Click here to switch to the map view.

The map label for this gene is sepF

Identifier: 28572407

GI number: 28572407

Start: 276892

End: 277263

Strand: Direct

Name: sepF

Synonym: TW248

Alternate gene names: 28572407

Gene position: 276892-277263 (Clockwise)

Preceding gene: 28572406

Following gene: 28572408

Centisome position: 29.9

GC content: 47.04

Gene sequence:

>372_bases
ATGGCGGGTGGTTTGAAAAAGGCAATGGTTTATCTTGGTTTGGCTGAAGATAATCAAGAGCTGCACAGCGCGCCTAGCGG
TATGTCGCATCTGAGGCGCGTTCCTCACCCCAAGCAGCAAATGAGCGAGATATTCACTTTTCATCCGAAGAAATATAGTG
AAGTTTCGGGCATTGTTGAGCGTTTTCGTCAGAACATACCCGTGATAATCGATATGTCTCAGCTATCTGATACCGATGCA
CGCAGGATGATTGATTTTGCCAGTGGACTTTCGCAGGGCCTTGTCGGAAAGATTGAGCGCGTAGTTGGTAAGGTTTTTCT
CCTATCTCCGGAGCATATTTCCATAAGCACCGAATCCAAGAAGGAGGAGTAA

Upstream 100 bases:

>100_bases
GATTTTTAGCAAGATTGCACACTGAGGCTTGGGTTTAAGGTTAGGATATTCCCTGGCGTAACAAGGCTGCGTCGTAGTAA
CAGATAGAAAGGGGCATGCG

Downstream 100 bases:

>100_bases
ACTTCTCTATTCTGGTTTTTTGAGCAGTTCTTGTTTTGGTATACTGGCTCGGAAGATCAGAAGTTTTTGAGGATCGGGCT
CCACATGGTTTTGTCTCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MAGGLKKAMVYLGLAEDNQELHSAPSGMSHLRRVPHPKQQMSEIFTFHPKKYSEVSGIVERFRQNIPVIIDMSQLSDTDA
RRMIDFASGLSQGLVGKIERVVGKVFLLSPEHISISTESKKEE

Sequences:

>Translated_123_residues
MAGGLKKAMVYLGLAEDNQELHSAPSGMSHLRRVPHPKQQMSEIFTFHPKKYSEVSGIVERFRQNIPVIIDMSQLSDTDA
RRMIDFASGLSQGLVGKIERVVGKVFLLSPEHISISTESKKEE
>Mature_122_residues
AGGLKKAMVYLGLAEDNQELHSAPSGMSHLRRVPHPKQQMSEIFTFHPKKYSEVSGIVERFRQNIPVIIDMSQLSDTDAR
RMIDFASGLSQGLVGKIERVVGKVFLLSPEHISISTESKKEE

Specific function: Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of ftsZ protofilaments. Its function overlaps with ftsA

COG id: COG1799

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm. Note=Localizes to the division site, in a ftsZ-dependent manner (By similarity)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sepF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SEPF_TROW8 (Q83I43)

Other databases:

- EMBL:   BX251410
- RefSeq:   NP_789187.1
- STRING:   Q83I43
- GeneID:   1064539
- GenomeReviews:   BX072543_GR
- KEGG:   tws:TW248
- eggNOG:   COG1799
- HOGENOM:   HBG700081
- OMA:   YNDARVI
- ProtClustDB:   CLSK537042
- BioCyc:   TWHI218496:TW0232-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01197
- InterPro:   IPR023052
- InterPro:   IPR007561

Pfam domain/function: PF04472 DUF552

EC number: NA

Molecular weight: Translated: 13751; Mature: 13620

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGGLKKAMVYLGLAEDNQELHSAPSGMSHLRRVPHPKQQMSEIFTFHPKKYSEVSGIVE
CCCHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHH
RFRQNIPVIIDMSQLSDTDARRMIDFASGLSQGLVGKIERVVGKVFLLSPEHISISTESK
HHHCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEECCCCC
KEE
CCC
>Mature Secondary Structure 
AGGLKKAMVYLGLAEDNQELHSAPSGMSHLRRVPHPKQQMSEIFTFHPKKYSEVSGIVE
CCHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHH
RFRQNIPVIIDMSQLSDTDARRMIDFASGLSQGLVGKIERVVGKVFLLSPEHISISTESK
HHHCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEECCCCC
KEE
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12606174