| Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
|---|---|
| Accession | NC_004061 |
| Length | 641,454 |
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The map label for this gene is Y281 [C]
Identifier: 21672550
GI number: 21672550
Start: 306733
End: 307635
Strand: Direct
Name: Y281 [C]
Synonym: BUsg270
Alternate gene names: 21672550
Gene position: 306733-307635 (Clockwise)
Preceding gene: 21672541
Following gene: 21672551
Centisome position: 47.82
GC content: 24.7
Gene sequence:
>903_bases ATGCACAAAATTATAATCATAATGTTGTTTTTTTTAGTTTCAATTACTTGGGGGACAACTTGGATCGCAATGAAAATCGC AGTAGAAACAATCCCACCTTTTTTTGCGACTGGGATAAGATTTTTAGCAGCCTCTCCATTGTTAATTATACTTTCTTATT TAACAAAAAAACCTCTTTTATTCCCGTATGGTCAAAGACGTTTTCAAATTTTTATTTCTATCTTTTATTTTTCAATACCT TTTACATTAATGTTATATGGTGGTAGTTATGTAAATTCTTCTATTTCTTCTATTATATTTGCTAATATGCCTGTTTTAGT ATTAATAATTTCACATTTCTATTTAAAAAAAAAAATAAATTTTATTCAAAAAGTTGGTATGGTAATTGCTTTAATTACAT TATTTTTCGTGTTATTAATAGATCTTAAATCGGAATGTTTTTTTCAGTGGAAAGGTATTTTAGCTTTACTTTTAGCATTA CTTAGTCATGCTGTAATTTACGTTGAATGTCAAAAAAAATCTTGTAATGTATCTGTTATTACATTTAATGCACTACCGTC TTTAATATCTGGAATATTTTTGTCTATTATATCCTGGTTTATCGAATCTCCTAACATTAATTTTTTTTCTACTAGATCTA TTTTAGCTGTTTTTTATCTTGGTAATTTTTGTGGTATTTGCGGTATTTTATCTTATTTTTATTTGCAAAAAAGAGTCAGT TCGTTCTATGCTTCTATAGTTTTTTTAATTTTCCCATTAATTGCAGGTTTTTTAGAAATATATATTTATAAAAAAACAAT CTTATTGTATGAGTTATGGTTTATTATTCCGTCAGGATTAGGAATATTATTAACTTTAATTCCAATAAATTTTTTTAAAA ATATTATAAGGTTTTCAAAATGA
Upstream 100 bases:
>100_bases ATCCTTAAATATTTTATTATTTTTTATAAAAAATAAGATGTAACTATTATTAGTTTAATATGTTATATAGTCTATATTTT TATTATCTTGGAATTTTAAT
Downstream 100 bases:
>100_bases CTGCAAAAATACAAAAAATATTATCTGATTTAGGATATGGTTCACGTCGTTTTATTGAATGTATGATTAAATGCGGTAAA ATAAGTATTAATGGTGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MHKIIIIMLFFLVSITWGTTWIAMKIAVETIPPFFATGIRFLAASPLLIILSYLTKKPLLFPYGQRRFQIFISIFYFSIP FTLMLYGGSYVNSSISSIIFANMPVLVLIISHFYLKKKINFIQKVGMVIALITLFFVLLIDLKSECFFQWKGILALLLAL LSHAVIYVECQKKSCNVSVITFNALPSLISGIFLSIISWFIESPNINFFSTRSILAVFYLGNFCGICGILSYFYLQKRVS SFYASIVFLIFPLIAGFLEIYIYKKTILLYELWFIIPSGLGILLTLIPINFFKNIIRFSK
Sequences:
>Translated_300_residues MHKIIIIMLFFLVSITWGTTWIAMKIAVETIPPFFATGIRFLAASPLLIILSYLTKKPLLFPYGQRRFQIFISIFYFSIP FTLMLYGGSYVNSSISSIIFANMPVLVLIISHFYLKKKINFIQKVGMVIALITLFFVLLIDLKSECFFQWKGILALLLAL LSHAVIYVECQKKSCNVSVITFNALPSLISGIFLSIISWFIESPNINFFSTRSILAVFYLGNFCGICGILSYFYLQKRVS SFYASIVFLIFPLIAGFLEIYIYKKTILLYELWFIIPSGLGILLTLIPINFFKNIIRFSK >Mature_300_residues MHKIIIIMLFFLVSITWGTTWIAMKIAVETIPPFFATGIRFLAASPLLIILSYLTKKPLLFPYGQRRFQIFISIFYFSIP FTLMLYGGSYVNSSISSIIFANMPVLVLIISHFYLKKKINFIQKVGMVIALITLFFVLLIDLKSECFFQWKGILALLLAL LSHAVIYVECQKKSCNVSVITFNALPSLISGIFLSIISWFIESPNINFFSTRSILAVFYLGNFCGICGILSYFYLQKRVS SFYASIVFLIFPLIAGFLEIYIYKKTILLYELWFIIPSGLGILLTLIPINFFKNIIRFSK
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y270_BUCAP (P42394)
Other databases:
- EMBL: Z19055 - EMBL: AE013218 - PIR: S36430 - RefSeq: NP_660617.1 - EnsemblBacteria: EBBUCT00000000401 - GeneID: 1005473 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg270 - GeneTree: EBGT00050000008042 - HOGENOM: HBG303466 - OMA: WIAMKIA - ProtClustDB: CLSK862159 - BioCyc: BAPH198804:BUSG270-MONOMER - GO: GO:0006810 - InterPro: IPR000620
Pfam domain/function: PF00892 DUF6
EC number: NA
Molecular weight: Translated: 34376; Mature: 34376
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xbb95e08)-; HASH(0xc2bf2dc)-; HASH(0x40473a84)-; HASH(0xc1601f4)-; HASH(0xc42364c)-; HASH(0xb8cca48)-; HASH(0xc059b30)-; HASH(0xbf9d3c8)-; HASH(0xc566a08)-; HASH(0xc132cd4)-;
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKIIIIMLFFLVSITWGTTWIAMKIAVETIPPFFATGIRFLAASPLLIILSYLTKKPLL CHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHCCCCC FPYGQRRFQIFISIFYFSIPFTLMLYGGSYVNSSISSIIFANMPVLVLIISHFYLKKKIN CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH FIQKVGMVIALITLFFVLLIDLKSECFFQWKGILALLLALLSHAVIYVECQKKSCNVSVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEE TFNALPSLISGIFLSIISWFIESPNINFFSTRSILAVFYLGNFCGICGILSYFYLQKRVS EHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFYASIVFLIFPLIAGFLEIYIYKKTILLYELWFIIPSGLGILLTLIPINFFKNIIRFSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCH >Mature Secondary Structure MHKIIIIMLFFLVSITWGTTWIAMKIAVETIPPFFATGIRFLAASPLLIILSYLTKKPLL CHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHCCCCC FPYGQRRFQIFISIFYFSIPFTLMLYGGSYVNSSISSIIFANMPVLVLIISHFYLKKKIN CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH FIQKVGMVIALITLFFVLLIDLKSECFFQWKGILALLLALLSHAVIYVECQKKSCNVSVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEE TFNALPSLISGIFLSIISWFIESPNINFFSTRSILAVFYLGNFCGICGILSYFYLQKRVS EHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFYASIVFLIFPLIAGFLEIYIYKKTILLYELWFIIPSGLGILLTLIPINFFKNIIRFSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8407819; 12089438