Click here to switch to the map view.

The map label for this gene is 28199012

Identifier: 28199012

GI number: 28199012

Start: 1314556

End: 1314972

Strand: Reverse

Name: 28199012

Synonym: PD1120

Alternate gene names: NA

Gene position: 1314972-1314556 (Counterclockwise)

Preceding gene: 28199014

Following gene: 28199011

Centisome position: 52.19

GC content: 54.92

Gene sequence:

>417_bases
GTGGTCATCTCACGAAACAGGAGACGTTTTATGACGCAGTTACCTGCTGCCGTGTGTTTTTCCGGCAAATCCCTTTCCAT
TATCGACCGTGATGGTGTTCCTCACCTAAGCGCACGCGATCTAGCCCACGCTTTGGGTTACAAAGACACCGTGAGCTTGA
CCACTGCCCATCGCTGCGGTACCGTCGCTGGTAAGGAGTGTAAGAACTCCGTAGCTAGCGGTACCCGCATCCGAAACCCA
TGCGGTTTTTTTACGCCTGCACGTTTTTACGTCGGGAGGGCGGCAGCCATACAACACCCTGTAAAGGGGAAAGCTGCCCG
CCGTCTAGCTACGGTTTCTTACCCTCCCGACATTCTCAGGGCGGCGCGTAAGAACGTCCCCCTGGGGCTTAAACCTCAGC
TAGGAGACGTTTTATGA

Upstream 100 bases:

>100_bases
CGGCAGCGATACAAGACCCTTTGGGGAAAGCTGCCCGCCGTCTGTTTCCGGTTTTTGACCTCCCGACACCTACGGGTGCG
GCGCGCAAAAACGTCTCCCC

Downstream 100 bases:

>100_bases
CGCAGTTACCCTCTGCCGTGTGTTTTTCCGGCAAATCCCTTTCCATTATCGACCGTGACGGTGTTCCTCACCTAAGCGCA
CGCGATCTAGCCCACGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MVISRNRRRFMTQLPAAVCFSGKSLSIIDRDGVPHLSARDLAHALGYKDTVSLTTAHRCGTVAGKECKNSVASGTRIRNP
CGFFTPARFYVGRAAAIQHPVKGKAARRLATVSYPPDILRAARKNVPLGLKPQLGDVL

Sequences:

>Translated_138_residues
MVISRNRRRFMTQLPAAVCFSGKSLSIIDRDGVPHLSARDLAHALGYKDTVSLTTAHRCGTVAGKECKNSVASGTRIRNP
CGFFTPARFYVGRAAAIQHPVKGKAARRLATVSYPPDILRAARKNVPLGLKPQLGDVL
>Mature_138_residues
MVISRNRRRFMTQLPAAVCFSGKSLSIIDRDGVPHLSARDLAHALGYKDTVSLTTAHRCGTVAGKECKNSVASGTRIRNP
CGFFTPARFYVGRAAAIQHPVKGKAARRLATVSYPPDILRAARKNVPLGLKPQLGDVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14926; Mature: 14926

Theoretical pI: Translated: 11.52; Mature: 11.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVISRNRRRFMTQLPAAVCFSGKSLSIIDRDGVPHLSARDLAHALGYKDTVSLTTAHRCG
CCCCCCHHHHHHHCCHHHHCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCEEEEHHHHCC
TVAGKECKNSVASGTRIRNPCGFFTPARFYVGRAAAIQHPVKGKAARRLATVSYPPDILR
CCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHEECCCCCHHHHH
AARKNVPLGLKPQLGDVL
HHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MVISRNRRRFMTQLPAAVCFSGKSLSIIDRDGVPHLSARDLAHALGYKDTVSLTTAHRCG
CCCCCCHHHHHHHCCHHHHCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCEEEEHHHHCC
TVAGKECKNSVASGTRIRNPCGFFTPARFYVGRAAAIQHPVKGKAARRLATVSYPPDILR
CCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHEECCCCCHHHHH
AARKNVPLGLKPQLGDVL
HHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA