Click here to switch to the map view.

The map label for this gene is srpA [H]

Identifier: 21244708

GI number: 21244708

Start: 4681613

End: 4682704

Strand: Direct

Name: srpA [H]

Synonym: XAC3990

Alternate gene names: 21244708

Gene position: 4681613-4682704 (Clockwise)

Preceding gene: 21244705

Following gene: 21244709

Centisome position: 90.46

GC content: 67.77

Gene sequence:

>1092_bases
ATGACGTTGCCACCTCCTTCGCCCCCGCGCGCACGCAGCCCCGTGCTGCCCTTGTTGGGGATTGCCGCCATTGCCGGCGG
CATTGCGCTGGCGTTTGCCTGGACGGCCGGCTGGATCGGTGGCGACCGGCTCACTGCCGCACGTATGACCGACACCATCG
AATCCAGCGGGCCGCCGCATCCGGGCTTCCGCCGCGCGCATACCAAGGGCGTGTGCGTGAGCGGGCAATTCCAGTCCAGC
GGCAAGGCCACCTGGCTGTCGTCGGCACGCATCTTCAGCCAGCCCAGCACGCCGGTGCTGGGGCGCATGTCGATCGGCGG
CGGCGATCCGCACGGGCCCGACGGGCAGGCGCGCGTGCGCAGCATGGCGCTGCTGTTGCGCAGCGACGATGGGCAGGAAT
GGCGCACGGCGATGAACAGTTTTCCGTTCTTCGTGGTCGCCACGCCGGCCGGCTTTCAGGCACTCAACGTGGCCTCCAGG
CCGGACCCGGCCACCGGCAAGCCGGACCCCGAAAAACTGGCGGCGTTCGGCAAGCAGTATCCGGAAGCGGCCAAGTTCCA
GCAGTGGGCCAAGACCGCGCCGTGGTCGGACAGCTGGGCCAATACGCAGTACAACGGCGTCAATGCGTTCCGCGCGATTG
CCGCCGATGGGCGCGAACGCTACATCCGCTGGTCGATGCGCCCGCATACGCCATTCAAGGAATTGAACGCCGAACAACGC
AAGCAGGCCGATGGCGATTTCCTCGCCACCGACCTGGACGCGCGGCTGGCGCAGGGGCCGTTGCGTTGGGACATGGTGCT
GACCATTGCCGAGCCCGGCGATGCGGTGGATGACCCGTCGCAGCCGTGGCCGGACAGCCGCAAGCAGATCGTGGCCGGTA
CGCTCTCGATCGAGCGTGCGCAGCCGCAGGCCACCGGCCCGTGTCGCGATCTCAATTACGACCCGTTGATCTTGCCCAAG
GGTCTGGCCGCATCGAATGACCCGATACTGGCGGCGCGCTCGTCGGTGTATTCGCAATCGTTCAATCGCCGCGAACACGA
GATCGCCAATGGCACGGGCAGCGCCGCCACCGGCCAGGGAGCACGCCAATGA

Upstream 100 bases:

>100_bases
TCGGTGCGTGCCACCGTCGTTGGTGGACGAGGGAATAACGCGGCCCGCATGTCGTCTCACTCATCTCAACCACTCACAGT
ATCGACCACCGGAGCCAGCC

Downstream 100 bases:

>100_bases
GCCGCCGCACCCACTTCAATCTGCCGGCGCGCGTGCTGCATTGGCTGATGGCCGCGATGATCCTGACCATGCTGTTCGTC
GGTGTCGGCATGGTAGCCTC

Product: catalase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MTLPPPSPPRARSPVLPLLGIAAIAGGIALAFAWTAGWIGGDRLTAARMTDTIESSGPPHPGFRRAHTKGVCVSGQFQSS
GKATWLSSARIFSQPSTPVLGRMSIGGGDPHGPDGQARVRSMALLLRSDDGQEWRTAMNSFPFFVVATPAGFQALNVASR
PDPATGKPDPEKLAAFGKQYPEAAKFQQWAKTAPWSDSWANTQYNGVNAFRAIAADGRERYIRWSMRPHTPFKELNAEQR
KQADGDFLATDLDARLAQGPLRWDMVLTIAEPGDAVDDPSQPWPDSRKQIVAGTLSIERAQPQATGPCRDLNYDPLILPK
GLAASNDPILAARSSVYSQSFNRREHEIANGTGSAATGQGARQ

Sequences:

>Translated_363_residues
MTLPPPSPPRARSPVLPLLGIAAIAGGIALAFAWTAGWIGGDRLTAARMTDTIESSGPPHPGFRRAHTKGVCVSGQFQSS
GKATWLSSARIFSQPSTPVLGRMSIGGGDPHGPDGQARVRSMALLLRSDDGQEWRTAMNSFPFFVVATPAGFQALNVASR
PDPATGKPDPEKLAAFGKQYPEAAKFQQWAKTAPWSDSWANTQYNGVNAFRAIAADGRERYIRWSMRPHTPFKELNAEQR
KQADGDFLATDLDARLAQGPLRWDMVLTIAEPGDAVDDPSQPWPDSRKQIVAGTLSIERAQPQATGPCRDLNYDPLILPK
GLAASNDPILAARSSVYSQSFNRREHEIANGTGSAATGQGARQ
>Mature_362_residues
TLPPPSPPRARSPVLPLLGIAAIAGGIALAFAWTAGWIGGDRLTAARMTDTIESSGPPHPGFRRAHTKGVCVSGQFQSSG
KATWLSSARIFSQPSTPVLGRMSIGGGDPHGPDGQARVRSMALLLRSDDGQEWRTAMNSFPFFVVATPAGFQALNVASRP
DPATGKPDPEKLAAFGKQYPEAAKFQQWAKTAPWSDSWANTQYNGVNAFRAIAADGRERYIRWSMRPHTPFKELNAEQRK
QADGDFLATDLDARLAQGPLRWDMVLTIAEPGDAVDDPSQPWPDSRKQIVAGTLSIERAQPQATGPCRDLNYDPLILPKG
LAASNDPILAARSSVYSQSFNRREHEIANGTGSAATGQGARQ

Specific function: Unknown

COG id: COG0753

COG function: function code P; Catalase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the catalase family [H]

Homologues:

Organism=Homo sapiens, GI4557014, Length=297, Percent_Identity=23.9057239057239, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71998444, Length=297, Percent_Identity=22.8956228956229, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI19920968, Length=295, Percent_Identity=23.728813559322, Blast_Score=72, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020835
- InterPro:   IPR018028
- InterPro:   IPR011614 [H]

Pfam domain/function: PF00199 Catalase [H]

EC number: NA

Molecular weight: Translated: 39020; Mature: 38889

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPPPSPPRARSPVLPLLGIAAIAGGIALAFAWTAGWIGGDRLTAARMTDTIESSGPPH
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHCCCCCC
PGFRRAHTKGVCVSGQFQSSGKATWLSSARIFSQPSTPVLGRMSIGGGDPHGPDGQARVR
CCCHHHCCCCEEEECCCCCCCCEEEECCHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHH
SMALLLRSDDGQEWRTAMNSFPFFVVATPAGFQALNVASRPDPATGKPDPEKLAAFGKQY
HHHHHHCCCCCHHHHHHHHCCCEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCC
PEAAKFQQWAKTAPWSDSWANTQYNGVNAFRAIAADGRERYIRWSMRPHTPFKELNAEQR
CHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCHHHCCHHHH
KQADGDFLATDLDARLAQGPLRWDMVLTIAEPGDAVDDPSQPWPDSRKQIVAGTLSIERA
HCCCCCEEEECHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECC
QPQATGPCRDLNYDPLILPKGLAASNDPILAARSSVYSQSFNRREHEIANGTGSAATGQG
CCCCCCCCCCCCCCCEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
ARQ
CCC
>Mature Secondary Structure 
TLPPPSPPRARSPVLPLLGIAAIAGGIALAFAWTAGWIGGDRLTAARMTDTIESSGPPH
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHCCCCCC
PGFRRAHTKGVCVSGQFQSSGKATWLSSARIFSQPSTPVLGRMSIGGGDPHGPDGQARVR
CCCHHHCCCCEEEECCCCCCCCEEEECCHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHH
SMALLLRSDDGQEWRTAMNSFPFFVVATPAGFQALNVASRPDPATGKPDPEKLAAFGKQY
HHHHHHCCCCCHHHHHHHHCCCEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCC
PEAAKFQQWAKTAPWSDSWANTQYNGVNAFRAIAADGRERYIRWSMRPHTPFKELNAEQR
CHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCHHHCCHHHH
KQADGDFLATDLDARLAQGPLRWDMVLTIAEPGDAVDDPSQPWPDSRKQIVAGTLSIERA
HCCCCCEEEECHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECC
QPQATGPCRDLNYDPLILPKGLAASNDPILAARSSVYSQSFNRREHEIANGTGSAATGQG
CCCCCCCCCCCCCCCEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
ARQ
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7536734 [H]