Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21244730
Identifier: 21244730
GI number: 21244730
Start: 4703282
End: 4704199
Strand: Direct
Name: 21244730
Synonym: XAC4012
Alternate gene names: NA
Gene position: 4703282-4704199 (Clockwise)
Preceding gene: 21244729
Following gene: 21244731
Centisome position: 90.87
GC content: 67.43
Gene sequence:
>918_bases ATGACTACACCCATCAACGCCATGCGGGTCGCCACGGCCGGCCTGGACCTGCTGCACACCACACGCCTGAAACTGGCGTG CTCGCTGCTGCTCGCCGAACGCATCGACGTGCAGTTGGGCCAATGGCCGCAGCACGCAGCCGATGTGGTGGTACTGGGCC TGGACAGCGCCGATGGCCTGGCCGCCTGGCAGGCATTGCAGGGGCAACCGGTGCGTGTGCTGGTGGTGTCGCGCACGCCC ATGGCCGGCGCGTGGATCAAGCACGGCGCCACCGTGCGCGAACTCAACGAACACATGCGCCTGCTGTTGTCCTCGCCGCA CGCCACCCCGGTCGCGGAGCCGGCATTGCTGCTGCGGTATTGCCGCGGCGAATTCGGTGCCGGCGCAGTGACGCTGCAGC ATGCGCAGTTGCACGTGCGTGTGGACCCGAGCAATGGTTGCGTGCAGTTGCCGGCTGGCGTGGCGCTGGCGGAGGTGATC GCCGCGCTGGACCGCTCGGGCTGGCACGTCGTGTCCGACCTTGCCGCGACCGCGTTACCCCAACGCATTTCCTTCGAAGC GCTGTTTTTCGCCCTGCCCGAGCATCTGCGCCAGGCGCTGCCGGCAGTGGAACCCGGGCATGCGCTGCAATTGCGCCAGT GGCCGGAGTTGACTGCAGAAACCAGTTCGCCAGCCCAGTTGCTGGCCATTGCCCACCTGCATGCACGCCCCTGGCGCCCG CAGGCGCTGGCCAATGCTTGCAAGCTGCCGCTGCAAACGGTGGAATGCCTGTTCGCCGCTGCACTTGCCAGCGGCCTCGC CCAGACTGCGGAGATTCCCGTGCCTGCAACGCAGCGTCGCCCAGACGGCGGAAACACGCGGTTCTTTTCCTGGGTCGCAC GTCGGTTCGGCCTTTCCCTCTTCCAGGGGCAGTCATGA
Upstream 100 bases:
>100_bases TTGATGCCGACAGCGCGCTGCCAGCGCATCGCCTGATCCAGCCTGCCGGTGCTGACCGGCAGGCATCTCGTCATCCAATG CGCCGCCACCGCGCCAGCTC
Downstream 100 bases:
>100_bases GTCTTCCAGCCAACAAGCTGGTGTTCGTCGGCGGCATGGGCGCCGGCAAGACCACCGCAGTGCGCTCCATCTCCGATGTG GAGCCGGTCAGCACCGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MTTPINAMRVATAGLDLLHTTRLKLACSLLLAERIDVQLGQWPQHAADVVVLGLDSADGLAAWQALQGQPVRVLVVSRTP MAGAWIKHGATVRELNEHMRLLLSSPHATPVAEPALLLRYCRGEFGAGAVTLQHAQLHVRVDPSNGCVQLPAGVALAEVI AALDRSGWHVVSDLAATALPQRISFEALFFALPEHLRQALPAVEPGHALQLRQWPELTAETSSPAQLLAIAHLHARPWRP QALANACKLPLQTVECLFAAALASGLAQTAEIPVPATQRRPDGGNTRFFSWVARRFGLSLFQGQS
Sequences:
>Translated_305_residues MTTPINAMRVATAGLDLLHTTRLKLACSLLLAERIDVQLGQWPQHAADVVVLGLDSADGLAAWQALQGQPVRVLVVSRTP MAGAWIKHGATVRELNEHMRLLLSSPHATPVAEPALLLRYCRGEFGAGAVTLQHAQLHVRVDPSNGCVQLPAGVALAEVI AALDRSGWHVVSDLAATALPQRISFEALFFALPEHLRQALPAVEPGHALQLRQWPELTAETSSPAQLLAIAHLHARPWRP QALANACKLPLQTVECLFAAALASGLAQTAEIPVPATQRRPDGGNTRFFSWVARRFGLSLFQGQS >Mature_304_residues TTPINAMRVATAGLDLLHTTRLKLACSLLLAERIDVQLGQWPQHAADVVVLGLDSADGLAAWQALQGQPVRVLVVSRTPM AGAWIKHGATVRELNEHMRLLLSSPHATPVAEPALLLRYCRGEFGAGAVTLQHAQLHVRVDPSNGCVQLPAGVALAEVIA ALDRSGWHVVSDLAATALPQRISFEALFFALPEHLRQALPAVEPGHALQLRQWPELTAETSSPAQLLAIAHLHARPWRPQ ALANACKLPLQTVECLFAAALASGLAQTAEIPVPATQRRPDGGNTRFFSWVARRFGLSLFQGQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32815; Mature: 32684
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPINAMRVATAGLDLLHTTRLKLACSLLLAERIDVQLGQWPQHAADVVVLGLDSADGL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHH AAWQALQGQPVRVLVVSRTPMAGAWIKHGATVRELNEHMRLLLSSPHATPVAEPALLLRY HHHHHHCCCCEEEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH CRGEFGAGAVTLQHAQLHVRVDPSNGCVQLPAGVALAEVIAALDRSGWHVVSDLAATALP HCCCCCCCEEEEEEEEEEEEECCCCCEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHCC QRISFEALFFALPEHLRQALPAVEPGHALQLRQWPELTAETSSPAQLLAIAHLHARPWRP HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCH QALANACKLPLQTVECLFAAALASGLAQTAEIPVPATQRRPDGGNTRFFSWVARRFGLSL HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHH FQGQS HCCCC >Mature Secondary Structure TTPINAMRVATAGLDLLHTTRLKLACSLLLAERIDVQLGQWPQHAADVVVLGLDSADGL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHH AAWQALQGQPVRVLVVSRTPMAGAWIKHGATVRELNEHMRLLLSSPHATPVAEPALLLRY HHHHHHCCCCEEEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH CRGEFGAGAVTLQHAQLHVRVDPSNGCVQLPAGVALAEVIAALDRSGWHVVSDLAATALP HCCCCCCCEEEEEEEEEEEEECCCCCEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHCC QRISFEALFFALPEHLRQALPAVEPGHALQLRQWPELTAETSSPAQLLAIAHLHARPWRP HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCH QALANACKLPLQTVECLFAAALASGLAQTAEIPVPATQRRPDGGNTRFFSWVARRFGLSL HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHH FQGQS HCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA