Click here to switch to the map view.

The map label for this gene is Y098 [C]

Identifier: 21672383

GI number: 21672383

Start: 103730

End: 104260

Strand: Direct

Name: Y098 [C]

Synonym: BUsg091

Alternate gene names: 21672383

Gene position: 103730-104260 (Clockwise)

Preceding gene: 21672381

Following gene: 21672384

Centisome position: 16.17

GC content: 27.12

Gene sequence:

>531_bases
ATGAATAAAAATCGACAACTTGCTGTCAATAGCAATATTTTATTTCGTAAGTGGTTGAACGGCACCCGTGAAATGGTACA
GGATACTATATTTCATTCTCGATTACATAAAGTAAATCAAAAAATCCGATCTAAAAGAATGTTTTTTGAACAAGACGTTC
ATAGTAATTATTTTTCTTTTTATAAAAAAAAAGATTTTTTTAAAGAAAATCCTGTGTCTTATGTTCGGAATAAAGATTTC
ACCAATGTTTTAAAAAAATTAAAAAAAGGAAAATATTATCCAGATATATTTCTTGATTTACATGGTTTAAATCAATATCA
AGCAAGAAAAAAATTAGGTCAGCTGATTGCAATATGTCAAAAAGAAAAAATGTTTTGCGCTCATATTATGCATGGATATG
GTAAAAATATTTTAAAAAAACAAATACCTTTTTGGCTATCTCAACACCCTGATATAGTGGCTTTTCATCAAGCTCCTAAA
ATGTTTGGAAATGATGCAGCAATTATGGTTATCATTGAAATTCATTCTTAA

Upstream 100 bases:

>100_bases
ATTTGTTGTTTTTACAAAAACTAAATTATATAATTAAAAAATATATAAAAAAATATTAAATAAGATATGTAAATTTATTA
ATTTTTGGTAATACATTATT

Downstream 100 bases:

>100_bases
GTAAATATTTTATATATATTAAAATAATATTAATTTTTTATAAAATTTAATAATTATTAACATTTATTATTAATTTTTTA
AACTTTAAATAAATTTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MNKNRQLAVNSNILFRKWLNGTREMVQDTIFHSRLHKVNQKIRSKRMFFEQDVHSNYFSFYKKKDFFKENPVSYVRNKDF
TNVLKKLKKGKYYPDIFLDLHGLNQYQARKKLGQLIAICQKEKMFCAHIMHGYGKNILKKQIPFWLSQHPDIVAFHQAPK
MFGNDAAIMVIIEIHS

Sequences:

>Translated_176_residues
MNKNRQLAVNSNILFRKWLNGTREMVQDTIFHSRLHKVNQKIRSKRMFFEQDVHSNYFSFYKKKDFFKENPVSYVRNKDF
TNVLKKLKKGKYYPDIFLDLHGLNQYQARKKLGQLIAICQKEKMFCAHIMHGYGKNILKKQIPFWLSQHPDIVAFHQAPK
MFGNDAAIMVIIEIHS
>Mature_176_residues
MNKNRQLAVNSNILFRKWLNGTREMVQDTIFHSRLHKVNQKIRSKRMFFEQDVHSNYFSFYKKKDFFKENPVSYVRNKDF
TNVLKKLKKGKYYPDIFLDLHGLNQYQARKKLGQLIAICQKEKMFCAHIMHGYGKNILKKQIPFWLSQHPDIVAFHQAPK
MFGNDAAIMVIIEIHS

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Smr domain

Homologues:

Organism=Escherichia coli, GI1788671, Length=174, Percent_Identity=48.2758620689655, Blast_Score=176, Evalue=1e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y091_BUCAP (Q9ZHE8)

Other databases:

- EMBL:   AF067228
- EMBL:   AE013218
- RefSeq:   NP_660450.1
- ProteinModelPortal:   Q9ZHE8
- EnsemblBacteria:   EBBUCT00000000426
- GeneID:   1005908
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg091
- GeneTree:   EBGT00050000007911
- HOGENOM:   HBG700609
- OMA:   DIVAFHQ
- ProtClustDB:   PRK04946
- BioCyc:   BAPH198804:BUSG091-MONOMER
- HAMAP:   MF_01042
- InterPro:   IPR002625
- InterPro:   IPR022990
- SMART:   SM00463

Pfam domain/function: PF01713 Smr

EC number: NA

Molecular weight: Translated: 21010; Mature: 21010

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKNRQLAVNSNILFRKWLNGTREMVQDTIFHSRLHKVNQKIRSKRMFFEQDVHSNYFSF
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YKKKDFFKENPVSYVRNKDFTNVLKKLKKGKYYPDIFLDLHGLNQYQARKKLGQLIAICQ
HHHHHHHCCCCHHHHCCCCHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHH
KEKMFCAHIMHGYGKNILKKQIPFWLSQHPDIVAFHQAPKMFGNDAAIMVIIEIHS
HHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEECCCCHHHCCCCEEEEEEEECC
>Mature Secondary Structure
MNKNRQLAVNSNILFRKWLNGTREMVQDTIFHSRLHKVNQKIRSKRMFFEQDVHSNYFSF
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YKKKDFFKENPVSYVRNKDFTNVLKKLKKGKYYPDIFLDLHGLNQYQARKKLGQLIAICQ
HHHHHHHCCCCHHHHCCCCHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHH
KEKMFCAHIMHGYGKNILKKQIPFWLSQHPDIVAFHQAPKMFGNDAAIMVIIEIHS
HHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEECCCCHHHCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9767718; 12089438