Definition | Tropheryma whipplei TW08/27, complete genome. |
---|---|
Accession | NC_004551 |
Length | 925,938 |
Click here to switch to the map view.
The map label for this gene is ftsW [H]
Identifier: 28572927
GI number: 28572927
Start: 889664
End: 891010
Strand: Direct
Name: ftsW [H]
Synonym: TW786
Alternate gene names: 28572927
Gene position: 889664-891010 (Clockwise)
Preceding gene: 28572926
Following gene: 28572928
Centisome position: 96.08
GC content: 45.14
Gene sequence:
>1347_bases ATGTATAGGCTTTATTTGGGTATGTCAAAACTAATACGTCAAAGACGAAATATCGAGCTGGCCCTGATAATAATCGTCAT TCTCATCGGTAATGCATGTCTGGTACTGGTTGAGCTTGGGGTGTCGGAAAGCCTGCACGCTAATGTGTTTATCTTCGCGG GGATTTTTTACTGCGCAGCCATAATCATGCACACCGTGATCCGATTCTACGCCGCAAATGCAGAACCTTTTATCTTTCCA ATCGCATTGTTGCTAAACAGCCTCGGAATCGCAGAGATATACCGAATTGATATTGAGAATAAAACCTCTTACGGCACTAA GCAAATTATCTGGTCAATACTTAGTCTCCTGGTCGCATCGGTGGTTATTGTTACCATACGGAATTATCGAGTTCTGCAGC GCTATACATATTTACTGGGGCTTGTGTCATGCGCATTGCTTTTGCTGCCAATCCTGCCGGGGATTGGCGAATCTGTCAGC GGTGCAAGAATATGGATAAAGCTTGGCGGTCTTTCGTTCCAGCCGGGCGAATTGGTAAAGATCACTTTGGCAATCTTTTT TGCAAGCTATCTGTATTCACATCGCGAGACTTTGATTGCAAAACAATCAGCCAAAATCTTTCTGTCCAAAATACGCAATT TTGCGCCAATTTTTTCCGTATGGATTCTGTGTGTTCTGATTATCGCAGTCCAGCGAGACCTTGGGACGGGGGTCCTTTAC TTCGCATTGTTTATTATCCTGACATATCTGGCCCTTTCCAGGATGCGGCTATTAATCATTGGCGGCGTAATGTTGCTTGC TGGAACATTTTTTGCGGCGAGAATTATGACCTATGTTGGATATCGCATTGATGTTTGGCTCAATGCGTTTGATCAGTCTG TATTCGAACGCGCCTTTGGTGGAAGCTACCAGCTCGTACAAGGAATATTCGGGATGGCTTTCGGTGGATTACTTGGCACA GGTCTCGGGCGAGGCTATCCAAGCATAACCCCGTTACCACAAAGCGACTACATATTGGCTAGCCTGGGTGAGGAGCTTGG ATTAGCCGGTTTTAGCCTAATAATGATTATGTATATGACAATTTTTTTTCAAGCTATAAAAGTAGCTCTGGAGGCAAATG ATGAATTTGCAAAGCTCCTCACCGCGGGTTTAGGGTGCATCATAGCTGTACAAGTGTTTATAGTCGCCGGCGGAATAACA CGCGTTATTCCGCTTACGGGACTTACCGCGCCATTCTTAGCATCGGGAGGGTCAAGCTTATTCGTGAACTGGATAATTGT TAGCCTGATTATCCGTATATCCGATAACCTGCGCAACTCTCCCGCGTTGAATGAATGGAAGACATGA
Upstream 100 bases:
>100_bases TGAAACAAGATTTTACGCGCCTATTCTCACCCAATGGAGTCCGCATTCGGGGCATTGATTCGTGTGGAATTTCAAGCTCG CATAGAGCACTCAACAGAGT
Downstream 100 bases:
>100_bases AGGTCCAGATACAACAACCCTGGCGGCATAGGTAGTAACAATATGTCCAACATGCTATCGGTCAAACATGTAGACAAAAA AAACCGTGACGGGCGCGCAA
Product: FtsW/RodA/SpoVE family cell cycle protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MYRLYLGMSKLIRQRRNIELALIIIVILIGNACLVLVELGVSESLHANVFIFAGIFYCAAIIMHTVIRFYAANAEPFIFP IALLLNSLGIAEIYRIDIENKTSYGTKQIIWSILSLLVASVVIVTIRNYRVLQRYTYLLGLVSCALLLLPILPGIGESVS GARIWIKLGGLSFQPGELVKITLAIFFASYLYSHRETLIAKQSAKIFLSKIRNFAPIFSVWILCVLIIAVQRDLGTGVLY FALFIILTYLALSRMRLLIIGGVMLLAGTFFAARIMTYVGYRIDVWLNAFDQSVFERAFGGSYQLVQGIFGMAFGGLLGT GLGRGYPSITPLPQSDYILASLGEELGLAGFSLIMIMYMTIFFQAIKVALEANDEFAKLLTAGLGCIIAVQVFIVAGGIT RVIPLTGLTAPFLASGGSSLFVNWIIVSLIIRISDNLRNSPALNEWKT
Sequences:
>Translated_448_residues MYRLYLGMSKLIRQRRNIELALIIIVILIGNACLVLVELGVSESLHANVFIFAGIFYCAAIIMHTVIRFYAANAEPFIFP IALLLNSLGIAEIYRIDIENKTSYGTKQIIWSILSLLVASVVIVTIRNYRVLQRYTYLLGLVSCALLLLPILPGIGESVS GARIWIKLGGLSFQPGELVKITLAIFFASYLYSHRETLIAKQSAKIFLSKIRNFAPIFSVWILCVLIIAVQRDLGTGVLY FALFIILTYLALSRMRLLIIGGVMLLAGTFFAARIMTYVGYRIDVWLNAFDQSVFERAFGGSYQLVQGIFGMAFGGLLGT GLGRGYPSITPLPQSDYILASLGEELGLAGFSLIMIMYMTIFFQAIKVALEANDEFAKLLTAGLGCIIAVQVFIVAGGIT RVIPLTGLTAPFLASGGSSLFVNWIIVSLIIRISDNLRNSPALNEWKT >Mature_448_residues MYRLYLGMSKLIRQRRNIELALIIIVILIGNACLVLVELGVSESLHANVFIFAGIFYCAAIIMHTVIRFYAANAEPFIFP IALLLNSLGIAEIYRIDIENKTSYGTKQIIWSILSLLVASVVIVTIRNYRVLQRYTYLLGLVSCALLLLPILPGIGESVS GARIWIKLGGLSFQPGELVKITLAIFFASYLYSHRETLIAKQSAKIFLSKIRNFAPIFSVWILCVLIIAVQRDLGTGVLY FALFIILTYLALSRMRLLIIGGVMLLAGTFFAARIMTYVGYRIDVWLNAFDQSVFERAFGGSYQLVQGIFGMAFGGLLGT GLGRGYPSITPLPQSDYILASLGEELGLAGFSLIMIMYMTIFFQAIKVALEANDEFAKLLTAGLGCIIAVQVFIVAGGIT RVIPLTGLTAPFLASGGSSLFVNWIIVSLIIRISDNLRNSPALNEWKT
Specific function: This is a septum-peptidoglycan biosynthetic protein, involved in cell wall formation. Plays a role in the stabilization of the ftsZ ring during cell division [H]
COG id: COG0772
COG function: function code D; Bacterial cell division membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ftsW/rodA/spoVE family [H]
Homologues:
Organism=Escherichia coli, GI1786277, Length=345, Percent_Identity=28.695652173913, Blast_Score=115, Evalue=5e-27, Organism=Escherichia coli, GI1786853, Length=317, Percent_Identity=26.813880126183, Blast_Score=77, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001182 - InterPro: IPR018365 [H]
Pfam domain/function: PF01098 FTSW_RODA_SPOVE [H]
EC number: NA
Molecular weight: Translated: 49319; Mature: 49319
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRLYLGMSKLIRQRRNIELALIIIVILIGNACLVLVELGVSESLHANVFIFAGIFYCAA CEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH IIMHTVIRFYAANAEPFIFPIALLLNSLGIAEIYRIDIENKTSYGTKQIIWSILSLLVAS HHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHEEEEECCCCCCCCHHHHHHHHHHHHHHH VVIVTIRNYRVLQRYTYLLGLVSCALLLLPILPGIGESVSGARIWIKLGGLSFQPGELVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHH ITLAIFFASYLYSHRETLIAKQSAKIFLSKIRNFAPIFSVWILCVLIIAVQRDLGTGVLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH FALFIILTYLALSRMRLLIIGGVMLLAGTFFAARIMTYVGYRIDVWLNAFDQSVFERAFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCC GSYQLVQGIFGMAFGGLLGTGLGRGYPSITPLPQSDYILASLGEELGLAGFSLIMIMYMT CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHH IFFQAIKVALEANDEFAKLLTAGLGCIIAVQVFIVAGGITRVIPLTGLTAPFLASGGSSL HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHCCCCHH FVNWIIVSLIIRISDNLRNSPALNEWKT HHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MYRLYLGMSKLIRQRRNIELALIIIVILIGNACLVLVELGVSESLHANVFIFAGIFYCAA CEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH IIMHTVIRFYAANAEPFIFPIALLLNSLGIAEIYRIDIENKTSYGTKQIIWSILSLLVAS HHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHEEEEECCCCCCCCHHHHHHHHHHHHHHH VVIVTIRNYRVLQRYTYLLGLVSCALLLLPILPGIGESVSGARIWIKLGGLSFQPGELVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHH ITLAIFFASYLYSHRETLIAKQSAKIFLSKIRNFAPIFSVWILCVLIIAVQRDLGTGVLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH FALFIILTYLALSRMRLLIIGGVMLLAGTFFAARIMTYVGYRIDVWLNAFDQSVFERAFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCC GSYQLVQGIFGMAFGGLLGTGLGRGYPSITPLPQSDYILASLGEELGLAGFSLIMIMYMT CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHH IFFQAIKVALEANDEFAKLLTAGLGCIIAVQVFIVAGGITRVIPLTGLTAPFLASGGSSL HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHCCCCHH FVNWIIVSLIIRISDNLRNSPALNEWKT HHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]