Definition | Tropheryma whipplei TW08/27, complete genome. |
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Accession | NC_004551 |
Length | 925,938 |
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The map label for this gene is 28572408
Identifier: 28572408
GI number: 28572408
Start: 277348
End: 277875
Strand: Direct
Name: 28572408
Synonym: TW249
Alternate gene names: NA
Gene position: 277348-277875 (Clockwise)
Preceding gene: 28572407
Following gene: 28572409
Centisome position: 29.95
GC content: 53.6
Gene sequence:
>528_bases ATGGTTTTGTCTCCCAGCGACATCGTGAACAAGAGGTTCGGGGTGACCAAGTTCAGGGAGGGATATGACCAGGATGAGGT TGATGATTATCTCGATGAGGTTGCTGTCGATCTTCGTCATTTGCTTGAGAGAAATGACGAACTATCGTCTGAGCTGGAGA GTGCCAGGGGGCAAATCCAAGCCCTAAAGGATGAGCTGGCCGAGGCTTCTCGCGGTGCCTCTGGTGGCTCGTTTGGTGAT CAGGCTGCAGAGATTCTTGCTCTCGCAAAGCGTGCCCGTGATGAGTATATACAGGAGGGTGTTAAGAGGCGGGATGCTAT TGTTGCCGAGGCCCGTGAATCCGCTGAACGTGCTGCTCGCACATCTGAGAGTGAACTCACCAGGCGGGTTGAGGCTCTCA AACTCGAGATACCTGCCCTCGAGAAGCGTGTTCTTGATTTGCGTGCTTTCGAGAGTGACTATAGGGACAGGTTGCGTGCT TTTTTGCAGAGCGGGCTGCGTGACCTAGAGCCTAAGAACCCCTCTTGA
Upstream 100 bases:
>100_bases CAAGAAGGAGGAGTAAACTTCTCTATTCTGGTTTTTTGAGCAGTTCTTGTTTTGGTATACTGGCTCGGAAGATCAGAAGT TTTTGAGGATCGGGCTCCAC
Downstream 100 bases:
>100_bases CGACTAGAACCCTGCGGTTCTACGCTCTGGTGGGTTTTTTAGTTTTTCTGGATCAGGTTACCAAGTATCTTGCGCATGCT TATCTTGCGCGCGATTTTAT
Product: cell division protein
Products: NA
Alternate protein names: DivIVA Protein; DivIVA Domain Protein; Initiation Protein; Protein DivIVA-Like Protein; Protein DivIVA Family; Antigen
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MVLSPSDIVNKRFGVTKFREGYDQDEVDDYLDEVAVDLRHLLERNDELSSELESARGQIQALKDELAEASRGASGGSFGD QAAEILALAKRARDEYIQEGVKRRDAIVAEARESAERAARTSESELTRRVEALKLEIPALEKRVLDLRAFESDYRDRLRA FLQSGLRDLEPKNPS
Sequences:
>Translated_175_residues MVLSPSDIVNKRFGVTKFREGYDQDEVDDYLDEVAVDLRHLLERNDELSSELESARGQIQALKDELAEASRGASGGSFGD QAAEILALAKRARDEYIQEGVKRRDAIVAEARESAERAARTSESELTRRVEALKLEIPALEKRVLDLRAFESDYRDRLRA FLQSGLRDLEPKNPS >Mature_175_residues MVLSPSDIVNKRFGVTKFREGYDQDEVDDYLDEVAVDLRHLLERNDELSSELESARGQIQALKDELAEASRGASGGSFGD QAAEILALAKRARDEYIQEGVKRRDAIVAEARESAERAARTSESELTRRVEALKLEIPALEKRVLDLRAFESDYRDRLRA FLQSGLRDLEPKNPS
Specific function: Unknown
COG id: COG3599
COG function: function code D; Cell division initiation protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19737; Mature: 19737
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLSPSDIVNKRFGVTKFREGYDQDEVDDYLDEVAVDLRHLLERNDELSSELESARGQIQ CCCCCHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ALKDELAEASRGASGGSFGDQAAEILALAKRARDEYIQEGVKRRDAIVAEARESAERAAR HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSESELTRRVEALKLEIPALEKRVLDLRAFESDYRDRLRAFLQSGLRDLEPKNPS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MVLSPSDIVNKRFGVTKFREGYDQDEVDDYLDEVAVDLRHLLERNDELSSELESARGQIQ CCCCCHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ALKDELAEASRGASGGSFGDQAAEILALAKRARDEYIQEGVKRRDAIVAEARESAERAAR HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSESELTRRVEALKLEIPALEKRVLDLRAFESDYRDRLRAFLQSGLRDLEPKNPS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA