Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
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Accession | NC_004061 |
Length | 641,454 |
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The map label for this gene is hisC
Identifier: 21672386
GI number: 21672386
Start: 106796
End: 107863
Strand: Direct
Name: hisC
Synonym: BUsg094
Alternate gene names: 21672386
Gene position: 106796-107863 (Clockwise)
Preceding gene: 21672385
Following gene: 21672387
Centisome position: 16.65
GC content: 26.03
Gene sequence:
>1068_bases ATGACAGCTAATATAAATAAGTTAGCTCGAAAAAATATACAGAAATTAAACCCTTATCAATCAGCTAGACGAATTGGTGG AAAAGGTGATACATGGTTAAATGCAAATGAATCACCTATATCTGTTCCGTTTAAAGGAAAAGTAAAAGTATTTAATCGTT ATCCAGAATGTCAACCTAATAATTTACTTTCTTCTTATGCGAATTACGTTGGTTTATTAAATAATCAAATTTTAGTTACT AGAGGAGCAGATGAAGGTATTGAACTTTTGATTAAAGCTTTTTGTGAACCCGGTAAAGATGCAATAATTTACTGTCCTCC AACCTATGATATGTATGCCATAAATGCCAAAATTGCAAATGTTGAAATAAAAGAAATTCCTACTTTTAAAAATACTTGGA AAATAGATTTATTGAATATTCGATCCAATCTTAATAAAGTTAAATTAATATATATTTGTAATCCTAACAATCCTACTGGA AACATTGTTTCTCAAGAAGATTTAAAAAGTTTATTAAAAGTTACATTAGGACAATCTCTTGTAATAATAGATGAAGCTTA TATCGAATTTTCCCCAAAAAACAGTATGGTAAATTATTTAAAAACATTTCCCAATTTAATCATTTTAAGAACTTTATCCA AAGCATTTGCATTAGCAGGAATAAGATGTGGTTTTACATTGGCACAAAAAGAGGTGATTGATATTTTACATAAAGTGATT AGTCCTTATCCAATATCTACATTAATTGCTGACATAGCAGTACAATCTTTAGAAAAGAAAGCAATTGACGATATGAAAAA TAGAGTCTTAAAATTAAATATGAATCGTATTTGGTTAATTGATGAATTAAAAAAAATTTCTTGTGTAAAAAAAGTTTTTG ATAGTCATGCTAATTATATTTTAGTAGAATTTTACATGTTTAAAAAAATATTTCAGAGTTTGTGGCAAAAAGGTATAATT TTAAGAAATCAAAATCATAAAAACAATTTGAAAAATTGTTTAAGAATATCAATAGGATCCAAGTCAGAATGTATGCGTTT AGTTCAAGAGTTAAAAAATTTTATTTAA
Upstream 100 bases:
>100_bases TAAATTTATCTAATACGCTTAAAATTCTATCTGAAGCGGAAAAACTTGAAGCACATAAAAATGCTGTAAAAATAAGAGTA GATTTTTTAAAGGAAAAAAT
Downstream 100 bases:
>100_bases AAAATAATTTTTTCAATGAGGTATTGATGAAACAAAAAATATTATTTATTGATCGAGATGGAACATTAATTCATGAACCA TCTAATGATTGTCAAGTGGA
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MTANINKLARKNIQKLNPYQSARRIGGKGDTWLNANESPISVPFKGKVKVFNRYPECQPNNLLSSYANYVGLLNNQILVT RGADEGIELLIKAFCEPGKDAIIYCPPTYDMYAINAKIANVEIKEIPTFKNTWKIDLLNIRSNLNKVKLIYICNPNNPTG NIVSQEDLKSLLKVTLGQSLVIIDEAYIEFSPKNSMVNYLKTFPNLIILRTLSKAFALAGIRCGFTLAQKEVIDILHKVI SPYPISTLIADIAVQSLEKKAIDDMKNRVLKLNMNRIWLIDELKKISCVKKVFDSHANYILVEFYMFKKIFQSLWQKGII LRNQNHKNNLKNCLRISIGSKSECMRLVQELKNFI
Sequences:
>Translated_355_residues MTANINKLARKNIQKLNPYQSARRIGGKGDTWLNANESPISVPFKGKVKVFNRYPECQPNNLLSSYANYVGLLNNQILVT RGADEGIELLIKAFCEPGKDAIIYCPPTYDMYAINAKIANVEIKEIPTFKNTWKIDLLNIRSNLNKVKLIYICNPNNPTG NIVSQEDLKSLLKVTLGQSLVIIDEAYIEFSPKNSMVNYLKTFPNLIILRTLSKAFALAGIRCGFTLAQKEVIDILHKVI SPYPISTLIADIAVQSLEKKAIDDMKNRVLKLNMNRIWLIDELKKISCVKKVFDSHANYILVEFYMFKKIFQSLWQKGII LRNQNHKNNLKNCLRISIGSKSECMRLVQELKNFI >Mature_354_residues TANINKLARKNIQKLNPYQSARRIGGKGDTWLNANESPISVPFKGKVKVFNRYPECQPNNLLSSYANYVGLLNNQILVTR GADEGIELLIKAFCEPGKDAIIYCPPTYDMYAINAKIANVEIKEIPTFKNTWKIDLLNIRSNLNKVKLIYICNPNNPTGN IVSQEDLKSLLKVTLGQSLVIIDEAYIEFSPKNSMVNYLKTFPNLIILRTLSKAFALAGIRCGFTLAQKEVIDILHKVIS PYPISTLIADIAVQSLEKKAIDDMKNRVLKLNMNRIWLIDELKKISCVKKVFDSHANYILVEFYMFKKIFQSLWQKGIIL RNQNHKNNLKNCLRISIGSKSECMRLVQELKNFI
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Homologues:
Organism=Escherichia coli, GI1788332, Length=351, Percent_Identity=53.8461538461538, Blast_Score=429, Evalue=1e-121, Organism=Caenorhabditis elegans, GI71994472, Length=179, Percent_Identity=27.3743016759777, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71994476, Length=179, Percent_Identity=27.3743016759777, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6322075, Length=379, Percent_Identity=30.3430079155673, Blast_Score=169, Evalue=8e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS8_BUCAP (Q9ZHE5)
Other databases:
- EMBL: AF067228 - EMBL: AE013218 - RefSeq: NP_660453.1 - ProteinModelPortal: Q9ZHE5 - SMR: Q9ZHE5 - EnsemblBacteria: EBBUCT00000000472 - GeneID: 1005911 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg094 - GeneTree: EBGT00050000007997 - HOGENOM: HBG646350 - OMA: FKTLWDQ - ProtClustDB: PRK01688 - BioCyc: BAPH198804:BUSG094-MONOMER - HAMAP: MF_01023 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10 - TIGRFAMs: TIGR01141
Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major
EC number: =2.6.1.9
Molecular weight: Translated: 40474; Mature: 40343
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTANINKLARKNIQKLNPYQSARRIGGKGDTWLNANESPISVPFKGKVKVFNRYPECQPN CCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCEECCCCCCEEEECCCCCCCCH NLLSSYANYVGLLNNQILVTRGADEGIELLIKAFCEPGKDAIIYCPPTYDMYAINAKIAN HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEEEEE VEIKEIPTFKNTWKIDLLNIRSNLNKVKLIYICNPNNPTGNIVSQEDLKSLLKVTLGQSL EEHHHCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCEE VIIDEAYIEFSPKNSMVNYLKTFPNLIILRTLSKAFALAGIRCGFTLAQKEVIDILHKVI EEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH SPYPISTLIADIAVQSLEKKAIDDMKNRVLKLNMNRIWLIDELKKISCVKKVFDSHANYI CCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEHHHHHHHHHHHHHHHCCCCEE LVEFYMFKKIFQSLWQKGIILRNQNHKNNLKNCLRISIGSKSECMRLVQELKNFI EHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHEEECCCHHHHHHHHHHHHHCC >Mature Secondary Structure TANINKLARKNIQKLNPYQSARRIGGKGDTWLNANESPISVPFKGKVKVFNRYPECQPN CCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCEECCCCCCEEEECCCCCCCCH NLLSSYANYVGLLNNQILVTRGADEGIELLIKAFCEPGKDAIIYCPPTYDMYAINAKIAN HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEEEEE VEIKEIPTFKNTWKIDLLNIRSNLNKVKLIYICNPNNPTGNIVSQEDLKSLLKVTLGQSL EEHHHCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCEE VIIDEAYIEFSPKNSMVNYLKTFPNLIILRTLSKAFALAGIRCGFTLAQKEVIDILHKVI EEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH SPYPISTLIADIAVQSLEKKAIDDMKNRVLKLNMNRIWLIDELKKISCVKKVFDSHANYI CCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEHHHHHHHHHHHHHHHCCCCEE LVEFYMFKKIFQSLWQKGIILRNQNHKNNLKNCLRISIGSKSECMRLVQELKNFI EHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHEEECCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9767718; 12089438