Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
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Accession | NC_004088 |
Length | 4,600,755 |
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The map label for this gene is 22127661
Identifier: 22127661
GI number: 22127661
Start: 4209699
End: 4211072
Strand: Reverse
Name: 22127661
Synonym: y3790
Alternate gene names: NA
Gene position: 4211072-4209699 (Counterclockwise)
Preceding gene: 22127662
Following gene: 22127658
Centisome position: 91.53
GC content: 30.35
Gene sequence:
>1374_bases TTGAGTTTTTTCATAAGGGGGATAAATAAAACACCTTTCCCTATAGATCGTACTGATTATAGTATTAACATCGAATTAAT TATTTTCCTTTTTGATAAAGGAAAAAATACGAAGTCTATATCTAATCTTTATAAAAGATTGCATGACAATGCGCTTTATC CTTTAGTGTATATTAATAATAATCTTTTCAATAATACGATTATATTTGATCCGGATTTACTTCGTAAAAAAAGCTCAGGA GCTTCTCTGCCTCAAATGATAGGCTATGTGTCAATTCAAAGTCAAAACAAAAATATTGAATTTAACTCAGATAGAACTTA CTTTGTAGACAATAGTATTACTAAAAATTTAGTTAATAGCCTTAAGAAATTAAATGAAACTATTCAGACTAAAGGTTCTG ATCTAAAAAATGAATTGAAGGTGGGCACACCCTCTTCATTAACTGGTAAGTCATACCCAACTGAAGATGTTACTAGCATA AGAAACAAGCCTGCATCAATATCCATTGATAGGAAAAAAACAATAAAATTTCATATTCCATCTGAACAAATTGATTTGAA TGAATATATTTATGCCGTAAAGGATAGTAGTGGGAATGATATAAACAAAAATGACGTCGTAACAAGTATTGAGGGTAGTG TCACTAATAGCCGAATATTAGAAGCAATAGAAGAACCGTGTGAGTTACGAGTGGTTTTTCGATATGAAGATAGTGTGACT GGTCTTGTTTCAGCTGATGTTTTTCTTTGTTTTGAGAAGAAGATTTCCAATATATCAGGAAGTAAAGAAGAAAAGTCATT GTTTACAATACAATCTGCATCTGGCTATACCGTTAATACTGGAACAGTATCGTCTATTATCTATGCTATAGATAAATTGT ACTCATTAAGAGAAAGAGATGGATTTCTACCTCTTATTGCCTGCTCAATCCGTTCTGTTTTTGAAATATCGCAAGATAAG CTATTTAGAACACATAGGTTTTTATTTCCGACGTTCAAAACTAAAATTTTCACACCCGAAACTAATAAGGAAATGAAAGA TAAACTCTTAGGGAATATTATACATATAATTTTTTTAGTAAAGAAAAACCCCAAATTACTTACGAAAATAGCCGAGAGGC TGGATATTAGTTACTCTACATTTACAAACTCACTAAATCTTGATGAATTCAAGTCGGCTGTAAAATATTCCCATATTGGA GCGCATCAATCTACTAAATTTCTCTCAAAACCAAAAATAGAAGTTTGTGCGGATACATGTGGGTTATTTGCTGTAATTTG TGATGTGTTAATAAATATGAAAAAAAATGACATTATTGATTTGAATGCAACAATAGTTAATGAGGCTGATCTAAATAATT TTTTTAGAATATAA
Upstream 100 bases:
>100_bases AAAGATAAGATAATATCAACAAGTAAATTGAAGTCATTTCTTTTTGAGTGTGAACAGAGTCAACTTTTTTATGTGAAATA CAATTTTTCTAAAGAAGAGA
Downstream 100 bases:
>100_bases ATTTATTTATTTTAAGATATTTTTATGCTGAAAAAAGGCTATGTTAAATTGAAAGAATAGCCTTTTTTAATAAACTTCTA TTTGTGGTTTTGTAAGCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 457; Mature: 456
Protein sequence:
>457_residues MSFFIRGINKTPFPIDRTDYSINIELIIFLFDKGKNTKSISNLYKRLHDNALYPLVYINNNLFNNTIIFDPDLLRKKSSG ASLPQMIGYVSIQSQNKNIEFNSDRTYFVDNSITKNLVNSLKKLNETIQTKGSDLKNELKVGTPSSLTGKSYPTEDVTSI RNKPASISIDRKKTIKFHIPSEQIDLNEYIYAVKDSSGNDINKNDVVTSIEGSVTNSRILEAIEEPCELRVVFRYEDSVT GLVSADVFLCFEKKISNISGSKEEKSLFTIQSASGYTVNTGTVSSIIYAIDKLYSLRERDGFLPLIACSIRSVFEISQDK LFRTHRFLFPTFKTKIFTPETNKEMKDKLLGNIIHIIFLVKKNPKLLTKIAERLDISYSTFTNSLNLDEFKSAVKYSHIG AHQSTKFLSKPKIEVCADTCGLFAVICDVLINMKKNDIIDLNATIVNEADLNNFFRI
Sequences:
>Translated_457_residues MSFFIRGINKTPFPIDRTDYSINIELIIFLFDKGKNTKSISNLYKRLHDNALYPLVYINNNLFNNTIIFDPDLLRKKSSG ASLPQMIGYVSIQSQNKNIEFNSDRTYFVDNSITKNLVNSLKKLNETIQTKGSDLKNELKVGTPSSLTGKSYPTEDVTSI RNKPASISIDRKKTIKFHIPSEQIDLNEYIYAVKDSSGNDINKNDVVTSIEGSVTNSRILEAIEEPCELRVVFRYEDSVT GLVSADVFLCFEKKISNISGSKEEKSLFTIQSASGYTVNTGTVSSIIYAIDKLYSLRERDGFLPLIACSIRSVFEISQDK LFRTHRFLFPTFKTKIFTPETNKEMKDKLLGNIIHIIFLVKKNPKLLTKIAERLDISYSTFTNSLNLDEFKSAVKYSHIG AHQSTKFLSKPKIEVCADTCGLFAVICDVLINMKKNDIIDLNATIVNEADLNNFFRI >Mature_456_residues SFFIRGINKTPFPIDRTDYSINIELIIFLFDKGKNTKSISNLYKRLHDNALYPLVYINNNLFNNTIIFDPDLLRKKSSGA SLPQMIGYVSIQSQNKNIEFNSDRTYFVDNSITKNLVNSLKKLNETIQTKGSDLKNELKVGTPSSLTGKSYPTEDVTSIR NKPASISIDRKKTIKFHIPSEQIDLNEYIYAVKDSSGNDINKNDVVTSIEGSVTNSRILEAIEEPCELRVVFRYEDSVTG LVSADVFLCFEKKISNISGSKEEKSLFTIQSASGYTVNTGTVSSIIYAIDKLYSLRERDGFLPLIACSIRSVFEISQDKL FRTHRFLFPTFKTKIFTPETNKEMKDKLLGNIIHIIFLVKKNPKLLTKIAERLDISYSTFTNSLNLDEFKSAVKYSHIGA HQSTKFLSKPKIEVCADTCGLFAVICDVLINMKKNDIIDLNATIVNEADLNNFFRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51782; Mature: 51651
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFFIRGINKTPFPIDRTDYSINIELIIFLFDKGKNTKSISNLYKRLHDNALYPLVYINN CCEEEECCCCCCCCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEC NLFNNTIIFDPDLLRKKSSGASLPQMIGYVSIQSQNKNIEFNSDRTYFVDNSITKNLVNS CCCCCEEEECHHHHHCCCCCCCCHHHHEEEEEECCCCCEEECCCCEEEECCHHHHHHHHH LKKLNETIQTKGSDLKNELKVGTPSSLTGKSYPTEDVTSIRNKPASISIDRKKTIKFHIP HHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCEEEEEECC SEQIDLNEYIYAVKDSSGNDINKNDVVTSIEGSVTNSRILEAIEEPCELRVVFRYEDSVT CCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCEEEEEEEECCCCC GLVSADVFLCFEKKISNISGSKEEKSLFTIQSASGYTVNTGTVSSIIYAIDKLYSLRERD CHHHHHHHEEEHHHHCCCCCCCCCCEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHCC GFLPLIACSIRSVFEISQDKLFRTHRFLFPTFKTKIFTPETNKEMKDKLLGNIIHIIFLV CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHEEEEEEE KKNPKLLTKIAERLDISYSTFTNSLNLDEFKSAVKYSHIGAHQSTKFLSKPKIEVCADTC ECCHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHH GLFAVICDVLINMKKNDIIDLNATIVNEADLNNFFRI HHHHHHHHHHHCCCCCCEEEECEEEECCCCCHHHCCC >Mature Secondary Structure SFFIRGINKTPFPIDRTDYSINIELIIFLFDKGKNTKSISNLYKRLHDNALYPLVYINN CEEEECCCCCCCCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEC NLFNNTIIFDPDLLRKKSSGASLPQMIGYVSIQSQNKNIEFNSDRTYFVDNSITKNLVNS CCCCCEEEECHHHHHCCCCCCCCHHHHEEEEEECCCCCEEECCCCEEEECCHHHHHHHHH LKKLNETIQTKGSDLKNELKVGTPSSLTGKSYPTEDVTSIRNKPASISIDRKKTIKFHIP HHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCEEEEEECC SEQIDLNEYIYAVKDSSGNDINKNDVVTSIEGSVTNSRILEAIEEPCELRVVFRYEDSVT CCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCEEEEEEEECCCCC GLVSADVFLCFEKKISNISGSKEEKSLFTIQSASGYTVNTGTVSSIIYAIDKLYSLRERD CHHHHHHHEEEHHHHCCCCCCCCCCEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHCC GFLPLIACSIRSVFEISQDKLFRTHRFLFPTFKTKIFTPETNKEMKDKLLGNIIHIIFLV CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHEEEEEEE KKNPKLLTKIAERLDISYSTFTNSLNLDEFKSAVKYSHIGAHQSTKFLSKPKIEVCADTC ECCHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHH GLFAVICDVLINMKKNDIIDLNATIVNEADLNNFFRI HHHHHHHHHHHCCCCCCEEEECEEEECCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA