| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62185322
Identifier: 62185322
GI number: 62185322
Start: 820521
End: 821999
Strand: Direct
Name: 62185322
Synonym: CAB709
Alternate gene names: NA
Gene position: 820521-821999 (Clockwise)
Preceding gene: 62185321
Following gene: 62185327
Centisome position: 71.7
GC content: 39.15
Gene sequence:
>1479_bases ATGACAGCATCTTGTGCAGTAACAGCCGGTTCAACTGCAGAAAGTACGGAGATCGATTTACTAGCTACAGCATCAGAAAC TGAAGCATCTGCAACAACCGACGCTGAGGTGAGTGTTCCTGATTGCTGTCAGATGGCTATTTTGCGTTCCATGTCGGATG CCTGTCTAAGCTTATTGAACCAATCAGGTTCGGTATTCTCACAATTTTCTCCTCAAAACAAACCGGCACCTTCAGAAACT CTATTGGCAAAAAATGGTATGTTGATGAAATCTTCATCTCTACCTAATCTATCATCACAAAAATCCCTGGATACATTTTC TTCAACTGATAGAAACCCTTCTTTACAACAAGCTCGGCTATATTCTTCTTTTACCTCAACAAAAGAAGAAAAAACTCCAT CGAGCTCAGTATTTTTTTCTTGTCCAGCTCCTAAAGACGCAAGTCTCATAGCAAAAACAACAACATTACTCTTAAAGCTG CCAGAATCTAAAGAAGATGGAGATAGTCGAGATAAGTCTTCTTTTAATCTATGTTCAACAAAAGTTCAAGTGCACACCTA CGACAAGGAAACAATAAAAGCGCATAGCTCTAAAAACTCGACGAAAACTTCTGAAGAATCTGCAAAATCCTCCCCTTCTT TACCAAAACCTTCTACGTCTTCTCTCAGTCCTCTGGCCCTATTTAGCCATGTACAAAAAGAAATTACGGAAACACGTCGC GATACTCAATCTCAAGAAAAAGAAGAAGGCCAGGGAGAACAAGGACAACAAGAACACCAAGAGCAACAACAGCATAAACA GAAAAAAGACTTGGCTATTGAAGAACTTTCTCATCAAATATCTTTTCATTATACGCCATCTTGCAGTTTACCTAAGGAGA TTGTTGAATTTTCTCTTACAGAAGCTCAGCTGAGCTCATTGATGCATATGCGCGTATCGAATCTAGATATTCTTAAAATC TGTGCAGAAATTATGAAGCTGATGTTGAACAGCCGAGAGCAGGATAATCTCGCCCGTTTAGAAGCTAGAAAACATCTTTT AGAAAAAGCCCACGAACTTATTGAAAGTTATGAAAGTCAAGCTAAGCTTTCTCAATGGTTAGGGATTGCTACAGCAACTT TAGGAATTCTAGGTGCTGCTACTCCTATCATCGGAGAAATCTCTGGGAAACAGATTCTTGGATTTATCCAGCAACATACA GGATTGTGGAAAAAAGCAACAGCGCATACCTTCTTCAAAGGCATGGGAAAAATGTGTTCCTCCCTATCACAACTTACAGA AACCTCGTCTAAAATCTATGAATTAAAAGAAACAGCATCAAGAACATTTGCAGAAAACTATAAAGAGATATTCCGCATAG AACATGATGAAATCACCCGATCTATTGAAGAGGTGAAAGATCATTGGAAAAATATGGACAATTTCCTCTTGCAAATACTA CAAACAGAGCACGATGCTGTTCGCAGCCTCTACCAATAG
Upstream 100 bases:
>100_bases CATGACTCTTTCGAAAATCTCGTGCGCATGCTACAGTTGTGCAGAGAAATCGACAGAACGTTTCTGGAATCTCTAAAGTA AATTTTTTGTAAGGAATCTT
Downstream 100 bases:
>100_bases AAAGCCTTTATTTCCTTATATTTTTATATGCTTTCGTCTTCCCCCAAGGGAAAATGACATTGCAGCTTTTCTCAGTGAAA AACAACTGATCCCCTCCAGG
Product: putative serine-rich protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 492; Mature: 491
Protein sequence:
>492_residues MTASCAVTAGSTAESTEIDLLATASETEASATTDAEVSVPDCCQMAILRSMSDACLSLLNQSGSVFSQFSPQNKPAPSET LLAKNGMLMKSSSLPNLSSQKSLDTFSSTDRNPSLQQARLYSSFTSTKEEKTPSSSVFFSCPAPKDASLIAKTTTLLLKL PESKEDGDSRDKSSFNLCSTKVQVHTYDKETIKAHSSKNSTKTSEESAKSSPSLPKPSTSSLSPLALFSHVQKEITETRR DTQSQEKEEGQGEQGQQEHQEQQQHKQKKDLAIEELSHQISFHYTPSCSLPKEIVEFSLTEAQLSSLMHMRVSNLDILKI CAEIMKLMLNSREQDNLARLEARKHLLEKAHELIESYESQAKLSQWLGIATATLGILGAATPIIGEISGKQILGFIQQHT GLWKKATAHTFFKGMGKMCSSLSQLTETSSKIYELKETASRTFAENYKEIFRIEHDEITRSIEEVKDHWKNMDNFLLQIL QTEHDAVRSLYQ
Sequences:
>Translated_492_residues MTASCAVTAGSTAESTEIDLLATASETEASATTDAEVSVPDCCQMAILRSMSDACLSLLNQSGSVFSQFSPQNKPAPSET LLAKNGMLMKSSSLPNLSSQKSLDTFSSTDRNPSLQQARLYSSFTSTKEEKTPSSSVFFSCPAPKDASLIAKTTTLLLKL PESKEDGDSRDKSSFNLCSTKVQVHTYDKETIKAHSSKNSTKTSEESAKSSPSLPKPSTSSLSPLALFSHVQKEITETRR DTQSQEKEEGQGEQGQQEHQEQQQHKQKKDLAIEELSHQISFHYTPSCSLPKEIVEFSLTEAQLSSLMHMRVSNLDILKI CAEIMKLMLNSREQDNLARLEARKHLLEKAHELIESYESQAKLSQWLGIATATLGILGAATPIIGEISGKQILGFIQQHT GLWKKATAHTFFKGMGKMCSSLSQLTETSSKIYELKETASRTFAENYKEIFRIEHDEITRSIEEVKDHWKNMDNFLLQIL QTEHDAVRSLYQ >Mature_491_residues TASCAVTAGSTAESTEIDLLATASETEASATTDAEVSVPDCCQMAILRSMSDACLSLLNQSGSVFSQFSPQNKPAPSETL LAKNGMLMKSSSLPNLSSQKSLDTFSSTDRNPSLQQARLYSSFTSTKEEKTPSSSVFFSCPAPKDASLIAKTTTLLLKLP ESKEDGDSRDKSSFNLCSTKVQVHTYDKETIKAHSSKNSTKTSEESAKSSPSLPKPSTSSLSPLALFSHVQKEITETRRD TQSQEKEEGQGEQGQQEHQEQQQHKQKKDLAIEELSHQISFHYTPSCSLPKEIVEFSLTEAQLSSLMHMRVSNLDILKIC AEIMKLMLNSREQDNLARLEARKHLLEKAHELIESYESQAKLSQWLGIATATLGILGAATPIIGEISGKQILGFIQQHTG LWKKATAHTFFKGMGKMCSSLSQLTETSSKIYELKETASRTFAENYKEIFRIEHDEITRSIEEVKDHWKNMDNFLLQILQ TEHDAVRSLYQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54523; Mature: 54392
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASCAVTAGSTAESTEIDLLATASETEASATTDAEVSVPDCCQMAILRSMSDACLSLLN CCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH QSGSVFSQFSPQNKPAPSETLLAKNGMLMKSSSLPNLSSQKSLDTFSSTDRNPSLQQARL CCCCHHHHCCCCCCCCCCHHHHHCCCCEEECCCCCCCCCHHCCHHHHCCCCCCCHHHHHH YSSFTSTKEEKTPSSSVFFSCPAPKDASLIAKTTTLLLKLPESKEDGDSRDKSSFNLCST HHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHE KVQVHTYDKETIKAHSSKNSTKTSEESAKSSPSLPKPSTSSLSPLALFSHVQKEITETRR EEEEEECCHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH DTQSQEKEEGQGEQGQQEHQEQQQHKQKKDLAIEELSHQISFHYTPSCSLPKEIVEFSLT HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHH EAQLSSLMHMRVSNLDILKICAEIMKLMLNSREQDNLARLEARKHLLEKAHELIESYESQ HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AKLSQWLGIATATLGILGAATPIIGEISGKQILGFIQQHTGLWKKATAHTFFKGMGKMCS HHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH SLSQLTETSSKIYELKETASRTFAENYKEIFRIEHDEITRSIEEVKDHWKNMDNFLLQIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH QTEHDAVRSLYQ HHHHHHHHHHCC >Mature Secondary Structure TASCAVTAGSTAESTEIDLLATASETEASATTDAEVSVPDCCQMAILRSMSDACLSLLN CCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH QSGSVFSQFSPQNKPAPSETLLAKNGMLMKSSSLPNLSSQKSLDTFSSTDRNPSLQQARL CCCCHHHHCCCCCCCCCCHHHHHCCCCEEECCCCCCCCCHHCCHHHHCCCCCCCHHHHHH YSSFTSTKEEKTPSSSVFFSCPAPKDASLIAKTTTLLLKLPESKEDGDSRDKSSFNLCST HHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHE KVQVHTYDKETIKAHSSKNSTKTSEESAKSSPSLPKPSTSSLSPLALFSHVQKEITETRR EEEEEECCHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH DTQSQEKEEGQGEQGQQEHQEQQQHKQKKDLAIEELSHQISFHYTPSCSLPKEIVEFSLT HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHH EAQLSSLMHMRVSNLDILKICAEIMKLMLNSREQDNLARLEARKHLLEKAHELIESYESQ HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AKLSQWLGIATATLGILGAATPIIGEISGKQILGFIQQHTGLWKKATAHTFFKGMGKMCS HHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH SLSQLTETSSKIYELKETASRTFAENYKEIFRIEHDEITRSIEEVKDHWKNMDNFLLQIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH QTEHDAVRSLYQ HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA