Definition | Xylella fastidiosa Temecula1, complete genome. |
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Accession | NC_004556 |
Length | 2,519,802 |
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The map label for this gene is hisC
Identifier: 28199152
GI number: 28199152
Start: 1474945
End: 1476042
Strand: Reverse
Name: hisC
Synonym: PD1266
Alternate gene names: 28199152
Gene position: 1476042-1474945 (Counterclockwise)
Preceding gene: 28199153
Following gene: 28199151
Centisome position: 58.58
GC content: 62.02
Gene sequence:
>1098_bases ATGAACGCACAGACCCATACGGTCCTTGACCTGGTACGTCAAGAACTACGCAGCTTTGCTGGCTACTCCTCCGCGCGCAG TGTCGCTTTGACCGGTGACCTCTGGCTCAATGCCAACGAATCGGCCTGGCCCAATCCCGCTGACTCCCACGCCACCATGC GACGTTATCCAGAACCGCAACCGCCCAAGTTGCGCCAGATGCTGGCGGCACTCTACGGCTGTCTTCCCGAGCAAGTATTG ATTGGTCGTGGCAGTGATGAAGGGATCGACTTACTGGTACGCGCCGTGTGCGAACCGAGACGTGATCCCGTCCTGGTCAC CCCCCCGGTGTTCGGCATGTATGCCGTTTCCGCACAGTTGCAGAACGCCCCATTGATCCAAGTCCCTTTAGTTGATGACG CCGCGGGCTTCCATGCCGACGTGCCTGCGATCATCACTGCCGCACAGACCTCCCGCGCCAAACTCGTGTTCTTGTGCTCA CCCTCCAATCCGGTCGGTGCCGCGATCCCGCTACAGCAGATTGAGACCATCTTGCAGACACTTGCCGGCACTGCTCTCGT CGTGGTGGATGAAGCTTACGGAGAATTCTCCGATGTCCCTTCCGTGGTGCCCCTGCTGGCCCGCTACCCACATCTTGTCG TGCTGCGTACCTTGTCCAAAGCCCATGCCCTGGCTGCTGTGCGTATCGGCAGCGTGATCGCCGATGCCCATTTAGTCGCG GTATTACGTCGCTGCCAAGCACCGTATCCCTTGCCCACCCCCTGCGTGAGCTTGGCTGAGCAGGGGCTGTCAGCCGCCGC GTTACACGTTACCGCACAGCGTGTGGCCGAGATCCGTGCTGAGCGTGAGCGCCTGCGTGCCGCCCTGGCCTGTCTGTCTG GCGTGCGCCGCGTCTATCCCTCCCAAGGGAACTTCCTCCTGGTGCGCTTTGATGATGCCGAGGCCGCGTTTCAGGCGCTG TACGCCGCTGGCGTCGTCGTGCGCGACCAGCGTGCCGCACCGCAGTTGCATGATGCCTTGCGGCTGACCGTGGGAACCCC CGAACAAAACACACGTCTCCTGGCCGTGTTGCGTGACATCCAGGCGGTGCCCGCATGA
Upstream 100 bases:
>100_bases GCGGTATTGCTGAAATTGGCGGCTGTGCATTGACCTTGGCGCGTGCCGAAGGATTGGATGCACACGCCAATGCTGTCGCC TTACGGATGGGATCAGCCCC
Downstream 100 bases:
>100_bases CCCCCATCGTGTTTATTGACCGTGACGGCACGCTCATTGAAGAGCCGCCTGATTTTCAGATTGATGCCTACGAAAAACTG CGCCTTGTCAACGGCGTGAT
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MNAQTHTVLDLVRQELRSFAGYSSARSVALTGDLWLNANESAWPNPADSHATMRRYPEPQPPKLRQMLAALYGCLPEQVL IGRGSDEGIDLLVRAVCEPRRDPVLVTPPVFGMYAVSAQLQNAPLIQVPLVDDAAGFHADVPAIITAAQTSRAKLVFLCS PSNPVGAAIPLQQIETILQTLAGTALVVVDEAYGEFSDVPSVVPLLARYPHLVVLRTLSKAHALAAVRIGSVIADAHLVA VLRRCQAPYPLPTPCVSLAEQGLSAAALHVTAQRVAEIRAERERLRAALACLSGVRRVYPSQGNFLLVRFDDAEAAFQAL YAAGVVVRDQRAAPQLHDALRLTVGTPEQNTRLLAVLRDIQAVPA
Sequences:
>Translated_365_residues MNAQTHTVLDLVRQELRSFAGYSSARSVALTGDLWLNANESAWPNPADSHATMRRYPEPQPPKLRQMLAALYGCLPEQVL IGRGSDEGIDLLVRAVCEPRRDPVLVTPPVFGMYAVSAQLQNAPLIQVPLVDDAAGFHADVPAIITAAQTSRAKLVFLCS PSNPVGAAIPLQQIETILQTLAGTALVVVDEAYGEFSDVPSVVPLLARYPHLVVLRTLSKAHALAAVRIGSVIADAHLVA VLRRCQAPYPLPTPCVSLAEQGLSAAALHVTAQRVAEIRAERERLRAALACLSGVRRVYPSQGNFLLVRFDDAEAAFQAL YAAGVVVRDQRAAPQLHDALRLTVGTPEQNTRLLAVLRDIQAVPA >Mature_365_residues MNAQTHTVLDLVRQELRSFAGYSSARSVALTGDLWLNANESAWPNPADSHATMRRYPEPQPPKLRQMLAALYGCLPEQVL IGRGSDEGIDLLVRAVCEPRRDPVLVTPPVFGMYAVSAQLQNAPLIQVPLVDDAAGFHADVPAIITAAQTSRAKLVFLCS PSNPVGAAIPLQQIETILQTLAGTALVVVDEAYGEFSDVPSVVPLLARYPHLVVLRTLSKAHALAAVRIGSVIADAHLVA VLRRCQAPYPLPTPCVSLAEQGLSAAALHVTAQRVAEIRAERERLRAALACLSGVRRVYPSQGNFLLVRFDDAEAAFQAL YAAGVVVRDQRAAPQLHDALRLTVGTPEQNTRLLAVLRDIQAVPA
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Homologues:
Organism=Escherichia coli, GI1788332, Length=357, Percent_Identity=42.8571428571429, Blast_Score=286, Evalue=1e-78, Organism=Saccharomyces cerevisiae, GI6322075, Length=373, Percent_Identity=33.5120643431635, Blast_Score=189, Evalue=8e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS8_XYLF2 (B2I5Y0)
Other databases:
- EMBL: CP001011 - RefSeq: YP_001830043.1 - ProteinModelPortal: B2I5Y0 - SMR: B2I5Y0 - GeneID: 6202228 - GenomeReviews: CP001011_GR - KEGG: xfn:XfasM23_1351 - HOGENOM: HBG646350 - OMA: IMRVIAP - ProtClustDB: PRK04781 - HAMAP: MF_01023 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10 - TIGRFAMs: TIGR01141
Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major
EC number: =2.6.1.9
Molecular weight: Translated: 39244; Mature: 39244
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAQTHTVLDLVRQELRSFAGYSSARSVALTGDLWLNANESAWPNPADSHATMRRYPEPQ CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHCCCCCC PPKLRQMLAALYGCLPEQVLIGRGSDEGIDLLVRAVCEPRRDPVLVTPPVFGMYAVSAQL CHHHHHHHHHHHCCCCCHHEEECCCCCHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHH QNAPLIQVPLVDDAAGFHADVPAIITAAQTSRAKLVFLCSPSNPVGAAIPLQQIETILQT CCCCEEEEECCCCCCCCCCCCCHHEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHH LAGTALVVVDEAYGEFSDVPSVVPLLARYPHLVVLRTLSKAHALAAVRIGSVIADAHLVA HCCCEEEEEECHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLRRCQAPYPLPTPCVSLAEQGLSAAALHVTAQRVAEIRAERERLRAALACLSGVRRVYP HHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SQGNFLLVRFDDAEAAFQALYAAGVVVRDQRAAPQLHDALRLTVGTPEQNTRLLAVLRDI CCCCEEEEEECCHHHHHHHHHHHCEEEECCCCCHHHHHHEEEEECCCCCCHHHHHHHHHH QAVPA HHCCC >Mature Secondary Structure MNAQTHTVLDLVRQELRSFAGYSSARSVALTGDLWLNANESAWPNPADSHATMRRYPEPQ CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHCCCCCC PPKLRQMLAALYGCLPEQVLIGRGSDEGIDLLVRAVCEPRRDPVLVTPPVFGMYAVSAQL CHHHHHHHHHHHCCCCCHHEEECCCCCHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHH QNAPLIQVPLVDDAAGFHADVPAIITAAQTSRAKLVFLCSPSNPVGAAIPLQQIETILQT CCCCEEEEECCCCCCCCCCCCCHHEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHH LAGTALVVVDEAYGEFSDVPSVVPLLARYPHLVVLRTLSKAHALAAVRIGSVIADAHLVA HCCCEEEEEECHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLRRCQAPYPLPTPCVSLAEQGLSAAALHVTAQRVAEIRAERERLRAALACLSGVRRVYP HHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SQGNFLLVRFDDAEAAFQALYAAGVVVRDQRAAPQLHDALRLTVGTPEQNTRLLAVLRDI CCCCEEEEEECCHHHHHHHHHHHCEEEECCCCCHHHHHHEEEEECCCCCCHHHHHHHHHH QAVPA HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA