| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22127662
Identifier: 22127662
GI number: 22127662
Start: 4211044
End: 4211766
Strand: Reverse
Name: 22127662
Synonym: y3791
Alternate gene names: NA
Gene position: 4211766-4211044 (Counterclockwise)
Preceding gene: 22127663
Following gene: 22127661
Centisome position: 91.55
GC content: 30.43
Gene sequence:
>723_bases ATGGTGTCTACGTCATTGAAATTTGGTGGGAAGATAATTGAGGAACTATCTCAAAAAATACCTTCATCACTCTTTGCTTT GAATGAATTGGTGAAGAATTCGTATGACGCATTCTCTCCAGATGTTACCATTACAGTAATTCCATCAGAGTTAAAGATAA TAATTTCCGATTACGGAAACGGTATGTCGGTAGACGAAATTCATTCTTTATTTCATATATCAAAAAGCACTAAAAAATAT GGTTGCGAAGTAAGTCAGAATGGAATAAAGAGAATTGTTCAAGGTTCAAAAGGACTGGGTTTTTTATCAGCCTTTAAGTT TGGTGATAAAGTTGAATGGAAAACATGTCAAAATGGTATATGTAGTGTTTTTTCTGTAAAAAAATCAGATTTAATATATA AAGATGACGTTTCTGGAATTAAGATTCCTATAACAACAGATTCTAGCAATAAGAATGGAACTGAGATTAGAATATTTACT AATCAACAAGATATGGATGAGTTACTATCTGACTTATCCGATGAAAAGATTGCGCGGAAATTAGCAGCATCAATGTTGGA TGAATCCTTTAATGTTAAAATTAAGATTGAAAATAAAGATAAGATAATATCAACAAGTAAATTGAAGTCATTTCTTTTTG AGTGTGAACAGAGTCAACTTTTTTATGTGAAATACAATTTTTCTAAAGAAGAGATTGAGTTTTTTCATAAGGGGGATAAA TAA
Upstream 100 bases:
>100_bases AGCATTGCTAATACGATGGATAAAGAATTGATTCTTATAATGAGGAAGTAATGCTATTTTGAATAACGTTATTTAATTTT TTGAGAGGGAGTTTTTATAT
Downstream 100 bases:
>100_bases AACACCTTTCCCTATAGATCGTACTGATTATAGTATTAACATCGAATTAATTATTTTCCTTTTTGATAAAGGAAAAAATA CGAAGTCTATATCTAATCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MVSTSLKFGGKIIEELSQKIPSSLFALNELVKNSYDAFSPDVTITVIPSELKIIISDYGNGMSVDEIHSLFHISKSTKKY GCEVSQNGIKRIVQGSKGLGFLSAFKFGDKVEWKTCQNGICSVFSVKKSDLIYKDDVSGIKIPITTDSSNKNGTEIRIFT NQQDMDELLSDLSDEKIARKLAASMLDESFNVKIKIENKDKIISTSKLKSFLFECEQSQLFYVKYNFSKEEIEFFHKGDK
Sequences:
>Translated_240_residues MVSTSLKFGGKIIEELSQKIPSSLFALNELVKNSYDAFSPDVTITVIPSELKIIISDYGNGMSVDEIHSLFHISKSTKKY GCEVSQNGIKRIVQGSKGLGFLSAFKFGDKVEWKTCQNGICSVFSVKKSDLIYKDDVSGIKIPITTDSSNKNGTEIRIFT NQQDMDELLSDLSDEKIARKLAASMLDESFNVKIKIENKDKIISTSKLKSFLFECEQSQLFYVKYNFSKEEIEFFHKGDK >Mature_240_residues MVSTSLKFGGKIIEELSQKIPSSLFALNELVKNSYDAFSPDVTITVIPSELKIIISDYGNGMSVDEIHSLFHISKSTKKY GCEVSQNGIKRIVQGSKGLGFLSAFKFGDKVEWKTCQNGICSVFSVKKSDLIYKDDVSGIKIPITTDSSNKNGTEIRIFT NQQDMDELLSDLSDEKIARKLAASMLDESFNVKIKIENKDKIISTSKLKSFLFECEQSQLFYVKYNFSKEEIEFFHKGDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26996; Mature: 26996
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSTSLKFGGKIIEELSQKIPSSLFALNELVKNSYDAFSPDVTITVIPSELKIIISDYGN CCCCCCHHCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCC GMSVDEIHSLFHISKSTKKYGCEVSQNGIKRIVQGSKGLGFLSAFKFGDKVEWKTCQNGI CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHCCH CSVFSVKKSDLIYKDDVSGIKIPITTDSSNKNGTEIRIFTNQQDMDELLSDLSDEKIARK HHHEEECCCCEEEECCCCCEEEEEEECCCCCCCCEEEEEECHHHHHHHHHHCCHHHHHHH LAASMLDESFNVKIKIENKDKIISTSKLKSFLFECEQSQLFYVKYNFSKEEIEFFHKGDK HHHHHHCCCCEEEEEECCCCCEEHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCC >Mature Secondary Structure MVSTSLKFGGKIIEELSQKIPSSLFALNELVKNSYDAFSPDVTITVIPSELKIIISDYGN CCCCCCHHCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCC GMSVDEIHSLFHISKSTKKYGCEVSQNGIKRIVQGSKGLGFLSAFKFGDKVEWKTCQNGI CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHCCH CSVFSVKKSDLIYKDDVSGIKIPITTDSSNKNGTEIRIFTNQQDMDELLSDLSDEKIARK HHHEEECCCCEEEECCCCCEEEEEEECCCCCCCCEEEEEECHHHHHHHHHHCCHHHHHHH LAASMLDESFNVKIKIENKDKIISTSKLKSFLFECEQSQLFYVKYNFSKEEIEFFHKGDK HHHHHHCCCCEEEEEECCCCCEEHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA