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The map label for this gene is 62185320

Identifier: 62185320

GI number: 62185320

Start: 818444

End: 818962

Strand: Direct

Name: 62185320

Synonym: CAB707

Alternate gene names: NA

Gene position: 818444-818962 (Clockwise)

Preceding gene: 62185319

Following gene: 62185321

Centisome position: 71.52

GC content: 36.42

Gene sequence:

>519_bases
ATGTCATATTTAGCGTATTTATTAGAAAAAGTAGCAGCCTCTAGCAAAGAAGATTTTCCTTTTCCTGATGATTTGGAAAG
TTATCTTGCAGGATATTTCCCAAATCAAGATCTTCCTTTGGACACGTACCAAAAGCTATTCAAAATCTCTTCAGAAGAGC
TAGAACGTGTGTATAAAGAAGGCTATAACGCCTATTTAAATAGAGAATATCAAGTAAGTAGTGAAACTTTCCGTTGGCTA
GTATTCTTTAATCCTTTCGTCTCGAAGTTTTGGTTTTCTTTAGGAGCTTCTTTACATGTGAGCAAGCTCTATCCCCAAGC
TTTACATGCCTATGCAGTCACGGCATTATTAAGAGATAAAGATCCTTATCCTCATTACTATGCTTACATTTGCTATACAC
TCATGGACGAACATGAGAACGCAAATAAAGCTTTAGAACTTGCTTGGGAACGCGCCAAACATCATAGCGCTTACCAAGAA
CTAAAAGCAGAAATCTTGGATATAAAAAACCATGCATAA

Upstream 100 bases:

>100_bases
GGCATCTTCAGGAAGTCTCGCAATGTCACCAAGCACGCTCCAATGTATTGAAACTTCTCAAAGAGCTCATGGATACCTTT
ATTTACAACTTGCGTCCGTA

Downstream 100 bases:

>100_bases
TCCCATAACTATGGGGAATTGACTATGTCTTCCTGGCTCGCACAATCTACAGAAATCCTCTTAAATCAACAGCCGTATAT
CCCAGATAGTCCTAAACAAT

Product: low calcium response locus protein

Products: NA

Alternate protein names: Type III Secretion Chaperone; TPR Repeat-Containing Protein; Type III Secretion Chaperone Low Calcium Response Protein H; Chaperone SycD

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MSYLAYLLEKVAASSKEDFPFPDDLESYLAGYFPNQDLPLDTYQKLFKISSEELERVYKEGYNAYLNREYQVSSETFRWL
VFFNPFVSKFWFSLGASLHVSKLYPQALHAYAVTALLRDKDPYPHYYAYICYTLMDEHENANKALELAWERAKHHSAYQE
LKAEILDIKNHA

Sequences:

>Translated_172_residues
MSYLAYLLEKVAASSKEDFPFPDDLESYLAGYFPNQDLPLDTYQKLFKISSEELERVYKEGYNAYLNREYQVSSETFRWL
VFFNPFVSKFWFSLGASLHVSKLYPQALHAYAVTALLRDKDPYPHYYAYICYTLMDEHENANKALELAWERAKHHSAYQE
LKAEILDIKNHA
>Mature_171_residues
SYLAYLLEKVAASSKEDFPFPDDLESYLAGYFPNQDLPLDTYQKLFKISSEELERVYKEGYNAYLNREYQVSSETFRWLV
FFNPFVSKFWFSLGASLHVSKLYPQALHAYAVTALLRDKDPYPHYYAYICYTLMDEHENANKALELAWERAKHHSAYQEL
KAEILDIKNHA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20279; Mature: 20148

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYLAYLLEKVAASSKEDFPFPDDLESYLAGYFPNQDLPLDTYQKLFKISSEELERVYKE
CHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHH
GYNAYLNREYQVSSETFRWLVFFNPFVSKFWFSLGASLHVSKLYPQALHAYAVTALLRDK
HHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
DPYPHYYAYICYTLMDEHENANKALELAWERAKHHSAYQELKAEILDIKNHA
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SYLAYLLEKVAASSKEDFPFPDDLESYLAGYFPNQDLPLDTYQKLFKISSEELERVYKE
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHH
GYNAYLNREYQVSSETFRWLVFFNPFVSKFWFSLGASLHVSKLYPQALHAYAVTALLRDK
HHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
DPYPHYYAYICYTLMDEHENANKALELAWERAKHHSAYQELKAEILDIKNHA
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA