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The map label for this gene is ychA [C]

Identifier: 21672456

GI number: 21672456

Start: 187362

End: 188171

Strand: Direct

Name: ychA [C]

Synonym: BUsg167

Alternate gene names: 21672456

Gene position: 187362-188171 (Clockwise)

Preceding gene: 21672455

Following gene: 21672458

Centisome position: 29.21

GC content: 26.91

Gene sequence:

>810_bases
ATGAAATCTTTTTCCAATATTGATTTTTCTAAATTATCGCTTATTGATTCTATTATTGCGACTTCTCAAATAATTAGAGA
AGATTTTCCTACAAAATTTGTAATTTCTGATTTATATAATAAGGTAAAAGAAGCCAAATTTTATATTTCATCTGAAATTG
AACCAAACTTAAAATTAAAAAAATTGCTGAAACTTTTTTATAAAACTTGGAATTTTGGTGCTGCGAGTGGTATATATAAA
CTTTCAGATGTTTTATGGATTGATAATGTTTTAAAAACCCGTCAGGGTACTGCTGTTTCTTTAGGTATTCTTTTTTTACA
TATTGCACAAGAATTAAAATTACCCTTAAATCCTGTAGTATTTCCTACACAACTCATTTTAAGAGCAGATTGGATAAATA
AAAAAAAATGGTTAATTAATCCCTTTAATGGAGAAATGTTAGATCAACATACTCTAGAGGTATGGCTGAAAGGTAATATT
AGTCCAACTGCAGAATTATATGAACATGATTTGTACAAAGCAGAATCTATTACTGTTATTCGTAAAATGTTAGACATATT
AAAATCAGCTTTAATGGAAGAAAAAAAAATGGAATTAGCACTAAATGTAAGCAATTTACTATTACAAATCAATCCTAATG
ATCCATATGAAATTCGTGACAGAGGACTGATATATGCAAATTTAGAATGTAATCATGTTGCTTTAACAGATTTAATTTAT
TTTGTTGAACATTGTCCTGAAGATCCTATTAGTGAAATCATTAAAGTACAAATTCATGCTATTGAGCAGAAAAAAATGAT
ATTGCATTAG

Upstream 100 bases:

>100_bases
AAATATAATTTTACATTATGATTAAATATATATTAATATATCTCTACCTTCAAATTTTAAATTTTTTATTATCTAAACAA
TATTTATATAACTAATAACT

Downstream 100 bases:

>100_bases
TAATTTTTTTTAAATATTTTATCCTAAGTTAATTATTTTACGTTTATGTTCTGTTGTTAAATATAACCTTTCAATTATTT
GTTTATTTAAAGAATTTACT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MKSFSNIDFSKLSLIDSIIATSQIIREDFPTKFVISDLYNKVKEAKFYISSEIEPNLKLKKLLKLFYKTWNFGAASGIYK
LSDVLWIDNVLKTRQGTAVSLGILFLHIAQELKLPLNPVVFPTQLILRADWINKKKWLINPFNGEMLDQHTLEVWLKGNI
SPTAELYEHDLYKAESITVIRKMLDILKSALMEEKKMELALNVSNLLLQINPNDPYEIRDRGLIYANLECNHVALTDLIY
FVEHCPEDPISEIIKVQIHAIEQKKMILH

Sequences:

>Translated_269_residues
MKSFSNIDFSKLSLIDSIIATSQIIREDFPTKFVISDLYNKVKEAKFYISSEIEPNLKLKKLLKLFYKTWNFGAASGIYK
LSDVLWIDNVLKTRQGTAVSLGILFLHIAQELKLPLNPVVFPTQLILRADWINKKKWLINPFNGEMLDQHTLEVWLKGNI
SPTAELYEHDLYKAESITVIRKMLDILKSALMEEKKMELALNVSNLLLQINPNDPYEIRDRGLIYANLECNHVALTDLIY
FVEHCPEDPISEIIKVQIHAIEQKKMILH
>Mature_269_residues
MKSFSNIDFSKLSLIDSIIATSQIIREDFPTKFVISDLYNKVKEAKFYISSEIEPNLKLKKLLKLFYKTWNFGAASGIYK
LSDVLWIDNVLKTRQGTAVSLGILFLHIAQELKLPLNPVVFPTQLILRADWINKKKWLINPFNGEMLDQHTLEVWLKGNI
SPTAELYEHDLYKAESITVIRKMLDILKSALMEEKKMELALNVSNLLLQINPNDPYEIRDRGLIYANLECNHVALTDLIY
FVEHCPEDPISEIIKVQIHAIEQKKMILH

Specific function: Unknown

COG id: COG2912

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0162 family

Homologues:

Organism=Escherichia coli, GI1787465, Length=269, Percent_Identity=56.8773234200744, Blast_Score=315, Evalue=2e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y167_BUCAP (Q8K9W8)

Other databases:

- EMBL:   AE013218
- RefSeq:   NP_660523.1
- EnsemblBacteria:   EBBUCT00000000142
- GeneID:   1005364
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg167
- GeneTree:   EBGT00050000007751
- HOGENOM:   HBG644081
- OMA:   FINPWDG
- ProtClustDB:   PRK10941
- BioCyc:   BAPH198804:BUSG167-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31113; Mature: 31113

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSFSNIDFSKLSLIDSIIATSQIIREDFPTKFVISDLYNKVKEAKFYISSEIEPNLKLK
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCCCCCHHHH
KLLKLFYKTWNFGAASGIYKLSDVLWIDNVLKTRQGTAVSLGILFLHIAQELKLPLNPVV
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCC
FPTQLILRADWINKKKWLINPFNGEMLDQHTLEVWLKGNISPTAELYEHDLYKAESITVI
CHHHHHHHHHCCCCCCEEECCCCCCHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHH
RKMLDILKSALMEEKKMELALNVSNLLLQINPNDPYEIRDRGLIYANLECNHVALTDLIY
HHHHHHHHHHHHHHHHHHHEEEEEHEEEEECCCCCCEECCCCEEEEECCCCHHHHHHHHH
FVEHCPEDPISEIIKVQIHAIEQKKMILH
HHHHCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSFSNIDFSKLSLIDSIIATSQIIREDFPTKFVISDLYNKVKEAKFYISSEIEPNLKLK
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCCCCCHHHH
KLLKLFYKTWNFGAASGIYKLSDVLWIDNVLKTRQGTAVSLGILFLHIAQELKLPLNPVV
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCC
FPTQLILRADWINKKKWLINPFNGEMLDQHTLEVWLKGNISPTAELYEHDLYKAESITVI
CHHHHHHHHHCCCCCCEEECCCCCCHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHH
RKMLDILKSALMEEKKMELALNVSNLLLQINPNDPYEIRDRGLIYANLECNHVALTDLIY
HHHHHHHHHHHHHHHHHHHEEEEEHEEEEECCCCCCEECCCCEEEEECCCCHHHHHHHHH
FVEHCPEDPISEIIKVQIHAIEQKKMILH
HHHHCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12089438