Definition | Xylella fastidiosa Temecula1, complete genome. |
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Accession | NC_004556 |
Length | 2,519,802 |
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The map label for this gene is 28199011
Identifier: 28199011
GI number: 28199011
Start: 1314173
End: 1314559
Strand: Reverse
Name: 28199011
Synonym: PD1119
Alternate gene names: NA
Gene position: 1314559-1314173 (Counterclockwise)
Preceding gene: 28199012
Following gene: 28199010
Centisome position: 52.17
GC content: 55.81
Gene sequence:
>387_bases ATGACGCAGTTACCCTCTGCCGTGTGTTTTTCCGGCAAATCCCTTTCCATTATCGACCGTGACGGTGTTCCTCACCTAAG CGCACGCGATCTAGCCCACGCTTTGGGTTACAAAGACACCGTGAGCTTGACCACTGTACGCCGCTGCGGTACCGTCGCTA GTAAGGAGATCAAAAACTCCGGAAGTAGCGGTAACCGCACCCGAAACCCATGCGGTTTTTTTACGCCTGCACGTTTTTAC GTCGGGAGGGCGGCAGCCATACAACACCCGCAAGGGGAAAGCTGCCCGCCGTCTACTTCCGGTTTCTTAGCCTCCCGACA CCCACAGGTGCGGCGCCTAAGAACGTCTCCCCTGTGGTCATCCCATGAAGTAGGAGACGTTTTATGA
Upstream 100 bases:
>100_bases CTGCCCGCCGTCTAGCTACGGTTTCTTACCCTCCCGACATTCTCAGGGCGGCGCGTAAGAACGTCCCCCTGGGGCTTAAA CCTCAGCTAGGAGACGTTTT
Downstream 100 bases:
>100_bases CGCAGTTACCTGCTGCCGTGTGTTTTTCCGGCAAATCCCTTTCCATTATCGACCGTGATGGTGTTCCTCACCTAAGCGCA CGCGATCTAGCCCACGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MTQLPSAVCFSGKSLSIIDRDGVPHLSARDLAHALGYKDTVSLTTVRRCGTVASKEIKNSGSSGNRTRNPCGFFTPARFY VGRAAAIQHPQGESCPPSTSGFLASRHPQVRRLRTSPLWSSHEVGDVL
Sequences:
>Translated_128_residues MTQLPSAVCFSGKSLSIIDRDGVPHLSARDLAHALGYKDTVSLTTVRRCGTVASKEIKNSGSSGNRTRNPCGFFTPARFY VGRAAAIQHPQGESCPPSTSGFLASRHPQVRRLRTSPLWSSHEVGDVL >Mature_127_residues TQLPSAVCFSGKSLSIIDRDGVPHLSARDLAHALGYKDTVSLTTVRRCGTVASKEIKNSGSSGNRTRNPCGFFTPARFYV GRAAAIQHPQGESCPPSTSGFLASRHPQVRRLRTSPLWSSHEVGDVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13780; Mature: 13649
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQLPSAVCFSGKSLSIIDRDGVPHLSARDLAHALGYKDTVSLTTVRRCGTVASKEIKNS CCCCCCCEEECCCCEEEEECCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC GSSGNRTRNPCGFFTPARFYVGRAAAIQHPQGESCPPSTSGFLASRHPQVRRLRTSPLWS CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC SHEVGDVL CCCCCCCC >Mature Secondary Structure TQLPSAVCFSGKSLSIIDRDGVPHLSARDLAHALGYKDTVSLTTVRRCGTVASKEIKNS CCCCCCEEECCCCEEEEECCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC GSSGNRTRNPCGFFTPARFYVGRAAAIQHPQGESCPPSTSGFLASRHPQVRRLRTSPLWS CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC SHEVGDVL CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA