| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is aroDE [H]
Identifier: 62185307
GI number: 62185307
Start: 804396
End: 805829
Strand: Direct
Name: aroDE [H]
Synonym: CAB694
Alternate gene names: 62185307
Gene position: 804396-805829 (Clockwise)
Preceding gene: 62185306
Following gene: 62185308
Centisome position: 70.29
GC content: 40.24
Gene sequence:
>1434_bases ATGCTATGTGCAACAATTAGTGGGCCTACGTTTGCTGAAGCTAAACAGCAACTTTTACACTCCTTACCTCTAGTCGATAG TATAGAGTTACGCATTGATTGTCTTTTATCCCTGTCTTCAAATGAACTCAAGCATCTCGTCTCCTTAGCAAAAAAACCTA TTCTTACGTTAAGAAAGCACACGAGCCTTTCTGAAATAGCATGGATAGAACGTACTCTACAACTTGCAGAGTTACAGCCT GAATACCTGGATATTGACAAAGACTTCCCCAAAGAAGCTTTAGCAAAAATCCAGAAGAATTATCCGAAAATAAAAATTAT TCTCTCTTATCATAGTGAAACTTCCGAACACATTCCTAATCTCTGTAAGGAAATGCTGAGGCAACAAGCCCATCATTACA AAATTGCTATTACATCAACAAAATCTACAGATACTCTCCGCTGCATACAAATAAAAAAACACCTGCCCGAAAATACCACG CTACTTTGTATGGGAAACGCAGGCATAGCCTCGCGCATCCTTTCACCATTAATGAAAAATGCGATTAATTATGCCTCTGG CATCCACGCTCCCAAAGTAGCCCCAGGACAGCTATCCATAGAAGATTTACTAGCATACAACTATACGAATCTCTCTGCAG AGGCTCGTATCTATGGTCTGATTGGTAACCCTGTAGACCGTAGCATCAGTCATCTTTCCCATAATAAATTATTTTCAGAG CTACAGCTCAACATGAGCTACATAAAAATTCTACTTGCCCCCTATGAACTGAACGAATTTTTCTCTTTAACTCGTGATCT TCCTTTTGGTGGTCTGAGTGTTACCATGCCCTTTAAAACCGCTGTTCTTGAATATATCGATATTCTTGATCCCTCTGTAC AACAGTGTCAGTCTTGCAATACCTTAGTTTTCCACAATAATAAGATTGCGGGATACAACACCGATGGTTTAGGGCTACTC AATCTTTTAAAACGTAAGAACATCCCTTTACAAAACATGCATGTGGGCATAGTGGGATCTGGAGGCGCAGCAAAAGCCAT AGCCACCACATTCGCGTATTCAGGAGCGCAGATTAGTATTTTCAACCGTACGAAAGCTCACGCAGAAAAACTCTCTGTGT TATGTCATGGTCAAGCTTTCCCTCTACATTCCTTATCAGAACACCACAACATCGATATTCTAATTTTATGTCTGCCTCCC GGTGTAGACATACCTGAAATCTACCCTCCTGTGATTATCGATATTAACACACTACCCAAAGAATCCCTCTACACGAAAAA AGCTAAAGAGCGCGGTTGTCAGATTCTTTACGGCTACGAAATGTTTGCTGAGCAAGCCCTCCTACAATTTTCCTTATGGT TTCCAGATAAACTCTCTCAAGAGAATAGAGAAAGATTCCGTCTGAGTGTAGAAAATATTATTAGCACTATGTAA
Upstream 100 bases:
>100_bases GTTATGATGGAAGATGCAGGCAAGGCAACTTCATGTAATGGCATCTATTGTACAGTGCCAAAAATGGCTATCCTTTATGA AATTCTAAAAAGTGAATGCT
Downstream 100 bases:
>100_bases AAAATTTCTATTTTGCTTTATACTTTTTGAAATTTTTTATTCTTTCTCCCATGCAAAAGTACTGGCTATTTTTCTTTTTT CTTTTTCCTACGCTTAGTGA
Product: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein
Products: NA
Alternate protein names: 3-dehydroquinate dehydratase; 3-dehydroquinase; Type I DHQase; Shikimate dehydrogenase [H]
Number of amino acids: Translated: 477; Mature: 477
Protein sequence:
>477_residues MLCATISGPTFAEAKQQLLHSLPLVDSIELRIDCLLSLSSNELKHLVSLAKKPILTLRKHTSLSEIAWIERTLQLAELQP EYLDIDKDFPKEALAKIQKNYPKIKIILSYHSETSEHIPNLCKEMLRQQAHHYKIAITSTKSTDTLRCIQIKKHLPENTT LLCMGNAGIASRILSPLMKNAINYASGIHAPKVAPGQLSIEDLLAYNYTNLSAEARIYGLIGNPVDRSISHLSHNKLFSE LQLNMSYIKILLAPYELNEFFSLTRDLPFGGLSVTMPFKTAVLEYIDILDPSVQQCQSCNTLVFHNNKIAGYNTDGLGLL NLLKRKNIPLQNMHVGIVGSGGAAKAIATTFAYSGAQISIFNRTKAHAEKLSVLCHGQAFPLHSLSEHHNIDILILCLPP GVDIPEIYPPVIIDINTLPKESLYTKKAKERGCQILYGYEMFAEQALLQFSLWFPDKLSQENRERFRLSVENIISTM
Sequences:
>Translated_477_residues MLCATISGPTFAEAKQQLLHSLPLVDSIELRIDCLLSLSSNELKHLVSLAKKPILTLRKHTSLSEIAWIERTLQLAELQP EYLDIDKDFPKEALAKIQKNYPKIKIILSYHSETSEHIPNLCKEMLRQQAHHYKIAITSTKSTDTLRCIQIKKHLPENTT LLCMGNAGIASRILSPLMKNAINYASGIHAPKVAPGQLSIEDLLAYNYTNLSAEARIYGLIGNPVDRSISHLSHNKLFSE LQLNMSYIKILLAPYELNEFFSLTRDLPFGGLSVTMPFKTAVLEYIDILDPSVQQCQSCNTLVFHNNKIAGYNTDGLGLL NLLKRKNIPLQNMHVGIVGSGGAAKAIATTFAYSGAQISIFNRTKAHAEKLSVLCHGQAFPLHSLSEHHNIDILILCLPP GVDIPEIYPPVIIDINTLPKESLYTKKAKERGCQILYGYEMFAEQALLQFSLWFPDKLSQENRERFRLSVENIISTM >Mature_477_residues MLCATISGPTFAEAKQQLLHSLPLVDSIELRIDCLLSLSSNELKHLVSLAKKPILTLRKHTSLSEIAWIERTLQLAELQP EYLDIDKDFPKEALAKIQKNYPKIKIILSYHSETSEHIPNLCKEMLRQQAHHYKIAITSTKSTDTLRCIQIKKHLPENTT LLCMGNAGIASRILSPLMKNAINYASGIHAPKVAPGQLSIEDLLAYNYTNLSAEARIYGLIGNPVDRSISHLSHNKLFSE LQLNMSYIKILLAPYELNEFFSLTRDLPFGGLSVTMPFKTAVLEYIDILDPSVQQCQSCNTLVFHNNKIAGYNTDGLGLL NLLKRKNIPLQNMHVGIVGSGGAAKAIATTFAYSGAQISIFNRTKAHAEKLSVLCHGQAFPLHSLSEHHNIDILILCLPP GVDIPEIYPPVIIDINTLPKESLYTKKAKERGCQILYGYEMFAEQALLQFSLWFPDKLSQENRERFRLSVENIISTM
Specific function: Bifunctional enzyme that catalyzes two sequential steps of the aromatic amino acids biosynthetic pathway. The first reaction is catalyzed by the 3-dehydroquinate dehydratase, coded by the AroD domain; the second reaction is catalyzed by the shikimate 5-de
COG id: COG0169
COG function: function code E; Shikimate 5-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the shikimate dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1787983, Length=279, Percent_Identity=24.7311827956989, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1789675, Length=262, Percent_Identity=29.3893129770992, Blast_Score=83, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6320332, Length=505, Percent_Identity=22.3762376237624, Blast_Score=84, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001381 - InterPro: IPR016040 - InterPro: IPR011342 - InterPro: IPR013708 - InterPro: IPR022893 - InterPro: IPR006151 [H]
Pfam domain/function: PF01487 DHquinase_I; PF01488 Shikimate_DH; PF08501 Shikimate_dh_N [H]
EC number: =4.2.1.10; =1.1.1.25 [H]
Molecular weight: Translated: 53410; Mature: 53410
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: PS00104 EPSP_SYNTHASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLCATISGPTFAEAKQQLLHSLPLVDSIELRIDCLLSLSSNELKHLVSLAKKPILTLRKH CEEEECCCCCHHHHHHHHHHHCCCCCCHHEEEEEEEECCHHHHHHHHHHHHCCHHHHHHC TSLSEIAWIERTLQLAELQPEYLDIDKDFPKEALAKIQKNYPKIKIILSYHSETSEHIPN CCHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCHHHHHHH LCKEMLRQQAHHYKIAITSTKSTDTLRCIQIKKHLPENTTLLCMGNAGIASRILSPLMKN HHHHHHHHHHCEEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHH AINYASGIHAPKVAPGQLSIEDLLAYNYTNLSAEARIYGLIGNPVDRSISHLSHNKLFSE HHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH LQLNMSYIKILLAPYELNEFFSLTRDLPFGGLSVTMPFKTAVLEYIDILDPSVQQCQSCN HHHHHHHHHHEECCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHCCCCHHHHHCCC TLVFHNNKIAGYNTDGLGLLNLLKRKNIPLQNMHVGIVGSGGAAKAIATTFAYSGAQISI EEEEECCEECCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHEECCCEEEE FNRTKAHAEKLSVLCHGQAFPLHSLSEHHNIDILILCLPPGVDIPEIYPPVIIDINTLPK ECCHHHHHHHHHHEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCC ESLYTKKAKERGCQILYGYEMFAEQALLQFSLWFPDKLSQENRERFRLSVENIISTM HHHHHHHHHHCCCEEEEHHHHHHHHHHHHEECCCCHHCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLCATISGPTFAEAKQQLLHSLPLVDSIELRIDCLLSLSSNELKHLVSLAKKPILTLRKH CEEEECCCCCHHHHHHHHHHHCCCCCCHHEEEEEEEECCHHHHHHHHHHHHCCHHHHHHC TSLSEIAWIERTLQLAELQPEYLDIDKDFPKEALAKIQKNYPKIKIILSYHSETSEHIPN CCHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCHHHHHHH LCKEMLRQQAHHYKIAITSTKSTDTLRCIQIKKHLPENTTLLCMGNAGIASRILSPLMKN HHHHHHHHHHCEEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHH AINYASGIHAPKVAPGQLSIEDLLAYNYTNLSAEARIYGLIGNPVDRSISHLSHNKLFSE HHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH LQLNMSYIKILLAPYELNEFFSLTRDLPFGGLSVTMPFKTAVLEYIDILDPSVQQCQSCN HHHHHHHHHHEECCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHCCCCHHHHHCCC TLVFHNNKIAGYNTDGLGLLNLLKRKNIPLQNMHVGIVGSGGAAKAIATTFAYSGAQISI EEEEECCEECCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHEECCCEEEE FNRTKAHAEKLSVLCHGQAFPLHSLSEHHNIDILILCLPPGVDIPEIYPPVIIDINTLPK ECCHHHHHHHHHHEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCC ESLYTKKAKERGCQILYGYEMFAEQALLQFSLWFPDKLSQENRERFRLSVENIISTM HHHHHHHHHHCCCEEEEHHHHHHHHHHHHEECCCCHHCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]