| Definition | Brucella suis 1330 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004310 |
| Length | 2,107,794 |
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The map label for this gene is thrS [H]
Identifier: 23501949
GI number: 23501949
Start: 1041027
End: 1043003
Strand: Reverse
Name: thrS [H]
Synonym: BR1071
Alternate gene names: 23501949
Gene position: 1043003-1041027 (Counterclockwise)
Preceding gene: 23501950
Following gene: 23501947
Centisome position: 49.48
GC content: 56.55
Gene sequence:
>1977_bases ATGTCGAATACCGTTTCCCTGCAATTTCCCGATGGTTCCGTACGTGAATACGATGCATCGATGACAGGGGCCGCCCTTGC GGAATCAATTTCCAAGTCGCTTGCCAAGAAGGCTGTCGCTTACGCTGTTGATGGCACGGTTCGTGATCTTTCCGATCCGC TTGGCGCTTCCGGCAAGGTGGAAATCATCACCCGCGAAGACCCGCGCGCGCTGGAACTCATCCGCCACGACACTGCCCAT GTGCTTGCAGAAGCCGTGCAGGAGCTTTTTCCCGGAACGCAGGTAACGATCGGCCCCGTGATCGAAAACGGCTTCTATTA CGACTTTGCGCGCAACGAGCCGTTTACGCTCGATGACCTGCCGGTGATCGAAAAGAAGATGCGCGAGATCATTCAGCGCA ACAAGCCGTTCACCAAGGAAGTCTGGTCACGCGAGAAGGCCAAACAGGTTTTTTCCGACAAGGGCGAAAGCTACAAGGTC GAGCTGGTCGATGCCATTCCGGCCGGGCAGGACCTCAAGATCTATTATCAGGGTGACTGGTTCGACCTTTGCCGCGGGCC GCATATGGCTTCCACGGGTCAGATCGGCAATTCATTCAAGTTGATGAAGGTGGCGGGCGCTTATTGGCGCGGCGATGCCA ATAATCCGATGCTGACCCGCATCTACGGCACCGCCTTTGCAAACGATAATGACCTTCAAGCCTATCTCCATATGCTTGAG GAAGCGGAGAAGCGCGACCACCGCCGCCTTGGCCGCGAAATGGACCTGTTCCATTTCCAGGAAGAGGGGCCGGGCGTCGT GTTCTGGCACGCCAAAGGCTGGAAGATGTTCCAGAATCTGGTGAGCTATATGCGCCGCCGCCTCGACAGCCATGGCTATC AGGAAGTGAATGCGCCGCAGGTGCTGGACAAGTCGCTGTGGGAAACCTCCGGCCACTGGGGCTGGTATCGCGACAATATG TTCAAGGTTACGGTTGCCGGTGACGATACCGACGATGACCGTGTCTTTGCGCTGAAGCCGATGAACTGCCCCGGCCATGT GCAGATATTCAAGCATGGCCTTAAATCATACCGCGATCTTCCTATAAAGCTTGCGGAATTCGGCAATGTGCACCGCTATG AGCCTTCCGGTGCGCTGCACGGGCTGATGCGTGTGCGCGGTTTCACGCAGGACGATGCGCATATTTTCTGCACCGAAGAG CAGATGGCGGCGGAATGCCTGCGCATCAATGATCTTATCTTGTCGGTCTATAAGGATTTCGGCTTCGAGGAAATCACCAT CAAGCTCTCGACGCGCCCGGAAAAGCGCGTTGGCTCGGATGAGCTTTGGGATCGTGCCGAAAGCGTGATGATGACCGTTC TGGAGCAGATCCGGCAGCAGTCGAACAATATCAAGACCGGCATTCTGCCGGGCGAGGGTGCGTTCTACGGGCCGAAGTTT GAATATACGCTGAAGGACGCCATCGGCCGTGAATGGCAGTGCGGCACCACGCAGGTCGATTTCAACCTGCCGGAACGCTT CGGCGCCTTCTATATCGGCGCGGATTCGGAAAAGAAGCAGCCGGTCATGATCCATCGCGCCATCTGCGGCTCGATGGAAC GTTTCCTCGGCATTCTGATCGAGAATTTTGCCGGTCACATGCCGCTCTGGTTTGCGCCGGTACAGGTGGTTGTTGCAACC ATCACGTCGGATGCCGATGAATATGCAAAGGAAGCGGCTGCGAAGCTCAAGGCTGCCGGTCTTCAGGTCGTGACCGATCT GCGCAACGAGAAGATCAACTACAAGGTTCGCGAACATTCGCTCCAGAAAGTTCCGGTCATCCTCGTTTGCGGCAAGCGTG AAGCAGAAGAAAAGACTGTCAACATGCGCCGTCTCGGCTCACGCGATCAGGAATCCATGACGCTGGATGAAGCGATTGCC CGGCTTTGCGAAGAGGCGACCCCGCCCGATCTGCTTCGCCTGAAAAATGCAGGCTGA
Upstream 100 bases:
>100_bases CTTTACTGCCTATGCAAAAGGGAATATGAGCCAAACTCATTTTCTATGCATGAGACGAACCACCCGCAATCGTTGGCGGG ACTGGATAAGGATGATGACA
Downstream 100 bases:
>100_bases TAAAAAGATACGTAAAAAGGCCGCGCGATGCGGCCTTTTTATTGCTCTATTGGATCAGTCGACAATGTCATCGGAGGCTT CCGAATCGCTGTTGGCAAGA
Product: threonyl-tRNA synthetase
Products: NA
Alternate protein names: Threonine--tRNA ligase; ThrRS [H]
Number of amino acids: Translated: 658; Mature: 657
Protein sequence:
>658_residues MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKVEIITREDPRALELIRHDTAH VLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDLPVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKV ELVDAIPAGQDLKIYYQGDWFDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNAPQVLDKSLWETSGHWGWYRDNM FKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEE QMAAECLRINDLILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQSNNIKTGILPGEGAFYGPKF EYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPVQVVVAT ITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREHSLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIA RLCEEATPPDLLRLKNAG
Sequences:
>Translated_658_residues MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKVEIITREDPRALELIRHDTAH VLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDLPVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKV ELVDAIPAGQDLKIYYQGDWFDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNAPQVLDKSLWETSGHWGWYRDNM FKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEE QMAAECLRINDLILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQSNNIKTGILPGEGAFYGPKF EYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPVQVVVAT ITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREHSLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIA RLCEEATPPDLLRLKNAG >Mature_657_residues SNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKVEIITREDPRALELIRHDTAHV LAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDLPVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVE LVDAIPAGQDLKIYYQGDWFDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLEE AEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNAPQVLDKSLWETSGHWGWYRDNMF KVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQ MAAECLRINDLILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQSNNIKTGILPGEGAFYGPKFE YTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPVQVVVATI TSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREHSLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIAR LCEEATPPDLLRLKNAG
Specific function: Thrs Is Also A Translational Repressor Protein, It Controls The Translation Of Its Own Gene By Binding To Its mRNA. [C]
COG id: COG0441
COG function: function code J; Threonyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI38202255, Length=647, Percent_Identity=38.6398763523957, Blast_Score=444, Evalue=1e-124, Organism=Homo sapiens, GI20070344, Length=661, Percent_Identity=38.7291981845688, Blast_Score=442, Evalue=1e-124, Organism=Homo sapiens, GI38570111, Length=645, Percent_Identity=37.0542635658915, Blast_Score=438, Evalue=1e-123, Organism=Escherichia coli, GI1788013, Length=653, Percent_Identity=50.8422664624809, Blast_Score=690, Evalue=0.0, Organism=Caenorhabditis elegans, GI71984192, Length=645, Percent_Identity=37.8294573643411, Blast_Score=456, Evalue=1e-128, Organism=Caenorhabditis elegans, GI71984184, Length=645, Percent_Identity=37.8294573643411, Blast_Score=456, Evalue=1e-128, Organism=Saccharomyces cerevisiae, GI6322112, Length=662, Percent_Identity=38.0664652567976, Blast_Score=441, Evalue=1e-124, Organism=Saccharomyces cerevisiae, GI6322654, Length=423, Percent_Identity=34.2789598108747, Blast_Score=260, Evalue=4e-70, Organism=Drosophila melanogaster, GI24583842, Length=643, Percent_Identity=37.4805598755832, Blast_Score=442, Evalue=1e-124, Organism=Drosophila melanogaster, GI28574141, Length=643, Percent_Identity=37.4805598755832, Blast_Score=442, Evalue=1e-124, Organism=Drosophila melanogaster, GI24583839, Length=643, Percent_Identity=37.4805598755832, Blast_Score=442, Evalue=1e-124,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002314 - InterPro: IPR006195 - InterPro: IPR004154 - InterPro: IPR012675 - InterPro: IPR012676 - InterPro: IPR002320 - InterPro: IPR018163 - InterPro: IPR012947 [H]
Pfam domain/function: PF03129 HGTP_anticodon; PF00587 tRNA-synt_2b; PF07973 tRNA_SAD [H]
EC number: =6.1.1.3 [H]
Molecular weight: Translated: 74579; Mature: 74447
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: PS50862 AA_TRNA_LIGASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV CCCEEEEECCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEE EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL EEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEECCCCCCCCCCC PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEECCCH FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE HHHHCCCCCCCCCCCCCCEEEEEECCHHCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHH EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNAPQ HHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHH VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL HHHHHHHHCCCCCCEEECCEEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCC PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRINDLILSVYKDF CEEEHHCCCCEEECCCHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHC GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQSNNIKTGILPGEGAFYGPKF CCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCE EYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGILI EEEHHHHCCCCCCCCCEEEECCCHHHHCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH ENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREHS HHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHCC LQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPDLLRLKNAG CCCCCEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCC >Mature Secondary Structure SNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV CCEEEEECCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEE EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL EEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEECCCCCCCCCCC PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEECCCH FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE HHHHCCCCCCCCCCCCCCEEEEEECCHHCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHH EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNAPQ HHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHH VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL HHHHHHHHCCCCCCEEECCEEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCC PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRINDLILSVYKDF CEEEHHCCCCEEECCCHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHC GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQSNNIKTGILPGEGAFYGPKF CCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCE EYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGILI EEEHHHHCCCCCCCCCEEEECCCHHHHCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH ENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREHS HHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHCC LQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPDLLRLKNAG CCCCCEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA