Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
---|---|
Accession | NC_004061 |
Length | 641,454 |
Click here to switch to the map view.
The map label for this gene is hisB
Identifier: 21672387
GI number: 21672387
Start: 107890
End: 108957
Strand: Direct
Name: hisB
Synonym: BUsg095
Alternate gene names: 21672387
Gene position: 107890-108957 (Clockwise)
Preceding gene: 21672386
Following gene: 21672388
Centisome position: 16.82
GC content: 27.15
Gene sequence:
>1068_bases ATGAAACAAAAAATATTATTTATTGATCGAGATGGAACATTAATTCATGAACCATCTAATGATTGTCAAGTGGATGCAAT TAATAAACTTGAATTTAAAAAATATATTATTTCTTCACTATGTCAATTAATGAATTTTGGTTATAAATTTGTTATGGTGA CAAACCAAGATGGTCTTGGCAGTAAATCATTTCCTCGGGAAAATTTTAATATTCCACATTTTTTTATGTTAAACATTTTT CGTTCAGAAGGAATAATATTTGAAGATGTTTTAATTTGTCCTCATTTTTTAGATGATAATTGTGATTGTCGTAAACCTCA AACTAAACTGTTAAAACCTTGGTTGAAAAAAAATAAGATAGATAAACAACGCAGTTATGTAATTGGTGATCGAGAAACTG ATATGGAATTAGCAAAAAATATAAATTTAACAGGTATACAATACAAGGAGAAAGAATTTAATTGGATAGATATTACAAAA GAAATTATAAAAAGAAATAGATATAGAGAAGTGATTCGAGAAACAAAAGAAACTTATATACATATAAAGTTATGGTTGGA TTTAGAACATCATAGTTGTATCCAAACTGGTATTAATTTTTTTGATCATATGTTAGAACAATTATCTATTCATAGCGGAA TTTCAATGTATATTTTAGCAAAAGGAGATTTGCAAATTGATGACCATCATACTATAGAAGATACTGGAATTGTCTTAGGA GAGGCATTATCTCAAGCATTAAACAATAAAAATGGTTTATCTAGATATGGTTTTGTTTTGCCTATGGATGAAAGTCAAGC AAAATGCATTATAGATTTATCAAATCGTCCATATTTATCTTTTAATGCTCACTTTAAACATAAAATGGTTGGTGATATGA ATACTGATATGGTTGAACATTTTTTTTATTCTCTTTGTTGTTCTATGAAAATCACCTTACATATAGATGTTAAAGGAAAA AATGATCATCATTGTATTGAAAGTTTGTTTAAAGCATTTGGACGTGCACTCCGCAAGGCAGTAAAAATAGAAGGAAATAC ACTGCCAACATCTAAAGGGATTTTATAA
Upstream 100 bases:
>100_bases ATTGTTTAAGAATATCAATAGGATCCAAGTCAGAATGTATGCGTTTAGTTCAAGAGTTAAAAAATTTTATTTAAAAAATA ATTTTTTCAATGAGGTATTG
Downstream 100 bases:
>100_bases GTGGATATTGCAATATTAAATACTGGTTGTGCTAATTTAACTTCAATTCAAGTTGCAATTAAAAAATTAGGTTATGATTC CATAGTAACTTCTGATCCTT
Product: imidazole glycerol-phosphate dehydratase/histidinol phosphatase
Products: NA
Alternate protein names: Histidinol-phosphatase; Imidazoleglycerol-phosphate dehydratase; IGPD
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MKQKILFIDRDGTLIHEPSNDCQVDAINKLEFKKYIISSLCQLMNFGYKFVMVTNQDGLGSKSFPRENFNIPHFFMLNIF RSEGIIFEDVLICPHFLDDNCDCRKPQTKLLKPWLKKNKIDKQRSYVIGDRETDMELAKNINLTGIQYKEKEFNWIDITK EIIKRNRYREVIRETKETYIHIKLWLDLEHHSCIQTGINFFDHMLEQLSIHSGISMYILAKGDLQIDDHHTIEDTGIVLG EALSQALNNKNGLSRYGFVLPMDESQAKCIIDLSNRPYLSFNAHFKHKMVGDMNTDMVEHFFYSLCCSMKITLHIDVKGK NDHHCIESLFKAFGRALRKAVKIEGNTLPTSKGIL
Sequences:
>Translated_355_residues MKQKILFIDRDGTLIHEPSNDCQVDAINKLEFKKYIISSLCQLMNFGYKFVMVTNQDGLGSKSFPRENFNIPHFFMLNIF RSEGIIFEDVLICPHFLDDNCDCRKPQTKLLKPWLKKNKIDKQRSYVIGDRETDMELAKNINLTGIQYKEKEFNWIDITK EIIKRNRYREVIRETKETYIHIKLWLDLEHHSCIQTGINFFDHMLEQLSIHSGISMYILAKGDLQIDDHHTIEDTGIVLG EALSQALNNKNGLSRYGFVLPMDESQAKCIIDLSNRPYLSFNAHFKHKMVGDMNTDMVEHFFYSLCCSMKITLHIDVKGK NDHHCIESLFKAFGRALRKAVKIEGNTLPTSKGIL >Mature_355_residues MKQKILFIDRDGTLIHEPSNDCQVDAINKLEFKKYIISSLCQLMNFGYKFVMVTNQDGLGSKSFPRENFNIPHFFMLNIF RSEGIIFEDVLICPHFLDDNCDCRKPQTKLLKPWLKKNKIDKQRSYVIGDRETDMELAKNINLTGIQYKEKEFNWIDITK EIIKRNRYREVIRETKETYIHIKLWLDLEHHSCIQTGINFFDHMLEQLSIHSGISMYILAKGDLQIDDHHTIEDTGIVLG EALSQALNNKNGLSRYGFVLPMDESQAKCIIDLSNRPYLSFNAHFKHKMVGDMNTDMVEHFFYSLCCSMKITLHIDVKGK NDHHCIESLFKAFGRALRKAVKIEGNTLPTSKGIL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family
Homologues:
Organism=Escherichia coli, GI87082027, Length=355, Percent_Identity=55.4929577464789, Blast_Score=442, Evalue=1e-125, Organism=Escherichia coli, GI1786399, Length=151, Percent_Identity=28.476821192053, Blast_Score=68, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6324776, Length=165, Percent_Identity=45.4545454545455, Blast_Score=155, Evalue=9e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS7_BUCAP (Q9ZHE4)
Other databases:
- EMBL: AF067228 - EMBL: AE013218 - RefSeq: NP_660454.1 - ProteinModelPortal: Q9ZHE4 - SMR: Q9ZHE4 - EnsemblBacteria: EBBUCT00000000054 - GeneID: 1005912 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg095 - GeneTree: EBGT00050000008038 - HOGENOM: HBG289010 - OMA: QDGLGTP - ProtClustDB: PRK05446 - BioCyc: BAPH198804:BUSG095-MONOMER - GO: GO:0005737 - HAMAP: MF_01022 - InterPro: IPR023214 - InterPro: IPR006549 - InterPro: IPR020566 - InterPro: IPR005954 - InterPro: IPR006543 - InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR013954 - InterPro: IPR020568 - Gene3D: G3DSA:3.40.50.1000 - TIGRFAMs: TIGR01662 - TIGRFAMs: TIGR01261 - TIGRFAMs: TIGR01656
Pfam domain/function: PF00475 IGPD; PF08645 PNK3P; SSF54211 Ribosomal_S5_D2-typ_fold; SSF56784 SSF56784
EC number: =3.1.3.15; =4.2.1.19
Molecular weight: Translated: 41303; Mature: 41303
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: PS00954 IGP_DEHYDRATASE_1; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQKILFIDRDGTLIHEPSNDCQVDAINKLEFKKYIISSLCQLMNFGYKFVMVTNQDGLG CCCEEEEEECCCCEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCC SKSFPRENFNIPHFFMLNIFRSEGIIFEDVLICPHFLDDNCDCRKPQTKLLKPWLKKNKI CCCCCCCCCCCCEEEEEEEHHCCCCEEEHHHHCCHHCCCCCCCCCCHHHHHHHHHHHCCC DKQRSYVIGDRETDMELAKNINLTGIQYKEKEFNWIDITKEIIKRNRYREVIRETKETYI CCHHCEEECCCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCEE HIKLWLDLEHHSCIQTGINFFDHMLEQLSIHSGISMYILAKGDLQIDDHHTIEDTGIVLG EEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCHHHHHHH EALSQALNNKNGLSRYGFVLPMDESQAKCIIDLSNRPYLSFNAHFKHKMVGDMNTDMVEH HHHHHHHCCCCCCCCCCEEEECCCCCCEEEEEECCCCEEEEECCCCCHHHCCCCHHHHHH FFYSLCCSMKITLHIDVKGKNDHHCIESLFKAFGRALRKAVKIEGNTLPTSKGIL HHHHHHHCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCC >Mature Secondary Structure MKQKILFIDRDGTLIHEPSNDCQVDAINKLEFKKYIISSLCQLMNFGYKFVMVTNQDGLG CCCEEEEEECCCCEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCC SKSFPRENFNIPHFFMLNIFRSEGIIFEDVLICPHFLDDNCDCRKPQTKLLKPWLKKNKI CCCCCCCCCCCCEEEEEEEHHCCCCEEEHHHHCCHHCCCCCCCCCCHHHHHHHHHHHCCC DKQRSYVIGDRETDMELAKNINLTGIQYKEKEFNWIDITKEIIKRNRYREVIRETKETYI CCHHCEEECCCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCEE HIKLWLDLEHHSCIQTGINFFDHMLEQLSIHSGISMYILAKGDLQIDDHHTIEDTGIVLG EEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCHHHHHHH EALSQALNNKNGLSRYGFVLPMDESQAKCIIDLSNRPYLSFNAHFKHKMVGDMNTDMVEH HHHHHHHCCCCCCCCCCEEEECCCCCCEEEEEECCCCEEEEECCCCCHHHCCCCHHHHHH FFYSLCCSMKITLHIDVKGKNDHHCIESLFKAFGRALRKAVKIEGNTLPTSKGIL HHHHHHHCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9767718; 12089438