Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
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Accession | NC_004088 |
Length | 4,600,755 |
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The map label for this gene is fyuA [H]
Identifier: 22127280
GI number: 22127280
Start: 3768440
End: 3770512
Strand: Direct
Name: fyuA [H]
Synonym: y3404
Alternate gene names: 22127280
Gene position: 3768440-3770512 (Clockwise)
Preceding gene: 22127279
Following gene: 22127281
Centisome position: 81.91
GC content: 36.37
Gene sequence:
>2073_bases ATGATGGTATTTTATCGGAAGTTTTTTACTGTAACGGTTTTAATTTCATTACCCTGCCTGGCATGGTCACAAAGTCATAA TAACAGTAAGGATGAATTAGATACTATTACGGTAGTTGCACAAAAAATTAATCAACAGCAGCAAAAAACACCCATAAGTA TAAGTGTATTAACGGGCTTTGATTTAGAAAGAGAAAATATAGAAAATATCTACGAATCAATAATGCGCATCCCTAATGTC TATATGGTTAAAGCGGGCAATCCATCTGACGCAGGTTTTTTTACCATGCGAGGTACGACCCCCGGAATGGAAGGGATTCA ATCAGTAGGTTTCTTTATTGATGGTGTTTATGCTAATACTTTTGATACGGAATTATTGGATGTTGATAGAATCGAAGTAT TAAGAGGCCCGCAAGCGACGCTATATGGTCGTAATACTGAATCTGGGGTAATCAATGTCATTACTAAAGATCCTGAATTT TCACCTGAGTATAAAATAGGTCTATCTTATGGGAATTATAATCGTACACAGGTAACCACGGTTTTAGGTGGAAGTATTAA TGACAGTGAACAGTTTTCTTATCGTGCAGCATTGAAATATCTTTATGGGAATGGCTACTTTAAGCGTGATTATGACGGTA AAAATAATGTAGATAATCTCAATGATTTTAGTGGTCGGTTTAAACTACGTTGGCAACCTATGGATGATGGTTGGGATGTG ATGACGACCTTTGATATCCAAAATAGGCGTAACGGAAACACTTCTTTTACCGCATTAGATAAAATAAAGTCGGGTCAAAA ATATGTTGACTCAAATTATATTGGCAAATCTGATGTTGATGCTTATAAAGGTCAAGTAAATGCAGTTTATACCTTTGATG ATATTGATTTTACCTCGGTTAGTGCTTATGTAGACGAAAGAAAAGTTGATAATCAAGACCTCGATTTTACGCGATTATCA ATTAGTGAACTATTGATGAATCGAAAAACAAAACAATTTTCACAAGAGTTTCGTTTGAACTCTAAATACAGCGGGCCATT TAATTGGTTGATAGGGAGCTATTATTTTTATCAAGATGATGAAAATGAAATTGATTTCCGCTATCTGCCCTATAACTTAG CACAACTCCGGAAATCCGATATCAAGACCAATAACTACGCAGTGTTTGGCAATGTTAATTATTACCTGCTGAATGATGTT GAGCTTGTGGCGGGTGCAAGGTATGACTATGAGAAAAAGAAACTTAACTTTTTGATGGATAATGGGTTTAACCCATATCA GCCGTATTCTCATGATAATAATAGTAATTCATTTGGGGCTTTTTTGCCTAAGGTAGGGTTGAATTATTATATTACTGGCG ACGCCATGCTATATACCAGCATAGCACGGGGGTATAAAAGTGGCGGGTTTAACACGTTAGGGCCTCAATCTAGTCGCGCT TATAATGCAGAATATATGACGACTTATGAGGCCGGTGTTAAAACCGAATGGTTTGATAGAACGGTTCGTTGGAATACGTC TCTATTCTGGAATGATATGAAAGATCAGCAAGTCGAAGTGGCGTATTATCCTATTTCTTATTCGGTTAACAGCGGTAAGT CATTAAGCCGTGGGTTGGAGTCTGAACTTGCGTGGCGTATTACGCGTGGCCTGACTGTATCTGCAAATGTAGGCTATACT GATGCGTATTTTAAAAATTTCCCAACAGAAATAAAAGTAGATAATAACTATATTCCTGTTAACTATAAAGGTAATCGACC GGCTAATTCGCCAGGGTACACTTATAGTATTGGTGCCGATTATAACTTCCTTAACGGTTATTTTTTTAATGCTACTTATA ATGTTAAAGGAAGTACTTATCTTGATAATGCGAATAGTAAAAAACAACCAGCTTATGGGCTATTAGATCTTACTGCCGGT TATGAGAATAAAGATTATGGTGTCAATGTTTGGATAAAGAATATTCTTGATGAAACTTATGTGACTCGTGCTTTCAAAAT GGATGATGGGATATGGTATGGGCGCGCGGGTGAACCTATTAATTTTGGGGTTAATTTCAATGTTAAATTTTAA
Upstream 100 bases:
>100_bases TTTGATAAAACCTTCTTATCGATTTATATAAATGTGAGTAAATATCATCTAATTAACAGGGTTATTTAATCTTGTTATCT CACTTCATTATGGAAAATTA
Downstream 100 bases:
>100_bases TAAATATTAATAATACATATGGCTGTGACTATTAGATACAGCCACATATTAATTTTGGTGTAAAAGAGCTATGTCCTGTG GGCACTTTATGTTTATGCAT
Product: OM receptor
Products: NA
Alternate protein names: IPR65; IRPC [H]
Number of amino acids: Translated: 690; Mature: 690
Protein sequence:
>690_residues MMVFYRKFFTVTVLISLPCLAWSQSHNNSKDELDTITVVAQKINQQQQKTPISISVLTGFDLERENIENIYESIMRIPNV YMVKAGNPSDAGFFTMRGTTPGMEGIQSVGFFIDGVYANTFDTELLDVDRIEVLRGPQATLYGRNTESGVINVITKDPEF SPEYKIGLSYGNYNRTQVTTVLGGSINDSEQFSYRAALKYLYGNGYFKRDYDGKNNVDNLNDFSGRFKLRWQPMDDGWDV MTTFDIQNRRNGNTSFTALDKIKSGQKYVDSNYIGKSDVDAYKGQVNAVYTFDDIDFTSVSAYVDERKVDNQDLDFTRLS ISELLMNRKTKQFSQEFRLNSKYSGPFNWLIGSYYFYQDDENEIDFRYLPYNLAQLRKSDIKTNNYAVFGNVNYYLLNDV ELVAGARYDYEKKKLNFLMDNGFNPYQPYSHDNNSNSFGAFLPKVGLNYYITGDAMLYTSIARGYKSGGFNTLGPQSSRA YNAEYMTTYEAGVKTEWFDRTVRWNTSLFWNDMKDQQVEVAYYPISYSVNSGKSLSRGLESELAWRITRGLTVSANVGYT DAYFKNFPTEIKVDNNYIPVNYKGNRPANSPGYTYSIGADYNFLNGYFFNATYNVKGSTYLDNANSKKQPAYGLLDLTAG YENKDYGVNVWIKNILDETYVTRAFKMDDGIWYGRAGEPINFGVNFNVKF
Sequences:
>Translated_690_residues MMVFYRKFFTVTVLISLPCLAWSQSHNNSKDELDTITVVAQKINQQQQKTPISISVLTGFDLERENIENIYESIMRIPNV YMVKAGNPSDAGFFTMRGTTPGMEGIQSVGFFIDGVYANTFDTELLDVDRIEVLRGPQATLYGRNTESGVINVITKDPEF SPEYKIGLSYGNYNRTQVTTVLGGSINDSEQFSYRAALKYLYGNGYFKRDYDGKNNVDNLNDFSGRFKLRWQPMDDGWDV MTTFDIQNRRNGNTSFTALDKIKSGQKYVDSNYIGKSDVDAYKGQVNAVYTFDDIDFTSVSAYVDERKVDNQDLDFTRLS ISELLMNRKTKQFSQEFRLNSKYSGPFNWLIGSYYFYQDDENEIDFRYLPYNLAQLRKSDIKTNNYAVFGNVNYYLLNDV ELVAGARYDYEKKKLNFLMDNGFNPYQPYSHDNNSNSFGAFLPKVGLNYYITGDAMLYTSIARGYKSGGFNTLGPQSSRA YNAEYMTTYEAGVKTEWFDRTVRWNTSLFWNDMKDQQVEVAYYPISYSVNSGKSLSRGLESELAWRITRGLTVSANVGYT DAYFKNFPTEIKVDNNYIPVNYKGNRPANSPGYTYSIGADYNFLNGYFFNATYNVKGSTYLDNANSKKQPAYGLLDLTAG YENKDYGVNVWIKNILDETYVTRAFKMDDGIWYGRAGEPINFGVNFNVKF >Mature_690_residues MMVFYRKFFTVTVLISLPCLAWSQSHNNSKDELDTITVVAQKINQQQQKTPISISVLTGFDLERENIENIYESIMRIPNV YMVKAGNPSDAGFFTMRGTTPGMEGIQSVGFFIDGVYANTFDTELLDVDRIEVLRGPQATLYGRNTESGVINVITKDPEF SPEYKIGLSYGNYNRTQVTTVLGGSINDSEQFSYRAALKYLYGNGYFKRDYDGKNNVDNLNDFSGRFKLRWQPMDDGWDV MTTFDIQNRRNGNTSFTALDKIKSGQKYVDSNYIGKSDVDAYKGQVNAVYTFDDIDFTSVSAYVDERKVDNQDLDFTRLS ISELLMNRKTKQFSQEFRLNSKYSGPFNWLIGSYYFYQDDENEIDFRYLPYNLAQLRKSDIKTNNYAVFGNVNYYLLNDV ELVAGARYDYEKKKLNFLMDNGFNPYQPYSHDNNSNSFGAFLPKVGLNYYITGDAMLYTSIARGYKSGGFNTLGPQSSRA YNAEYMTTYEAGVKTEWFDRTVRWNTSLFWNDMKDQQVEVAYYPISYSVNSGKSLSRGLESELAWRITRGLTVSANVGYT DAYFKNFPTEIKVDNNYIPVNYKGNRPANSPGYTYSIGADYNFLNGYFFNATYNVKGSTYLDNANSKKQPAYGLLDLTAG YENKDYGVNVWIKNILDETYVTRAFKMDDGIWYGRAGEPINFGVNFNVKF
Specific function: Receptor for the bacteriocin pesticin and for the siderophore yersiniabactin [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1788478, Length=162, Percent_Identity=30.8641975308642, Blast_Score=74, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 79059; Mature: 79059
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMVFYRKFFTVTVLISLPCLAWSQSHNNSKDELDTITVVAQKINQQQQKTPISISVLTGF CEEEEHHHHHHHHHHHCCHHEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECC DLERENIENIYESIMRIPNVYMVKAGNPSDAGFFTMRGTTPGMEGIQSVGFFIDGVYANT CCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHEEEEEECCC FDTELLDVDRIEVLRGPQATLYGRNTESGVINVITKDPEFSPEYKIGLSYGNYNRTQVTT CCCCCCCCCHHHHHCCCCEEEECCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCEEEEE VLGGSINDSEQFSYRAALKYLYGNGYFKRDYDGKNNVDNLNDFSGRFKLRWQPMDDGWDV EECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCE MTTFDIQNRRNGNTSFTALDKIKSGQKYVDSNYIGKSDVDAYKGQVNAVYTFDDIDFTSV EEEEEECCCCCCCCCEEEHHHHCCCCEECCCCCCCCCCCHHHCCCEEEEEEECCCCCCCH SAYVDERKVDNQDLDFTRLSISELLMNRKTKQFSQEFRLNSKYSGPFNWLIGSYYFYQDD HHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECC ENEIDFRYLPYNLAQLRKSDIKTNNYAVFGNVNYYLLNDVELVAGARYDYEKKKLNFLMD CCCEEEEECCCHHHHHHHHCCCCCCEEEEECCEEEEEECEEEEECCCCCCCHHHEEEEEC NGFNPYQPYSHDNNSNSFGAFLPKVGLNYYITGDAMLYTSIARGYKSGGFNTLGPQSSRA CCCCCCCCCCCCCCCCCHHEEHHCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCC YNAEYMTTYEAGVKTEWFDRTVRWNTSLFWNDMKDQQVEVAYYPISYSVNSGKSLSRGLE CCCEEEEEECCCCCCHHHCCEEEECCEEEECCCCCCEEEEEEEEEEEECCCCCHHHHHHH SELAWRITRGLTVSANVGYTDAYFKNFPTEIKVDNNYIPVNYKGNRPANSPGYTYSIGAD HHHHEEEECCEEEEECCCCCHHHHHCCCCEEEECCCEEEEEECCCCCCCCCCEEEECCCC YNFLNGYFFNATYNVKGSTYLDNANSKKQPAYGLLDLTAGYENKDYGVNVWIKNILDETY CCCCCEEEEEEEEECCCCEEECCCCCCCCCCCEEEEEECCCCCCCCCEEEEEHHHHHHHH VTRAFKMDDGIWYGRAGEPINFGVNFNVKF HHEEEEECCCEEECCCCCCEEEEEEEEEEC >Mature Secondary Structure MMVFYRKFFTVTVLISLPCLAWSQSHNNSKDELDTITVVAQKINQQQQKTPISISVLTGF CEEEEHHHHHHHHHHHCCHHEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECC DLERENIENIYESIMRIPNVYMVKAGNPSDAGFFTMRGTTPGMEGIQSVGFFIDGVYANT CCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHEEEEEECCC FDTELLDVDRIEVLRGPQATLYGRNTESGVINVITKDPEFSPEYKIGLSYGNYNRTQVTT CCCCCCCCCHHHHHCCCCEEEECCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCEEEEE VLGGSINDSEQFSYRAALKYLYGNGYFKRDYDGKNNVDNLNDFSGRFKLRWQPMDDGWDV EECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCE MTTFDIQNRRNGNTSFTALDKIKSGQKYVDSNYIGKSDVDAYKGQVNAVYTFDDIDFTSV EEEEEECCCCCCCCCEEEHHHHCCCCEECCCCCCCCCCCHHHCCCEEEEEEECCCCCCCH SAYVDERKVDNQDLDFTRLSISELLMNRKTKQFSQEFRLNSKYSGPFNWLIGSYYFYQDD HHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECC ENEIDFRYLPYNLAQLRKSDIKTNNYAVFGNVNYYLLNDVELVAGARYDYEKKKLNFLMD CCCEEEEECCCHHHHHHHHCCCCCCEEEEECCEEEEEECEEEEECCCCCCCHHHEEEEEC NGFNPYQPYSHDNNSNSFGAFLPKVGLNYYITGDAMLYTSIARGYKSGGFNTLGPQSSRA CCCCCCCCCCCCCCCCCHHEEHHCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCC YNAEYMTTYEAGVKTEWFDRTVRWNTSLFWNDMKDQQVEVAYYPISYSVNSGKSLSRGLE CCCEEEEEECCCCCCHHHCCEEEECCEEEECCCCCCEEEEEEEEEEEECCCCCHHHHHHH SELAWRITRGLTVSANVGYTDAYFKNFPTEIKVDNNYIPVNYKGNRPANSPGYTYSIGAD HHHHEEEECCEEEEECCCCCHHHHHCCCCEEEECCCEEEEEECCCCCCCCCCEEEECCCC YNFLNGYFFNATYNVKGSTYLDNANSKKQPAYGLLDLTAGYENKDYGVNVWIKNILDETY CCCCCEEEEEEEEECCCCEEECCCCCCCCCCCEEEEEECCCCCCCCCEEEEEHHHHHHHH VTRAFKMDDGIWYGRAGEPINFGVNFNVKF HHEEEEECCCEEECCCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA