Definition Chlamydophila abortus S26/3, complete genome.
Accession NC_004552
Length 1,144,377

Click here to switch to the map view.

The map label for this gene is 62185308

Identifier: 62185308

GI number: 62185308

Start: 805880

End: 806674

Strand: Direct

Name: 62185308

Synonym: CAB695

Alternate gene names: NA

Gene position: 805880-806674 (Clockwise)

Preceding gene: 62185307

Following gene: 62185309

Centisome position: 70.42

GC content: 38.11

Gene sequence:

>795_bases
ATGCAAAAGTACTGGCTATTTTTCTTTTTTCTTTTTCCTACGCTTAGTGACTGTACAGAAACCTCGCGTTATGTAGAGGT
AAAATCCATTCATGAGGTTGCAGGGGATATCCTGTATGATGATGCAGATTTCTGGTTAATACTTGATCTTGATGACACGT
TACTCGAAGGAGCTGAGGCTCTAACACAAACATCGTGGCTCCAGAAAACAATAGAAGGATTTCAACAACTCGGCCTCTCT
GAAAGTGAAGCTTGGCAAACTGTCTACCCTTATTGGGAAGGGTTCCTAGAAAAAGGATCGGTAAAAACTATAGAAAATAC
TATGCAGATCCTCATCTCAAAAGTCCAAGAAAAACAGAAAACCCTGTTTGTTTATACAGAGCGTAAACATTCCTCAAAAG
CGATTACTCTACAGCAACTAAAAAGCTTAGGTCTATCTTTAGAAAGTACAGCTCCTGTGGTAACTCATGAACTTCCAAAA
AGTATCCTTTTTTCTTCTGGGGTATTGTTTGGAGAAGAACTCCACAAAGGACCAGGACTCCAAATCTTCTTAGATACTAT
CGCAGCCTGTCCTGAAAAAATTATCTACGTGGATAATTCCAAAGAAAACGTGGCACGCGTTGGGGAGCTATGTAAATTAA
AAAAAATTTCTTATCTTGGAATTACTTACTCAGCTAAAAAATTCTTACCTCCAGTATATCATCCGGAAATCTCTAAGGTC
CAATATACATACACACAAAAACTTCTTAGCAATGAGGCTGCTGCTTTATTACTCAGACACCAAATGATAGAATAA

Upstream 100 bases:

>100_bases
ATAGAGAAAGATTCCGTCTGAGTGTAGAAAATATTATTAGCACTATGTAAAAAATTTCTATTTTGCTTTATACTTTTTGA
AATTTTTTATTCTTTCTCCC

Downstream 100 bases:

>100_bases
CATTAAGATAACAATTCCTCTATTTTCTCCAAAAATGATGGCATAAAAAAAACTTTTTTTTTTAGAGTCACAAAAAAGAA
CCACGTATCTTTTCTTTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MQKYWLFFFFLFPTLSDCTETSRYVEVKSIHEVAGDILYDDADFWLILDLDDTLLEGAEALTQTSWLQKTIEGFQQLGLS
ESEAWQTVYPYWEGFLEKGSVKTIENTMQILISKVQEKQKTLFVYTERKHSSKAITLQQLKSLGLSLESTAPVVTHELPK
SILFSSGVLFGEELHKGPGLQIFLDTIAACPEKIIYVDNSKENVARVGELCKLKKISYLGITYSAKKFLPPVYHPEISKV
QYTYTQKLLSNEAAALLLRHQMIE

Sequences:

>Translated_264_residues
MQKYWLFFFFLFPTLSDCTETSRYVEVKSIHEVAGDILYDDADFWLILDLDDTLLEGAEALTQTSWLQKTIEGFQQLGLS
ESEAWQTVYPYWEGFLEKGSVKTIENTMQILISKVQEKQKTLFVYTERKHSSKAITLQQLKSLGLSLESTAPVVTHELPK
SILFSSGVLFGEELHKGPGLQIFLDTIAACPEKIIYVDNSKENVARVGELCKLKKISYLGITYSAKKFLPPVYHPEISKV
QYTYTQKLLSNEAAALLLRHQMIE
>Mature_264_residues
MQKYWLFFFFLFPTLSDCTETSRYVEVKSIHEVAGDILYDDADFWLILDLDDTLLEGAEALTQTSWLQKTIEGFQQLGLS
ESEAWQTVYPYWEGFLEKGSVKTIENTMQILISKVQEKQKTLFVYTERKHSSKAITLQQLKSLGLSLESTAPVVTHELPK
SILFSSGVLFGEELHKGPGLQIFLDTIAACPEKIIYVDNSKENVARVGELCKLKKISYLGITYSAKKFLPPVYHPEISKV
QYTYTQKLLSNEAAALLLRHQMIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022565 [H]

Pfam domain/function: PF11019 DUF2608 [H]

EC number: NA

Molecular weight: Translated: 30135; Mature: 30135

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKYWLFFFFLFPTLSDCTETSRYVEVKSIHEVAGDILYDDADFWLILDLDDTLLEGAEA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCHHHHHHHHH
LTQTSWLQKTIEGFQQLGLSESEAWQTVYPYWEGFLEKGSVKTIENTMQILISKVQEKQK
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
TLFVYTERKHSSKAITLQQLKSLGLSLESTAPVVTHELPKSILFSSGVLFGEELHKGPGL
EEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCC
QIFLDTIAACPEKIIYVDNSKENVARVGELCKLKKISYLGITYSAKKFLPPVYHPEISKV
EEHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHEEEEEEECHHHHCCCCCCCCCHHH
QYTYTQKLLSNEAAALLLRHQMIE
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQKYWLFFFFLFPTLSDCTETSRYVEVKSIHEVAGDILYDDADFWLILDLDDTLLEGAEA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCHHHHHHHHH
LTQTSWLQKTIEGFQQLGLSESEAWQTVYPYWEGFLEKGSVKTIENTMQILISKVQEKQK
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
TLFVYTERKHSSKAITLQQLKSLGLSLESTAPVVTHELPKSILFSSGVLFGEELHKGPGL
EEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCC
QIFLDTIAACPEKIIYVDNSKENVARVGELCKLKKISYLGITYSAKKFLPPVYHPEISKV
EEHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHEEEEEEECHHHHCCCCCCCCCHHH
QYTYTQKLLSNEAAALLLRHQMIE
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9784136 [H]