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The map label for this gene is ruvX [C]

Identifier: 62185187

GI number: 62185187

Start: 647273

End: 647725

Strand: Direct

Name: ruvX [C]

Synonym: CAB571

Alternate gene names: 62185187

Gene position: 647273-647725 (Clockwise)

Preceding gene: 62185186

Following gene: 62185188

Centisome position: 56.56

GC content: 46.14

Gene sequence:

>453_bases
ATGTCTAATCCTCAGGTAGCAAAAGTTTTCCTTGGTGTAGATTATGGAGAGAGGCGGATAGGTCTAGCCTACGCGGCCTA
CCCCCTGGGCATTAGTTTGCCCATAGGGTTTATAGCAACAGGAAAAACACTAGAAGCCACAGCCAAGCTTCTCGTTGGAA
TTATTCAAGAACGCCGCGTTTCCACTGTGGTATTAGGCAATCCTCTCCCCATGCAAAAAGGGCAAAAATCCGCCTTACAA
GAAGATATACTCAAGCTATCCTCTTTACTCCAAGAGTCCTGTCCTGTTGAAGTTATCCTTTGGGATGAAAGGCTATCCTC
AGCACAAGCAGAACGGATGCTAAAAGGAGACTGCGGACTCAGCAGGAAAAAGAGAAAAGGAAAAACCGATAGCATCGCTG
CAACCCTGATTCTGACTAGCTTCTTAGAACATTCTCCTCGCTTACCCTCTTAA

Upstream 100 bases:

>100_bases
GTACAATTCCACCCAGAATTCCTTTCAAAATTGATCAAGCCTCACCCACTCTTTGTAGGCTTTATCGAGGCAGCACTTCT
TCACTCTAGGAATAAAACTT

Downstream 100 bases:

>100_bases
TCTGGTTGCAGCTATATATTCCTTGACAACAAGGACAAAGTCTTACCCGTTTATTAAAACTCGTTTCATCTTTTTTTCTT
ATATAAATTATTTAAATTCA

Product: Holliday junction resolvase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MSNPQVAKVFLGVDYGERRIGLAYAAYPLGISLPIGFIATGKTLEATAKLLVGIIQERRVSTVVLGNPLPMQKGQKSALQ
EDILKLSSLLQESCPVEVILWDERLSSAQAERMLKGDCGLSRKKRKGKTDSIAATLILTSFLEHSPRLPS

Sequences:

>Translated_150_residues
MSNPQVAKVFLGVDYGERRIGLAYAAYPLGISLPIGFIATGKTLEATAKLLVGIIQERRVSTVVLGNPLPMQKGQKSALQ
EDILKLSSLLQESCPVEVILWDERLSSAQAERMLKGDCGLSRKKRKGKTDSIAATLILTSFLEHSPRLPS
>Mature_149_residues
SNPQVAKVFLGVDYGERRIGLAYAAYPLGISLPIGFIATGKTLEATAKLLVGIIQERRVSTVVLGNPLPMQKGQKSALQE
DILKLSSLLQESCPVEVILWDERLSSAQAERMLKGDCGLSRKKRKGKTDSIAATLILTSFLEHSPRLPS

Specific function: Could be a nuclease that resolves Holliday junction intermediates in genetic recombination

COG id: COG0816

COG function: function code L; Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yqgF HJR family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RUVX_CHLAB (Q5L5S0)

Other databases:

- EMBL:   CR848038
- RefSeq:   YP_219972.1
- HSSP:   O34634
- ProteinModelPortal:   Q5L5S0
- SMR:   Q5L5S0
- GeneID:   3338198
- GenomeReviews:   CR848038_GR
- KEGG:   cab:CAB571
- HOGENOM:   HBG607919
- OMA:   VEVILWD
- ProtClustDB:   PRK00109
- BioCyc:   CABO218497:CAB571-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00651
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR012337
- Gene3D:   G3DSA:3.30.420.140
- SMART:   SM00732
- TIGRFAMs:   TIGR00250

Pfam domain/function: PF03652 UPF0081; SSF53098 RNaseH_fold

EC number: NA

Molecular weight: Translated: 16305; Mature: 16174

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNPQVAKVFLGVDYGERRIGLAYAAYPLGISLPIGFIATGKTLEATAKLLVGIIQERRV
CCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCC
STVVLGNPLPMQKGQKSALQEDILKLSSLLQESCPVEVILWDERLSSAQAERMLKGDCGL
CEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCC
SRKKRKGKTDSIAATLILTSFLEHSPRLPS
CCHHHCCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SNPQVAKVFLGVDYGERRIGLAYAAYPLGISLPIGFIATGKTLEATAKLLVGIIQERRV
CCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCC
STVVLGNPLPMQKGQKSALQEDILKLSSLLQESCPVEVILWDERLSSAQAERMLKGDCGL
CEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCC
SRKKRKGKTDSIAATLILTSFLEHSPRLPS
CCHHHCCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA