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The map label for this gene is ydjA [H]

Identifier: 23501947

GI number: 23501947

Start: 1039158

End: 1039742

Strand: Reverse

Name: ydjA [H]

Synonym: BR1069

Alternate gene names: 23501947

Gene position: 1039742-1039158 (Counterclockwise)

Preceding gene: 23501949

Following gene: 23501946

Centisome position: 49.33

GC content: 58.29

Gene sequence:

>585_bases
GTGTCACATCCGGTTTTCGATTTTCTTGCGCAGCGTAGCTCAACCCCTATTTCCGCCATTTGTGAACCGGCGCCAGAAGG
CGAAGAACTGGCCGCGCTTTTAAAGGTTGCAGCGCGCGTACCGGATCACGGACGCCTCACACCCTGGCGCTTCATTCTCT
ATCGCGGTGATACACGCAGGCAGGTTGGCGAATATCTCGTAAAGCGAGCGGAAGAGCGGGAAGGGCCGCTTTCCGATGCG
CAGAAAGACAAGGAAGCCACGCGGTTTTCCCGCGCGCCGCTTGTTGTCGGTGTCATTTTTTCCCCCGTTGCGCATGAGCG
AATCCCCGAATGGGAGCAGTTCCTTTCTGCCGGTGCGGTTGCGATGAACCTTTGCATCGCGGCCAATGCGCTGGGCTATG
CGACCAACTGGATCAGCAACTGGTATGCGGAAGATGCACCGGCGCGGGCATTTCTGGGGCTTGCGCCGCATGAGCGCGTT
GCCGGTTTTGTCCATATCGGAACCGCTGAAAATAAAATGCCGGAGCGCCCGCGCGCGGACATGGAAAAGATCGTTTCGGA
CTATTCCGGCCCGTGGGTAGAATAG

Upstream 100 bases:

>100_bases
GGGTGAGAAGAGGCAGCTTCGATGAGCGCGCGTTTCGGTCGTAAAGAATGATATCGGCGTTGTTTATTGTTATGATGGCA
ATTTTAGAAAGAGGGCACCT

Downstream 100 bases:

>100_bases
AAGAAGCTTGCGTGAAGCGCGCTGACTTGTACGGAAAAGACGATGTTTTATGAACCGAAAGACGGAACGGGCCTGCCGCA
TAATCCGTTCAAGGCGATTG

Product: nitroreductase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MSHPVFDFLAQRSSTPISAICEPAPEGEELAALLKVAARVPDHGRLTPWRFILYRGDTRRQVGEYLVKRAEEREGPLSDA
QKDKEATRFSRAPLVVGVIFSPVAHERIPEWEQFLSAGAVAMNLCIAANALGYATNWISNWYAEDAPARAFLGLAPHERV
AGFVHIGTAENKMPERPRADMEKIVSDYSGPWVE

Sequences:

>Translated_194_residues
MSHPVFDFLAQRSSTPISAICEPAPEGEELAALLKVAARVPDHGRLTPWRFILYRGDTRRQVGEYLVKRAEEREGPLSDA
QKDKEATRFSRAPLVVGVIFSPVAHERIPEWEQFLSAGAVAMNLCIAANALGYATNWISNWYAEDAPARAFLGLAPHERV
AGFVHIGTAENKMPERPRADMEKIVSDYSGPWVE
>Mature_193_residues
SHPVFDFLAQRSSTPISAICEPAPEGEELAALLKVAARVPDHGRLTPWRFILYRGDTRRQVGEYLVKRAEEREGPLSDAQ
KDKEATRFSRAPLVVGVIFSPVAHERIPEWEQFLSAGAVAMNLCIAANALGYATNWISNWYAEDAPARAFLGLAPHERVA
GFVHIGTAENKMPERPRADMEKIVSDYSGPWVE

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=171, Percent_Identity=30.4093567251462, Blast_Score=92, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 21571; Mature: 21439

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHPVFDFLAQRSSTPISAICEPAPEGEELAALLKVAARVPDHGRLTPWRFILYRGDTRR
CCCHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHH
QVGEYLVKRAEEREGPLSDAQKDKEATRFSRAPLVVGVIFSPVAHERIPEWEQFLSAGAV
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
AMNLCIAANALGYATNWISNWYAEDAPARAFLGLAPHERVAGFVHIGTAENKMPERPRAD
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHCEEEEECCCCCCCCCCCHHH
MEKIVSDYSGPWVE
HHHHHHHCCCCCCC
>Mature Secondary Structure 
SHPVFDFLAQRSSTPISAICEPAPEGEELAALLKVAARVPDHGRLTPWRFILYRGDTRR
CCHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHH
QVGEYLVKRAEEREGPLSDAQKDKEATRFSRAPLVVGVIFSPVAHERIPEWEQFLSAGAV
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
AMNLCIAANALGYATNWISNWYAEDAPARAFLGLAPHERVAGFVHIGTAENKMPERPRAD
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHCEEEEECCCCCCCCCCCHHH
MEKIVSDYSGPWVE
HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]