| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62185308
Identifier: 62185308
GI number: 62185308
Start: 805880
End: 806674
Strand: Direct
Name: 62185308
Synonym: CAB695
Alternate gene names: NA
Gene position: 805880-806674 (Clockwise)
Preceding gene: 62185307
Following gene: 62185309
Centisome position: 70.42
GC content: 38.11
Gene sequence:
>795_bases ATGCAAAAGTACTGGCTATTTTTCTTTTTTCTTTTTCCTACGCTTAGTGACTGTACAGAAACCTCGCGTTATGTAGAGGT AAAATCCATTCATGAGGTTGCAGGGGATATCCTGTATGATGATGCAGATTTCTGGTTAATACTTGATCTTGATGACACGT TACTCGAAGGAGCTGAGGCTCTAACACAAACATCGTGGCTCCAGAAAACAATAGAAGGATTTCAACAACTCGGCCTCTCT GAAAGTGAAGCTTGGCAAACTGTCTACCCTTATTGGGAAGGGTTCCTAGAAAAAGGATCGGTAAAAACTATAGAAAATAC TATGCAGATCCTCATCTCAAAAGTCCAAGAAAAACAGAAAACCCTGTTTGTTTATACAGAGCGTAAACATTCCTCAAAAG CGATTACTCTACAGCAACTAAAAAGCTTAGGTCTATCTTTAGAAAGTACAGCTCCTGTGGTAACTCATGAACTTCCAAAA AGTATCCTTTTTTCTTCTGGGGTATTGTTTGGAGAAGAACTCCACAAAGGACCAGGACTCCAAATCTTCTTAGATACTAT CGCAGCCTGTCCTGAAAAAATTATCTACGTGGATAATTCCAAAGAAAACGTGGCACGCGTTGGGGAGCTATGTAAATTAA AAAAAATTTCTTATCTTGGAATTACTTACTCAGCTAAAAAATTCTTACCTCCAGTATATCATCCGGAAATCTCTAAGGTC CAATATACATACACACAAAAACTTCTTAGCAATGAGGCTGCTGCTTTATTACTCAGACACCAAATGATAGAATAA
Upstream 100 bases:
>100_bases ATAGAGAAAGATTCCGTCTGAGTGTAGAAAATATTATTAGCACTATGTAAAAAATTTCTATTTTGCTTTATACTTTTTGA AATTTTTTATTCTTTCTCCC
Downstream 100 bases:
>100_bases CATTAAGATAACAATTCCTCTATTTTCTCCAAAAATGATGGCATAAAAAAAACTTTTTTTTTTAGAGTCACAAAAAAGAA CCACGTATCTTTTCTTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MQKYWLFFFFLFPTLSDCTETSRYVEVKSIHEVAGDILYDDADFWLILDLDDTLLEGAEALTQTSWLQKTIEGFQQLGLS ESEAWQTVYPYWEGFLEKGSVKTIENTMQILISKVQEKQKTLFVYTERKHSSKAITLQQLKSLGLSLESTAPVVTHELPK SILFSSGVLFGEELHKGPGLQIFLDTIAACPEKIIYVDNSKENVARVGELCKLKKISYLGITYSAKKFLPPVYHPEISKV QYTYTQKLLSNEAAALLLRHQMIE
Sequences:
>Translated_264_residues MQKYWLFFFFLFPTLSDCTETSRYVEVKSIHEVAGDILYDDADFWLILDLDDTLLEGAEALTQTSWLQKTIEGFQQLGLS ESEAWQTVYPYWEGFLEKGSVKTIENTMQILISKVQEKQKTLFVYTERKHSSKAITLQQLKSLGLSLESTAPVVTHELPK SILFSSGVLFGEELHKGPGLQIFLDTIAACPEKIIYVDNSKENVARVGELCKLKKISYLGITYSAKKFLPPVYHPEISKV QYTYTQKLLSNEAAALLLRHQMIE >Mature_264_residues MQKYWLFFFFLFPTLSDCTETSRYVEVKSIHEVAGDILYDDADFWLILDLDDTLLEGAEALTQTSWLQKTIEGFQQLGLS ESEAWQTVYPYWEGFLEKGSVKTIENTMQILISKVQEKQKTLFVYTERKHSSKAITLQQLKSLGLSLESTAPVVTHELPK SILFSSGVLFGEELHKGPGLQIFLDTIAACPEKIIYVDNSKENVARVGELCKLKKISYLGITYSAKKFLPPVYHPEISKV QYTYTQKLLSNEAAALLLRHQMIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022565 [H]
Pfam domain/function: PF11019 DUF2608 [H]
EC number: NA
Molecular weight: Translated: 30135; Mature: 30135
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKYWLFFFFLFPTLSDCTETSRYVEVKSIHEVAGDILYDDADFWLILDLDDTLLEGAEA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCHHHHHHHHH LTQTSWLQKTIEGFQQLGLSESEAWQTVYPYWEGFLEKGSVKTIENTMQILISKVQEKQK HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC TLFVYTERKHSSKAITLQQLKSLGLSLESTAPVVTHELPKSILFSSGVLFGEELHKGPGL EEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCC QIFLDTIAACPEKIIYVDNSKENVARVGELCKLKKISYLGITYSAKKFLPPVYHPEISKV EEHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHEEEEEEECHHHHCCCCCCCCCHHH QYTYTQKLLSNEAAALLLRHQMIE HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQKYWLFFFFLFPTLSDCTETSRYVEVKSIHEVAGDILYDDADFWLILDLDDTLLEGAEA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCHHHHHHHHH LTQTSWLQKTIEGFQQLGLSESEAWQTVYPYWEGFLEKGSVKTIENTMQILISKVQEKQK HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC TLFVYTERKHSSKAITLQQLKSLGLSLESTAPVVTHELPKSILFSSGVLFGEELHKGPGL EEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCC QIFLDTIAACPEKIIYVDNSKENVARVGELCKLKKISYLGITYSAKKFLPPVYHPEISKV EEHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHEEEEEEECHHHHCCCCCCCCCHHH QYTYTQKLLSNEAAALLLRHQMIE HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9784136 [H]