| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62185321
Identifier: 62185321
GI number: 62185321
Start: 818981
End: 820501
Strand: Direct
Name: 62185321
Synonym: CAB708
Alternate gene names: NA
Gene position: 818981-820501 (Clockwise)
Preceding gene: 62185320
Following gene: 62185322
Centisome position: 71.57
GC content: 39.38
Gene sequence:
>1521_bases TTGACTATGTCTTCCTGGCTCGCACAATCTACAGAAATCCTCTTAAATCAACAGCCGTATATCCCAGATAGTCCTAAACA ATCTGAAGCCACTTCAAGTATAAAGTATTCTATTACTCAAGCTACAGAATCTTCTGGGCAATCCTTAACAAAAATTTTTA TCAACAAGCAATGTGAGAGATTGCTGACAAAAAATGGCGAGAAAGTTGTCACAAATAAACCCCTGACCCCCGCAAGTCCT AGAGAAAAAATCCTACAATTTGGAAGTTCTCTAGCCTCACAATTACCAAGAAAAGAACAGACTTCATCATCTTCTCCTTG GAATCTCTTTTCACGAACAAATTCTAAAGAATCGATGACAGCTCTTCGCAAAGATTTAATGATGCCGAAATTTGAAGAAG CAGCTACCGAGAAGAAAGTCTTTTCTGAAAAAACTCCCTACACGGAAACGTGTGTACAACATAAACAACAACCAAGAACT CAACATGACATAGAAAGATCTAAGACGTTCTGTGAATCTACAGAAGATACAGAACATACACTACTATCCGAGGAGAAATT TCTTTCTTCTCGGGATGCTGATTTGCGTAATAAAGAAGAACATCGACTAACTCTAAAATCGCCTCTAGGAAAATATAGCA AAGGATTATCACAAGATGAGCATCCAGGAAAACAGCACCCTCAAAAATGTGTCTTTAAAAAATTCCAAAAAAATAAAAAA ACGCGAGCAGCTTCTGTTGTTCCTATTATTCATCCTCCTTCTGTTGGTGTATTTACCTTAAGTTACCTACTCACAAAACA AGGGATACTTTCCGATTTTTCAGCTTATGCATCCTATAAAGATTGTGTAGAAACTACGCAAAAAGAACTTGATGCAACAC ATGCAGAGCGTATTGAACAAATCCAAAAGTCTATTGAGAAGGAACGGCAAGCGCAACGCTGGGGCTCTTTAGCCACTCTT ATGGAATGGATTGTGCCCTGGACCAACTTGGGCATCTCTACTTTTGCTGTAATCATGGGGGGAGGGATTTACTATTGGGT AGCTGTGCTATCCGCTCTTATTATACTCACACTCACCTTATTGAATACTATAAACGGTTGGGACGCTATTGAAAAATTCC TCCCAGGGAAAGACAGGCAAACAAAACAAAAAATACTAAGAATTGTACAAATTGTTCTTTATGCCATCGCCACTATATTA TCCTTTACCGTTATAAATATGGAAAATCTTGGGCTATCTCCACTTATAGAAGGAGCCCTGCATGGGTTAATCCCCGCTTT AGAAGGGGCTGTAAGCCTACTACGCGGGGCTACGCTGTGGATACGCTCAAAATTATTCAAAATGAAGTCCCGCTACATGC TTCTCGAAACAAAAATCGAACTTCTTAGCTTAGAAAGGGATGATTACATCGCGCGTACTCAAGAAATCTTGGAAAGTCTT CATGACTCTTTCGAAAATCTCGTGCGCATGCTACAGTTGTGCAGAGAAATCGACAGAACGTTTCTGGAATCTCTAAAGTA A
Upstream 100 bases:
>100_bases ACTTGCTTGGGAACGCGCCAAACATCATAGCGCTTACCAAGAACTAAAAGCAGAAATCTTGGATATAAAAAACCATGCAT AATCCCATAACTATGGGGAA
Downstream 100 bases:
>100_bases ATTTTTTGTAAGGAATCTTATGACAGCATCTTGTGCAGTAACAGCCGGTTCAACTGCAGAAAGTACGGAGATCGATTTAC TAGCTACAGCATCAGAAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 506; Mature: 505
Protein sequence:
>506_residues MTMSSWLAQSTEILLNQQPYIPDSPKQSEATSSIKYSITQATESSGQSLTKIFINKQCERLLTKNGEKVVTNKPLTPASP REKILQFGSSLASQLPRKEQTSSSSPWNLFSRTNSKESMTALRKDLMMPKFEEAATEKKVFSEKTPYTETCVQHKQQPRT QHDIERSKTFCESTEDTEHTLLSEEKFLSSRDADLRNKEEHRLTLKSPLGKYSKGLSQDEHPGKQHPQKCVFKKFQKNKK TRAASVVPIIHPPSVGVFTLSYLLTKQGILSDFSAYASYKDCVETTQKELDATHAERIEQIQKSIEKERQAQRWGSLATL MEWIVPWTNLGISTFAVIMGGGIYYWVAVLSALIILTLTLLNTINGWDAIEKFLPGKDRQTKQKILRIVQIVLYAIATIL SFTVINMENLGLSPLIEGALHGLIPALEGAVSLLRGATLWIRSKLFKMKSRYMLLETKIELLSLERDDYIARTQEILESL HDSFENLVRMLQLCREIDRTFLESLK
Sequences:
>Translated_506_residues MTMSSWLAQSTEILLNQQPYIPDSPKQSEATSSIKYSITQATESSGQSLTKIFINKQCERLLTKNGEKVVTNKPLTPASP REKILQFGSSLASQLPRKEQTSSSSPWNLFSRTNSKESMTALRKDLMMPKFEEAATEKKVFSEKTPYTETCVQHKQQPRT QHDIERSKTFCESTEDTEHTLLSEEKFLSSRDADLRNKEEHRLTLKSPLGKYSKGLSQDEHPGKQHPQKCVFKKFQKNKK TRAASVVPIIHPPSVGVFTLSYLLTKQGILSDFSAYASYKDCVETTQKELDATHAERIEQIQKSIEKERQAQRWGSLATL MEWIVPWTNLGISTFAVIMGGGIYYWVAVLSALIILTLTLLNTINGWDAIEKFLPGKDRQTKQKILRIVQIVLYAIATIL SFTVINMENLGLSPLIEGALHGLIPALEGAVSLLRGATLWIRSKLFKMKSRYMLLETKIELLSLERDDYIARTQEILESL HDSFENLVRMLQLCREIDRTFLESLK >Mature_505_residues TMSSWLAQSTEILLNQQPYIPDSPKQSEATSSIKYSITQATESSGQSLTKIFINKQCERLLTKNGEKVVTNKPLTPASPR EKILQFGSSLASQLPRKEQTSSSSPWNLFSRTNSKESMTALRKDLMMPKFEEAATEKKVFSEKTPYTETCVQHKQQPRTQ HDIERSKTFCESTEDTEHTLLSEEKFLSSRDADLRNKEEHRLTLKSPLGKYSKGLSQDEHPGKQHPQKCVFKKFQKNKKT RAASVVPIIHPPSVGVFTLSYLLTKQGILSDFSAYASYKDCVETTQKELDATHAERIEQIQKSIEKERQAQRWGSLATLM EWIVPWTNLGISTFAVIMGGGIYYWVAVLSALIILTLTLLNTINGWDAIEKFLPGKDRQTKQKILRIVQIVLYAIATILS FTVINMENLGLSPLIEGALHGLIPALEGAVSLLRGATLWIRSKLFKMKSRYMLLETKIELLSLERDDYIARTQEILESLH DSFENLVRMLQLCREIDRTFLESLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57527; Mature: 57396
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMSSWLAQSTEILLNQQPYIPDSPKQSEATSSIKYSITQATESSGQSLTKIFINKQCER CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LLTKNGEKVVTNKPLTPASPREKILQFGSSLASQLPRKEQTSSSSPWNLFSRTNSKESMT HHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHCCCCHHHHH ALRKDLMMPKFEEAATEKKVFSEKTPYTETCVQHKQQPRTQHDIERSKTFCESTEDTEHT HHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHH LLSEEKFLSSRDADLRNKEEHRLTLKSPLGKYSKGLSQDEHPGKQHPQKCVFKKFQKNKK HHHHHHHHHHCCCCCCCCHHHHEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH TRAASVVPIIHPPSVGVFTLSYLLTKQGILSDFSAYASYKDCVETTQKELDATHAERIEQ HHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQKSIEKERQAQRWGSLATLMEWIVPWTNLGISTFAVIMGGGIYYWVAVLSALIILTLTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LNTINGWDAIEKFLPGKDRQTKQKILRIVQIVLYAIATILSFTVINMENLGLSPLIEGAL HHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH HGLIPALEGAVSLLRGATLWIRSKLFKMKSRYMLLETKIELLSLERDDYIARTQEILESL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH HDSFENLVRMLQLCREIDRTFLESLK HHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TMSSWLAQSTEILLNQQPYIPDSPKQSEATSSIKYSITQATESSGQSLTKIFINKQCER CHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LLTKNGEKVVTNKPLTPASPREKILQFGSSLASQLPRKEQTSSSSPWNLFSRTNSKESMT HHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHCCCCHHHHH ALRKDLMMPKFEEAATEKKVFSEKTPYTETCVQHKQQPRTQHDIERSKTFCESTEDTEHT HHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHH LLSEEKFLSSRDADLRNKEEHRLTLKSPLGKYSKGLSQDEHPGKQHPQKCVFKKFQKNKK HHHHHHHHHHCCCCCCCCHHHHEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH TRAASVVPIIHPPSVGVFTLSYLLTKQGILSDFSAYASYKDCVETTQKELDATHAERIEQ HHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQKSIEKERQAQRWGSLATLMEWIVPWTNLGISTFAVIMGGGIYYWVAVLSALIILTLTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LNTINGWDAIEKFLPGKDRQTKQKILRIVQIVLYAIATILSFTVINMENLGLSPLIEGAL HHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH HGLIPALEGAVSLLRGATLWIRSKLFKMKSRYMLLETKIELLSLERDDYIARTQEILESL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH HDSFENLVRMLQLCREIDRTFLESLK HHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA