAATCAAGATCACGTCATTGCCACTGGATCGCCAATGGTCGACTCGTTGCTTAATCG ACAACCACAACAACCGCGGCTCGCCGCCCGTCGTATTCTATACTCACCGACTTATCGGCAAGGTGTCCAGGGTAAGCAGC AAGTCATGGGATATGTCAACAACATGATTGCGGCCTGTCAGCAGCTGACCGGTCCATGGGAACTGTACATTTCGCTGCAT CCGTACTTAAAACTGTCAGCGATGACGCTACCATCCAACGTGCATATCTTCCAAGATGCTGAGCGGGTTAAGACGCTGAT GCCAACGATTGATTTATTTATAACCGATTATTCGTCATTATCATTGACGTTTAGTTATTTTGAACGACCAATCATTCTGT ATACGCCTGATTATGATGATTATATGCAAACATCCGGATTCTATGTCGATTACTATCAATATTTGCAAGCACCGCACTTC AGCAAAGCGGCGCGAGTTGTCGATTTTATTAATCAGGAAGTTGATCATATGGATCTATCTTATGTACATGAATTAAAGCA AAAGACATTTCCACATCAAGATGGGCATAATACCGAACGGGTCGTTCAATTTGTTGAAAAATTAGCAGGGGGAGAACATT AG
Upstream 100 bases:
>100_bases AAAATTTAGTTGGCTACGTTCAAAAAGTGAGTTCCATTCAAGACATTACCAACTTCTTTGATAGTGCACTTACTAATTAT TGGGGCAAGGAGGTGATGGA
Downstream 100 bases:
>100_bases ATGATACAACGACTAAAACGAATCGCGCGTCGCATCGTATACGGACGGAATCAACCGCAATATACTCGTAATCGTGAACT GGTTGAGGACGCACAAACGA
Product: teichoic acid biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MGRLKTVKLVLLHTSFNLFYQFFYKVFGPKKGRITLATMRSGQLNDNLAALEQGLKTANVKPVTVFCYHYDRTLAGKVGF LLASIKALYVIARADVFVIDDYFFPLYAIHKHDDNQVVQLWHAIGSLKKFGLSLPNADQSVMKPHTNYDWVLINAKSDQP AYLDAMAINQDHVIATGSPMVDSLLNRQPQQPRLAARRILYSPTYRQGVQGKQQVMGYVNNMIAACQQLTGPWELYISLH PYLKLSAMTLPSNVHIFQDAERVKTLMPTIDLFITDYSSLSLTFSYFERPIILYTPDYDDYMQTSGFYVDYYQYLQAPHF SKAARVVDFINQEVDHMDLSYVHELKQKTFPHQDGHNTERVVQFVEKLAGGEH
Sequences:
>Translated_373_residues MGRLKTVKLVLLHTSFNLFYQFFYKVFGPKKGRITLATMRSGQLNDNLAALEQGLKTANVKPVTVFCYHYDRTLAGKVGF LLASIKALYVIARADVFVIDDYFFPLYAIHKHDDNQVVQLWHAIGSLKKFGLSLPNADQSVMKPHTNYDWVLINAKSDQP AYLDAMAINQDHVIATGSPMVDSLLNRQPQQPRLAARRILYSPTYRQGVQGKQQVMGYVNNMIAACQQLTGPWELYISLH PYLKLSAMTLPSNVHIFQDAERVKTLMPTIDLFITDYSSLSLTFSYFERPIILYTPDYDDYMQTSGFYVDYYQYLQAPHF SKAARVVDFINQEVDHMDLSYVHELKQKTFPHQDGHNTERVVQFVEKLAGGEH >Mature_372_residues GRLKTVKLVLLHTSFNLFYQFFYKVFGPKKGRITLATMRSGQLNDNLAALEQGLKTANVKPVTVFCYHYDRTLAGKVGFL LASIKALYVIARADVFVIDDYFFPLYAIHKHDDNQVVQLWHAIGSLKKFGLSLPNADQSVMKPHTNYDWVLINAKSDQPA YLDAMAINQDHVIATGSPMVDSLLNRQPQQPRLAARRILYSPTYRQGVQGKQQVMGYVNNMIAACQQLTGPWELYISLHP YLKLSAMTLPSNVHIFQDAERVKTLMPTIDLFITDYSSLSLTFSYFERPIILYTPDYDDYMQTSGFYVDYYQYLQAPHFS KAARVVDFINQEVDHMDLSYVHELKQKTFPHQDGHNTERVVQFVEKLAGGEH
Specific function: Catalyzes the addition of a single ribitol-P residue onto the second glycerol-P of the linkage unit, as a primer for polymerisation by tarL (Potential) [H]
COG id: COG1887
COG function: function code M; Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-glycerol glycerophosphotransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007554 [H]
Pfam domain/function: PF04464 Glyphos_transf [H]
EC number: NA
Molecular weight: Translated: 42757; Mature: 42625
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRLKTVKLVLLHTSFNLFYQFFYKVFGPKKGRITLATMRSGQLNDNLAALEQGLKTANV CCCCEEEEEEEEEHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHCHHHCCC KPVTVFCYHYDRTLAGKVGFLLASIKALYVIARADVFVIDDYFFPLYAIHKHDDNQVVQL CEEEEEEEECCCHHHHHHHHHHHHHHHHHHHEECCEEEEECCCCEEEEEEECCCHHHHHH WHAIGSLKKFGLSLPNADQSVMKPHTNYDWVLINAKSDQPAYLDAMAINQDHVIATGSPM HHHHHHHHHHCCCCCCCCHHHHCCCCCCCEEEEECCCCCCCEEEEEEECCCCEEECCCHH VDSLLNRQPQQPRLAARRILYSPTYRQGVQGKQQVMGYVNNMIAACQQLTGPWELYISLH HHHHHCCCCCCHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC PYLKLSAMTLPSNVHIFQDAERVKTLMPTIDLFITDYSSLSLTFSYFERPIILYTPDYDD CCEEEEEEECCCCEEEECCHHHHHHHHHHHHHEEECCCCCEEEEHHHCCCEEEECCCCHH YMQTSGFYVDYYQYLQAPHFSKAARVVDFINQEVDHMDLSYVHELKQKTFPHQDGHNTER HHHCCCEEEHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHH VVQFVEKLAGGEH HHHHHHHHCCCCC >Mature Secondary Structure GRLKTVKLVLLHTSFNLFYQFFYKVFGPKKGRITLATMRSGQLNDNLAALEQGLKTANV CCCEEEEEEEEEHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHCHHHCCC KPVTVFCYHYDRTLAGKVGFLLASIKALYVIARADVFVIDDYFFPLYAIHKHDDNQVVQL CEEEEEEEECCCHHHHHHHHHHHHHHHHHHHEECCEEEEECCCCEEEEEEECCCHHHHHH WHAIGSLKKFGLSLPNADQSVMKPHTNYDWVLINAKSDQPAYLDAMAINQDHVIATGSPM HHHHHHHHHHCCCCCCCCHHHHCCCCCCCEEEEECCCCCCCEEEEEEECCCCEEECCCHH VDSLLNRQPQQPRLAARRILYSPTYRQGVQGKQQVMGYVNNMIAACQQLTGPWELYISLH HHHHHCCCCCCHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC PYLKLSAMTLPSNVHIFQDAERVKTLMPTIDLFITDYSSLSLTFSYFERPIILYTPDYDD CCEEEEEEECCCCEEEECCHHHHHHHHHHHHHEEECCCCCEEEEHHHCCCEEEECCCCHH YMQTSGFYVDYYQYLQAPHFSKAARVVDFINQEVDHMDLSYVHELKQKTFPHQDGHNTER HHHCCCEEEHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHH VVQFVEKLAGGEH HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11882717 [H]