| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is pyrG
Identifier: 62185186
GI number: 62185186
Start: 645667
End: 647280
Strand: Direct
Name: pyrG
Synonym: CAB570
Alternate gene names: 62185186
Gene position: 645667-647280 (Clockwise)
Preceding gene: 62185185
Following gene: 62185187
Centisome position: 56.42
GC content: 41.95
Gene sequence:
>1614_bases ATGTCATTCAAGTGCATCTTTTTAACAGGAGGAGTCGTATCCTCCTTAGGCAAGGGATTAACTGCTGCCTCACTTGCTCT ACTACTAGAGCGACAAGGACTTAAAGTTGCTATGTTAAAACTGGATCCTTATCTTAACGTCGATCCAGGAACAATGAATC CTTATGAACACGGTGAGGTTTACGTTACCAATGACGGTATAGAGACAGATCTCGACCTTGGTCATTATCATCGCTTTTCT TCAGTAAACCTATCTAGGTATTCTACAGCGACTTCAGGGCAAATCTATGCCCGAGTAATTAAAAAAGAACGCGATGGGTT GTATCTAGGAAGTACAGTTCAAGTTATCCCGCACATCACTAACGAAATCATCGAAGTTATCTTAGAGTGTGCTAGGGAAA ATCATCCCGATGTATTAATCGTAGAAATCGGTGGTACCGTTGGAGATATAGAATCCCTACCTTTCTTAGAAGCTATCCGA CAATTCCGTTATGAGCATGCTGAAGACTGCTTCAGCATTCATATGACCTACGTACCTTATTTACAAGCCGCAGGAGAGGT AAAAACCAAACCTACGCAGCACTCCGTCCAAAGTTTGCGAAGCATTGGCATTATTCCTGATGCGATTCTCTGCAGATCTG AAGCTCCTTTAAGCTCAGAAGTAAAAAAGAAAATCAGCCTATTTTGCAATGTTCCTAGTACCGCGGTTTTTAACGTTGTC GATGTGGAACATTCCATATACGAAATGCCCTTAATGTTATCTCAAGAAAAGATCTCTACGTTTATCACAGAAAAATTAGG ACTGTTTACTAAAAAAGAAGATCTAAGTGATTGGGAAATGTTAGTAGAACGTTTGCGCCATCCTCTTCCTAATAAGATAC GCTTAGGTTTAGTCGGTAAATACGTACAACATAAAGACGCGTATAAATCTGTTTTTGAGTCTATCACCCACGCCGCTTTA AGCTTGAATTGCTCAGTAGAGTTATTCCCTTTAGACTCTGATGATCCGCATTTCCTTGAAACCTTAGAACTCTGTGACGG CTGCCTGGTCCCCGGAGGTTTTGGGTCTCGAGGTTGGGAAGGGAAAATTATTGCCGCCAAGCTGTGCAGAGAAAGAGGGA TCCCTTATTTTGGAATCTGCTTAGGTATGCAGGTTCTCGTTGTTGAATATGCTCGTCACGTCCTCCATCTAGAACACGCA AACTCTACAGAAATGGACAAAGATACACCTGATCCTGTGATTTGTATGTTGGATTGGCAAGCTTCATTAATCGCTACAGG CGGTACGATGCGTCTTGGAGCCTATCCCTGTGCATTATCACCAGGAAGTAAAGTATACGCGATGTATGGGCAACCTGAAA TTATGGAACGCCATCGCCATCGCTATGAAGTGAATTTCAACTATATACAACAATTAAAAGATCACGGATTGGATATTGTG GGTACGTGCCCAGAACAAGGACTTTGCGAAATCGTAGAAATCAAAGATCACCCTTGGATGATAGGAGTACAATTCCACCC AGAATTCCTTTCAAAATTGATCAAGCCTCACCCACTCTTTGTAGGCTTTATCGAGGCAGCACTTCTTCACTCTAGGAATA AAACTTATGTCTAA
Upstream 100 bases:
>100_bases TACTAGAACACGGTGGATCCATTCATGTATGTGTAGTGGAAGCTAAGAGCCCTTCGGTGGATTATCCAGAAGATATCAGT AAGGTGGAAGAATACTTAAC
Downstream 100 bases:
>100_bases TCCTCAGGTAGCAAAAGTTTTCCTTGGTGTAGATTATGGAGAGAGGCGGATAGGTCTAGCCTACGCGGCCTACCCCCTGG GCATTAGTTTGCCCATAGGG
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase
Number of amino acids: Translated: 537; Mature: 536
Protein sequence:
>537_residues MSFKCIFLTGGVVSSLGKGLTAASLALLLERQGLKVAMLKLDPYLNVDPGTMNPYEHGEVYVTNDGIETDLDLGHYHRFS SVNLSRYSTATSGQIYARVIKKERDGLYLGSTVQVIPHITNEIIEVILECARENHPDVLIVEIGGTVGDIESLPFLEAIR QFRYEHAEDCFSIHMTYVPYLQAAGEVKTKPTQHSVQSLRSIGIIPDAILCRSEAPLSSEVKKKISLFCNVPSTAVFNVV DVEHSIYEMPLMLSQEKISTFITEKLGLFTKKEDLSDWEMLVERLRHPLPNKIRLGLVGKYVQHKDAYKSVFESITHAAL SLNCSVELFPLDSDDPHFLETLELCDGCLVPGGFGSRGWEGKIIAAKLCRERGIPYFGICLGMQVLVVEYARHVLHLEHA NSTEMDKDTPDPVICMLDWQASLIATGGTMRLGAYPCALSPGSKVYAMYGQPEIMERHRHRYEVNFNYIQQLKDHGLDIV GTCPEQGLCEIVEIKDHPWMIGVQFHPEFLSKLIKPHPLFVGFIEAALLHSRNKTYV
Sequences:
>Translated_537_residues MSFKCIFLTGGVVSSLGKGLTAASLALLLERQGLKVAMLKLDPYLNVDPGTMNPYEHGEVYVTNDGIETDLDLGHYHRFS SVNLSRYSTATSGQIYARVIKKERDGLYLGSTVQVIPHITNEIIEVILECARENHPDVLIVEIGGTVGDIESLPFLEAIR QFRYEHAEDCFSIHMTYVPYLQAAGEVKTKPTQHSVQSLRSIGIIPDAILCRSEAPLSSEVKKKISLFCNVPSTAVFNVV DVEHSIYEMPLMLSQEKISTFITEKLGLFTKKEDLSDWEMLVERLRHPLPNKIRLGLVGKYVQHKDAYKSVFESITHAAL SLNCSVELFPLDSDDPHFLETLELCDGCLVPGGFGSRGWEGKIIAAKLCRERGIPYFGICLGMQVLVVEYARHVLHLEHA NSTEMDKDTPDPVICMLDWQASLIATGGTMRLGAYPCALSPGSKVYAMYGQPEIMERHRHRYEVNFNYIQQLKDHGLDIV GTCPEQGLCEIVEIKDHPWMIGVQFHPEFLSKLIKPHPLFVGFIEAALLHSRNKTYV >Mature_536_residues SFKCIFLTGGVVSSLGKGLTAASLALLLERQGLKVAMLKLDPYLNVDPGTMNPYEHGEVYVTNDGIETDLDLGHYHRFSS VNLSRYSTATSGQIYARVIKKERDGLYLGSTVQVIPHITNEIIEVILECARENHPDVLIVEIGGTVGDIESLPFLEAIRQ FRYEHAEDCFSIHMTYVPYLQAAGEVKTKPTQHSVQSLRSIGIIPDAILCRSEAPLSSEVKKKISLFCNVPSTAVFNVVD VEHSIYEMPLMLSQEKISTFITEKLGLFTKKEDLSDWEMLVERLRHPLPNKIRLGLVGKYVQHKDAYKSVFESITHAALS LNCSVELFPLDSDDPHFLETLELCDGCLVPGGFGSRGWEGKIIAAKLCRERGIPYFGICLGMQVLVVEYARHVLHLEHAN STEMDKDTPDPVICMLDWQASLIATGGTMRLGAYPCALSPGSKVYAMYGQPEIMERHRHRYEVNFNYIQQLKDHGLDIVG TCPEQGLCEIVEIKDHPWMIGVQFHPEFLSKLIKPHPLFVGFIEAALLHSRNKTYV
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain
Homologues:
Organism=Homo sapiens, GI28559085, Length=551, Percent_Identity=44.1016333938294, Blast_Score=446, Evalue=1e-125, Organism=Homo sapiens, GI28559083, Length=551, Percent_Identity=44.1016333938294, Blast_Score=446, Evalue=1e-125, Organism=Homo sapiens, GI221316689, Length=551, Percent_Identity=44.1016333938294, Blast_Score=446, Evalue=1e-125, Organism=Homo sapiens, GI148491070, Length=551, Percent_Identity=43.7386569872958, Blast_Score=436, Evalue=1e-122, Organism=Escherichia coli, GI1789142, Length=540, Percent_Identity=51.4814814814815, Blast_Score=525, Evalue=1e-150, Organism=Caenorhabditis elegans, GI25148299, Length=602, Percent_Identity=37.7076411960133, Blast_Score=389, Evalue=1e-108, Organism=Saccharomyces cerevisiae, GI6322563, Length=565, Percent_Identity=41.2389380530973, Blast_Score=425, Evalue=1e-119, Organism=Saccharomyces cerevisiae, GI6319432, Length=561, Percent_Identity=39.572192513369, Blast_Score=410, Evalue=1e-115, Organism=Drosophila melanogaster, GI24664469, Length=552, Percent_Identity=45.2898550724638, Blast_Score=450, Evalue=1e-126, Organism=Drosophila melanogaster, GI21357815, Length=496, Percent_Identity=44.3548387096774, Blast_Score=385, Evalue=1e-107,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): PYRG_CHLAB (Q5L5S1)
Other databases:
- EMBL: CR848038 - RefSeq: YP_219971.1 - HSSP: P0A7E5 - ProteinModelPortal: Q5L5S1 - SMR: Q5L5S1 - GeneID: 3337638 - GenomeReviews: CR848038_GR - KEGG: cab:CAB570 - HOGENOM: HBG597806 - OMA: NIKIDPY - ProtClustDB: PRK05380 - BioCyc: CABO218497:CAB570-MONOMER - BRENDA: 6.3.4.2 - HAMAP: MF_01227 - InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 - TIGRFAMs: TIGR00337
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase
EC number: =6.3.4.2
Molecular weight: Translated: 60163; Mature: 60032
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: PS51273 GATASE_TYPE_1; PS00442 GATASE_TYPE_I
Important sites: ACT_SITE 380-380 ACT_SITE 506-506 ACT_SITE 508-508
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFKCIFLTGGVVSSLGKGLTAASLALLLERQGLKVAMLKLDPYLNVDPGTMNPYEHGEV CCEEEEEEECHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEE YVTNDGIETDLDLGHYHRFSSVNLSRYSTATSGQIYARVIKKERDGLYLGSTVQVIPHIT EEECCCCCCCCCCCHHHCCCCCCCHHCCCCCCCHHHHHHHHHCCCCEEECCHHHHHHHHH NEIIEVILECARENHPDVLIVEIGGTVGDIESLPFLEAIRQFRYEHAEDCFSIHMTYVPY HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LQAAGEVKTKPTQHSVQSLRSIGIIPDAILCRSEAPLSSEVKKKISLFCNVPSTAVFNVV HHHCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHEEECCCCCCEEEEE DVEHSIYEMPLMLSQEKISTFITEKLGLFTKKEDLSDWEMLVERLRHPLPNKIRLGLVGK ECCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEHHHHH YVQHKDAYKSVFESITHAALSLNCSVELFPLDSDDPHFLETLELCDGCLVPGGFGSRGWE HHHHHHHHHHHHHHHHHHHEEEECEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCC GKIIAAKLCRERGIPYFGICLGMQVLVVEYARHVLHLEHANSTEMDKDTPDPVICMLDWQ CCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEEEECC ASLIATGGTMRLGAYPCALSPGSKVYAMYGQPEIMERHRHRYEVNFNYIQQLKDHGLDIV EEEEECCCEEEECCCCEECCCCCCEEEEECCHHHHHHHCCEEEECHHHHHHHHHCCCEEE GTCPEQGLCEIVEIKDHPWMIGVQFHPEFLSKLIKPHPLFVGFIEAALLHSRNKTYV ECCCCCCCEEEEEECCCCEEEEEEECHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SFKCIFLTGGVVSSLGKGLTAASLALLLERQGLKVAMLKLDPYLNVDPGTMNPYEHGEV CEEEEEEECHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEE YVTNDGIETDLDLGHYHRFSSVNLSRYSTATSGQIYARVIKKERDGLYLGSTVQVIPHIT EEECCCCCCCCCCCHHHCCCCCCCHHCCCCCCCHHHHHHHHHCCCCEEECCHHHHHHHHH NEIIEVILECARENHPDVLIVEIGGTVGDIESLPFLEAIRQFRYEHAEDCFSIHMTYVPY HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LQAAGEVKTKPTQHSVQSLRSIGIIPDAILCRSEAPLSSEVKKKISLFCNVPSTAVFNVV HHHCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHEEECCCCCCEEEEE DVEHSIYEMPLMLSQEKISTFITEKLGLFTKKEDLSDWEMLVERLRHPLPNKIRLGLVGK ECCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEHHHHH YVQHKDAYKSVFESITHAALSLNCSVELFPLDSDDPHFLETLELCDGCLVPGGFGSRGWE HHHHHHHHHHHHHHHHHHHEEEECEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCC GKIIAAKLCRERGIPYFGICLGMQVLVVEYARHVLHLEHANSTEMDKDTPDPVICMLDWQ CCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEEEECC ASLIATGGTMRLGAYPCALSPGSKVYAMYGQPEIMERHRHRYEVNFNYIQQLKDHGLDIV EEEEECCCEEEECCCCEECCCCCCEEEEECCHHHHHHHCCEEEECHHHHHHHHHCCCEEE GTCPEQGLCEIVEIKDHPWMIGVQFHPEFLSKLIKPHPLFVGFIEAALLHSRNKTYV ECCCCCCCEEEEEECCCCEEEEEEECHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA