Definition Tropheryma whipplei TW08/27, complete genome.
Accession NC_004551
Length 925,938

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The map label for this gene is 28572926

Identifier: 28572926

GI number: 28572926

Start: 889052

End: 889501

Strand: Direct

Name: 28572926

Synonym: TW785

Alternate gene names: NA

Gene position: 889052-889501 (Clockwise)

Preceding gene: 28572925

Following gene: 28572927

Centisome position: 96.02

GC content: 45.56

Gene sequence:

>450_bases
ATGAACGAGTTTATATTTTTTACACTAAAAGTCGGATTTTTGGGGCTTCTGTGGATCTTTGTTTTGTGCTCAATTGTTAT
TTTGTACAAAAGCCTGCCGAAGGGGAGGGATAATCTCGCGACACCCCGGATAAGCAGTAAGAAATTTTCCCCAAGCGTTG
GGGCAAAAATGGTGACTGTCAAAACGGAATGCTCGGAACAAAAGATACCAATCAAGCAACCGAGGATGCTAATTGGTAGA
ACCCCTGACTGTCAAATAGCTCTGTCTGATCGTTTCTCTTCTGGGCACCACGCAGAATTAGTTCTCACGGAATCTGGATG
GAAAGTTCGCGACCTTGGTTCCAGTAACGGGACATTTGTTGACGGGAAGCGAATTCCATCAGGGCAGGCAATTACCCTGA
GGATTGGTGAGGAGCTTAAAATCGGTAGCAGCGCTATCAGATTGTCCTGA

Upstream 100 bases:

>100_bases
CTGGAGATCTGCGCTACGAAATTTAGGTATTAAACAACAAATAAACATGGGGTTCGTGCCAGGTCACATGCTATGGCATG
CTGGGCATCTGGTTTAGATA

Downstream 100 bases:

>100_bases
ACGGGTCTATGCGTGCTCTAATCACGACAATGCAATATAAGTCAGCGCGTGCAGGCTGTATGTGAAACAAGATTTTACGC
GCCTATTCTCACCCAATGGA

Product: secreted protein

Products: NA

Alternate protein names: FHA Domain Containing Protein; Forkhead-Associated Protein; Protein Containing Forkhead-Associated Domain; Secreted Protein

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MNEFIFFTLKVGFLGLLWIFVLCSIVILYKSLPKGRDNLATPRISSKKFSPSVGAKMVTVKTECSEQKIPIKQPRMLIGR
TPDCQIALSDRFSSGHHAELVLTESGWKVRDLGSSNGTFVDGKRIPSGQAITLRIGEELKIGSSAIRLS

Sequences:

>Translated_149_residues
MNEFIFFTLKVGFLGLLWIFVLCSIVILYKSLPKGRDNLATPRISSKKFSPSVGAKMVTVKTECSEQKIPIKQPRMLIGR
TPDCQIALSDRFSSGHHAELVLTESGWKVRDLGSSNGTFVDGKRIPSGQAITLRIGEELKIGSSAIRLS
>Mature_149_residues
MNEFIFFTLKVGFLGLLWIFVLCSIVILYKSLPKGRDNLATPRISSKKFSPSVGAKMVTVKTECSEQKIPIKQPRMLIGR
TPDCQIALSDRFSSGHHAELVLTESGWKVRDLGSSNGTFVDGKRIPSGQAITLRIGEELKIGSSAIRLS

Specific function: Unknown

COG id: COG1716

COG function: function code T; FOG: FHA domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16410; Mature: 16410

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: PS50006 FHA_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEFIFFTLKVGFLGLLWIFVLCSIVILYKSLPKGRDNLATPRISSKKFSPSVGAKMVTV
CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
KTECSEQKIPIKQPRMLIGRTPDCQIALSDRFSSGHHAELVLTESGWKVRDLGSSNGTFV
ECCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCEEEEEECCCCEEEECCCCCCCEE
DGKRIPSGQAITLRIGEELKIGSSAIRLS
ECCCCCCCCEEEEEECCCEEECCEEEECC
>Mature Secondary Structure
MNEFIFFTLKVGFLGLLWIFVLCSIVILYKSLPKGRDNLATPRISSKKFSPSVGAKMVTV
CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
KTECSEQKIPIKQPRMLIGRTPDCQIALSDRFSSGHHAELVLTESGWKVRDLGSSNGTFV
ECCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCEEEEEECCCCEEEECCCCCCCEE
DGKRIPSGQAITLRIGEELKIGSSAIRLS
ECCCCCCCCEEEEEECCCEEECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA