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The map label for this gene is ycfF [C]

Identifier: 21672621

GI number: 21672621

Start: 391112

End: 391459

Strand: Direct

Name: ycfF [C]

Synonym: BUsg345

Alternate gene names: 21672621

Gene position: 391112-391459 (Clockwise)

Preceding gene: 21672620

Following gene: 21672625

Centisome position: 60.97

GC content: 22.13

Gene sequence:

>348_bases
ATGAATAATAAAGATTTAATTTTTCAAAAAATAATAAAAAGAGAAACATCAACACATATTATTTACCAAGATAAAATAGT
AACAGCTTTCGAAGATATAGCTCCAAAAGCTCCGATACATATAATAGTTATACCTAATATTTTTATAAAAACGTTAAATG
ATATTAATCAAAAAAATAAAAATATTTTTGCACATATGCTTTATATTGCTGTTAAAATTGCTAAAAATAAAAAAATTAGT
GAAGATGGATATAAAATAGTTATGAATTGTAATAAAAATGGTGGCCAAGAAATAAACTATCTTCATATGCATTTACTAGG
AGGAGAAAAACTGAAAGCACTATATTAA

Upstream 100 bases:

>100_bases
ATATATAAATAATATATAAAAAAAAGGGTGAGTAAAAATTTAACTCGCCCTAGTATTTATAAAATTTAATATTAATTTAA
ATTATACAAAAGAATATTTT

Downstream 100 bases:

>100_bases
AAAATATTTAACTTTTTAAAGTTCAAAACTGAATAGAATTTTATTACTTTTAATTTTTTTATTTTTTGCAAATAGCTCTT
CTTTTTTTAAAAATATAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MNNKDLIFQKIIKRETSTHIIYQDKIVTAFEDIAPKAPIHIIVIPNIFIKTLNDINQKNKNIFAHMLYIAVKIAKNKKIS
EDGYKIVMNCNKNGGQEINYLHMHLLGGEKLKALY

Sequences:

>Translated_115_residues
MNNKDLIFQKIIKRETSTHIIYQDKIVTAFEDIAPKAPIHIIVIPNIFIKTLNDINQKNKNIFAHMLYIAVKIAKNKKIS
EDGYKIVMNCNKNGGQEINYLHMHLLGGEKLKALY
>Mature_115_residues
MNNKDLIFQKIIKRETSTHIIYQDKIVTAFEDIAPKAPIHIIVIPNIFIKTLNDINQKNKNIFAHMLYIAVKIAKNKKIS
EDGYKIVMNCNKNGGQEINYLHMHLLGGEKLKALY

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain

Homologues:

Organism=Homo sapiens, GI14211923, Length=106, Percent_Identity=34.9056603773585, Blast_Score=89, Evalue=6e-19,
Organism=Homo sapiens, GI4885413, Length=109, Percent_Identity=33.9449541284404, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1787346, Length=111, Percent_Identity=49.5495495495495, Blast_Score=118, Evalue=8e-29,
Organism=Caenorhabditis elegans, GI17506713, Length=108, Percent_Identity=37.037037037037, Blast_Score=87, Evalue=1e-18,
Organism=Drosophila melanogaster, GI28574010, Length=110, Percent_Identity=35.4545454545455, Blast_Score=92, Evalue=8e-20,
Organism=Drosophila melanogaster, GI24581222, Length=110, Percent_Identity=35.4545454545455, Blast_Score=92, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHIT_BUCAP (Q8K9I9)

Other databases:

- EMBL:   AE013218
- RefSeq:   NP_660688.1
- ProteinModelPortal:   Q8K9I9
- SMR:   Q8K9I9
- EnsemblBacteria:   EBBUCT00000000045
- GeneID:   1005591
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg345
- GeneTree:   EBGT00050000007882
- HOGENOM:   HBG743217
- OMA:   NCNRHGG
- ProtClustDB:   CLSK315946
- BioCyc:   BAPH198804:BUSG345-MONOMER
- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310
- Gene3D:   G3DSA:3.30.428.10
- PANTHER:   PTHR23089
- PRINTS:   PR00332

Pfam domain/function: PF01230 HIT; SSF54197 His_triad-like_motif

EC number: NA

Molecular weight: Translated: 13264; Mature: 13264

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: PS00892 HIT_1; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNKDLIFQKIIKRETSTHIIYQDKIVTAFEDIAPKAPIHIIVIPNIFIKTLNDINQKNK
CCCHHHHHHHHHHCCCCCEEEEECHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHCCCCH
NIFAHMLYIAVKIAKNKKISEDGYKIVMNCNKNGGQEINYLHMHLLGGEKLKALY
HHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEEEEEECCCEEEECC
>Mature Secondary Structure
MNNKDLIFQKIIKRETSTHIIYQDKIVTAFEDIAPKAPIHIIVIPNIFIKTLNDINQKNK
CCCHHHHHHHHHHCCCCCEEEEECHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHCCCCH
NIFAHMLYIAVKIAKNKKISEDGYKIVMNCNKNGGQEINYLHMHLLGGEKLKALY
HHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEEEEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12089438