Definition | Xylella fastidiosa Temecula1, complete genome. |
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Accession | NC_004556 |
Length | 2,519,802 |
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The map label for this gene is hisD [H]
Identifier: 28199153
GI number: 28199153
Start: 1476039
End: 1477334
Strand: Reverse
Name: hisD [H]
Synonym: PD1267
Alternate gene names: 28199153
Gene position: 1477334-1476039 (Counterclockwise)
Preceding gene: 28199154
Following gene: 28199152
Centisome position: 58.63
GC content: 60.57
Gene sequence:
>1296_bases ATGAAAATCATTGATTGGAACCAACTTGATACTGCGGCCCAGGCCAAGACACTGACCCGTCCCGCGCAGACCATCGCCAC ACAAACCCGTGAGGCCGTTACCGCCTTAATTGAACAAGTGCGTCGCGGCGGTGATACTGCCTTGCGTGACATCACCGCCC GCTTTGATGGTGTTGACCTGGCCACGTTTGAGGTTACTGCGGCCGAGCTGGCCGCTGCGGCCACGGCCGTTGCCCCAGAA CTACAGCACGCCATGCAGACAGCCGCAGCCCGGATCGAAGCCTTCCACCGTGCCGGAATGACTAACGACTATCGTGTGGA AACGGCGCCCGGTGTGGTGTGTGAACGGCTAGTACGTCCGATCGCCCGCGTGGGCTTGTACGTCCCTGCCGGCAGCGCCC CGTTATTTTCAACGGCCTTAATGCTGGGTGTCCCCGCACGGCTGGCCGGCTGCCGTGAAGTCGTCTTGTGTACCCCACCC TCTAAAGATGGCCGTGCCAATCCGGCGGTCCTGCTGGCCGCACGTCTTACCGGAGTCACACGCGTCTTCACACTGGGCGG CGCCCAGGCCATTGCGGCGATGGCTTACGGTACCGCAAGCGTTCCCACCTGTGACAAAGTGTTTGGCCCTGGAAATAGCT TTGTCACCGAAGCCAAACAACAGCTTGCACAAGCCGGCGTCGTCGCAATCGACATGCCGGCAGGCCCCTCGGAGGTCCTG GTGATCGCTGATGCCGCCGCCAATCCTGCGTTTATCGCTGCTGATCTCCTCTCCCAAGCAGAACACGGCCCGGATTCCCA AGTCCTCCTGTTATCTGACAGTGATGCACTGATGACAGCGGTACAGAATGCCCTTGCTCTCCAATTGCAGCAGCTATCCC GTGCCGAGATAGCGCGTCAGGCCTTAGCGCACTCCAGGTTCATTAAAGTGGCCACCCTGGAGACTGCCTTTGACATCAGC AACCGCTATGCGCCCGAACATTTGATTTTGGCATTGCGCCAACCGCGTGCCTGGCTGCATCGCGTCGCAGCCGCCGGTTC CGTCTTCCTTGGCGACTACACCCCCGAAGCCCTGGGTGACTATTGCAGCGGTACTAACCACGTCTTGCCCACCGGCGGTG CAGCCCGCGCCTATAGCGGCGTGAGCGTCTCCAGCTTCCAAAACATGATCAGCGTCCAAGCGGCCAGCCGCAGCGGTATT GCTGAAATTGGCGGCTGTGCATTGACCTTGGCGCGTGCCGAAGGATTGGATGCACACGCCAATGCTGTCGCCTTACGGAT GGGATCAGCCCCATGA
Upstream 100 bases:
>100_bases AGACTATGTGTCATGGCACCATCACCTGGCAGCGTTTGGAAGAACTGGAACGTGCTGGTGCTCAGGGCTTGATGGTATTG ACAGTAGAGCGATCCCTCGC
Downstream 100 bases:
>100_bases ACGCACAGACCCATACGGTCCTTGACCTGGTACGTCAAGAACTACGCAGCTTTGCTGGCTACTCCTCCGCGCGCAGTGTC GCTTTGACCGGTGACCTCTG
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MKIIDWNQLDTAAQAKTLTRPAQTIATQTREAVTALIEQVRRGGDTALRDITARFDGVDLATFEVTAAELAAAATAVAPE LQHAMQTAAARIEAFHRAGMTNDYRVETAPGVVCERLVRPIARVGLYVPAGSAPLFSTALMLGVPARLAGCREVVLCTPP SKDGRANPAVLLAARLTGVTRVFTLGGAQAIAAMAYGTASVPTCDKVFGPGNSFVTEAKQQLAQAGVVAIDMPAGPSEVL VIADAAANPAFIAADLLSQAEHGPDSQVLLLSDSDALMTAVQNALALQLQQLSRAEIARQALAHSRFIKVATLETAFDIS NRYAPEHLILALRQPRAWLHRVAAAGSVFLGDYTPEALGDYCSGTNHVLPTGGAARAYSGVSVSSFQNMISVQAASRSGI AEIGGCALTLARAEGLDAHANAVALRMGSAP
Sequences:
>Translated_431_residues MKIIDWNQLDTAAQAKTLTRPAQTIATQTREAVTALIEQVRRGGDTALRDITARFDGVDLATFEVTAAELAAAATAVAPE LQHAMQTAAARIEAFHRAGMTNDYRVETAPGVVCERLVRPIARVGLYVPAGSAPLFSTALMLGVPARLAGCREVVLCTPP SKDGRANPAVLLAARLTGVTRVFTLGGAQAIAAMAYGTASVPTCDKVFGPGNSFVTEAKQQLAQAGVVAIDMPAGPSEVL VIADAAANPAFIAADLLSQAEHGPDSQVLLLSDSDALMTAVQNALALQLQQLSRAEIARQALAHSRFIKVATLETAFDIS NRYAPEHLILALRQPRAWLHRVAAAGSVFLGDYTPEALGDYCSGTNHVLPTGGAARAYSGVSVSSFQNMISVQAASRSGI AEIGGCALTLARAEGLDAHANAVALRMGSAP >Mature_431_residues MKIIDWNQLDTAAQAKTLTRPAQTIATQTREAVTALIEQVRRGGDTALRDITARFDGVDLATFEVTAAELAAAATAVAPE LQHAMQTAAARIEAFHRAGMTNDYRVETAPGVVCERLVRPIARVGLYVPAGSAPLFSTALMLGVPARLAGCREVVLCTPP SKDGRANPAVLLAARLTGVTRVFTLGGAQAIAAMAYGTASVPTCDKVFGPGNSFVTEAKQQLAQAGVVAIDMPAGPSEVL VIADAAANPAFIAADLLSQAEHGPDSQVLLLSDSDALMTAVQNALALQLQQLSRAEIARQALAHSRFIKVATLETAFDIS NRYAPEHLILALRQPRAWLHRVAAAGSVFLGDYTPEALGDYCSGTNHVLPTGGAARAYSGVSVSSFQNMISVQAASRSGI AEIGGCALTLARAEGLDAHANAVALRMGSAP
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=428, Percent_Identity=50.7009345794392, Blast_Score=418, Evalue=1e-118, Organism=Saccharomyces cerevisiae, GI6319819, Length=425, Percent_Identity=46.5882352941176, Blast_Score=377, Evalue=1e-105,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 44840; Mature: 44840
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIIDWNQLDTAAQAKTLTRPAQTIATQTREAVTALIEQVRRGGDTALRDITARFDGVDL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEE ATFEVTAAELAAAATAVAPELQHAMQTAAARIEAFHRAGMTNDYRVETAPGVVCERLVRP EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHH IARVGLYVPAGSAPLFSTALMLGVPARLAGCREVVLCTPPSKDGRANPAVLLAARLTGVT HHHHCEECCCCCCHHHHHHHHHCCCHHHCCCCEEEEECCCCCCCCCCCCEEEHHHHHHHH RVFTLGGAQAIAAMAYGTASVPTCDKVFGPGNSFVTEAKQQLAQAGVVAIDMPAGPSEVL HHEECCCHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCEE VIADAAANPAFIAADLLSQAEHGPDSQVLLLSDSDALMTAVQNALALQLQQLSRAEIARQ EEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH ALAHSRFIKVATLETAFDISNRYAPEHLILALRQPRAWLHRVAAAGSVFLGDYTPEALGD HHHHHHEEEEEEHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCEEECCCCHHHHHH YCSGTNHVLPTGGAARAYSGVSVSSFQNMISVQAASRSGIAEIGGCALTLARAEGLDAHA HHCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCHHHCCHHEEEEHHCCCCCCC NAVALRMGSAP CEEEEEECCCC >Mature Secondary Structure MKIIDWNQLDTAAQAKTLTRPAQTIATQTREAVTALIEQVRRGGDTALRDITARFDGVDL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEE ATFEVTAAELAAAATAVAPELQHAMQTAAARIEAFHRAGMTNDYRVETAPGVVCERLVRP EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHH IARVGLYVPAGSAPLFSTALMLGVPARLAGCREVVLCTPPSKDGRANPAVLLAARLTGVT HHHHCEECCCCCCHHHHHHHHHCCCHHHCCCCEEEEECCCCCCCCCCCCEEEHHHHHHHH RVFTLGGAQAIAAMAYGTASVPTCDKVFGPGNSFVTEAKQQLAQAGVVAIDMPAGPSEVL HHEECCCHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCEE VIADAAANPAFIAADLLSQAEHGPDSQVLLLSDSDALMTAVQNALALQLQQLSRAEIARQ EEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH ALAHSRFIKVATLETAFDISNRYAPEHLILALRQPRAWLHRVAAAGSVFLGDYTPEALGD HHHHHHEEEEEEHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCEEECCCCHHHHHH YCSGTNHVLPTGGAARAYSGVSVSSFQNMISVQAASRSGIAEIGGCALTLARAEGLDAHA HHCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCHHHCCHHEEEEHHCCCCCCC NAVALRMGSAP CEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]