Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
---|---|
Accession | NC_003919 |
Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21244731
Identifier: 21244731
GI number: 21244731
Start: 4704196
End: 4704738
Strand: Direct
Name: 21244731
Synonym: XAC4013
Alternate gene names: NA
Gene position: 4704196-4704738 (Clockwise)
Preceding gene: 21244730
Following gene: 21244732
Centisome position: 90.89
GC content: 63.54
Gene sequence:
>543_bases ATGAGTCTTCCAGCCAACAAGCTGGTGTTCGTCGGCGGCATGGGCGCCGGCAAGACCACCGCAGTGCGCTCCATCTCCGA TGTGGAGCCGGTCAGCACCGAAATGCCGCTCAGCCAGGACGCGTACGGCGACAAGACCTACACCACCGTCGCGCTGGACT ACAGCTCGATCGAGCTGGAAGACGGCGAGCTGCTGCATGTCTACGGTGTGCCAGGCCAGAAATACCTGGATTTCATGTGG CCGCTGGTGTGCGACGGTGCGCTGGGTGTGATCGTGCTGACCAACGCACGCGACCCGCAGATGCTCACAGCCACGCTGGA GTTGTTGCGCGAGTTTTCGCAGATCGCACCCGAGGCCAGCCTGGCGGTGGGCATCACCATGACCGATGAAGTCGAGGATT TCCTGGTGCCGCCCTTTCGCGAAGCCCTGGTGGCCGAAGGCTTCCGCGTGCCGGTCATGCGCGTGGATGCGCGCTCGGCC ACCCAGATCACCTTCCTGGTGAAATCGCTGCTGTCCTACCGCTACACCTCGGCGACCAGCTGA
Upstream 100 bases:
>100_bases TTCCCGTGCCTGCAACGCAGCGTCGCCCAGACGGCGGAAACACGCGGTTCTTTTCCTGGGTCGCACGTCGGTTCGGCCTT TCCCTCTTCCAGGGGCAGTC
Downstream 100 bases:
>100_bases TCGAAAGCGCGCCTGGCGCGGGCGCTGGGCACGGCAAGCAAGACAAGGAATCTGGTCACGACGGTGCCTGAGAGGGCGTC ACGCGGGGGATGCCGCCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MSLPANKLVFVGGMGAGKTTAVRSISDVEPVSTEMPLSQDAYGDKTYTTVALDYSSIELEDGELLHVYGVPGQKYLDFMW PLVCDGALGVIVLTNARDPQMLTATLELLREFSQIAPEASLAVGITMTDEVEDFLVPPFREALVAEGFRVPVMRVDARSA TQITFLVKSLLSYRYTSATS
Sequences:
>Translated_180_residues MSLPANKLVFVGGMGAGKTTAVRSISDVEPVSTEMPLSQDAYGDKTYTTVALDYSSIELEDGELLHVYGVPGQKYLDFMW PLVCDGALGVIVLTNARDPQMLTATLELLREFSQIAPEASLAVGITMTDEVEDFLVPPFREALVAEGFRVPVMRVDARSA TQITFLVKSLLSYRYTSATS >Mature_179_residues SLPANKLVFVGGMGAGKTTAVRSISDVEPVSTEMPLSQDAYGDKTYTTVALDYSSIELEDGELLHVYGVPGQKYLDFMWP LVCDGALGVIVLTNARDPQMLTATLELLREFSQIAPEASLAVGITMTDEVEDFLVPPFREALVAEGFRVPVMRVDARSAT QITFLVKSLLSYRYTSATS
Specific function: Unknown
COG id: COG2229
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19578; Mature: 19446
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPANKLVFVGGMGAGKTTAVRSISDVEPVSTEMPLSQDAYGDKTYTTVALDYSSIELE CCCCCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCEEEEC DGELLHVYGVPGQKYLDFMWPLVCDGALGVIVLTNARDPQMLTATLELLREFSQIAPEAS CCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCC LAVGITMTDEVEDFLVPPFREALVAEGFRVPVMRVDARSATQITFLVKSLLSYRYTSATS EEEEEEECCCHHHHCCCCHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SLPANKLVFVGGMGAGKTTAVRSISDVEPVSTEMPLSQDAYGDKTYTTVALDYSSIELE CCCCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCEEEEC DGELLHVYGVPGQKYLDFMWPLVCDGALGVIVLTNARDPQMLTATLELLREFSQIAPEAS CCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCC LAVGITMTDEVEDFLVPPFREALVAEGFRVPVMRVDARSATQITFLVKSLLSYRYTSATS EEEEEEECCCHHHHCCCCHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA